Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0127G021 Amborella trichopoda HOM05D007438 ORTHO05D009395 1.7e-120 436.0 217 100.0
MBI06_g16570_MAGBIO Magnolia biondii HOM05D007438 ORTHO05D009395 8.7e-45 184.5 225 47.6
SEGI_11984 Sequoiadendron giganteum HOM05D007438 ORTHO05D009395 1.1e-44 184.1 225 46.2
Nn3g21054 Nelumbo nucifera HOM05D007438 ORTHO05D009395 1.3e-43 180.6 225 45.8
GSVIVG01020783001 Vitis vinifera HOM05D007438 ORTHO05D009395 5.5e-39 165.2 221 43.4
TAR629G3405 Trochodendron aralioides HOM05D007438 ORTHO05D009395 6.0e-38 161.8 222 43.7
Aqoxy1G01934 Aquilegia oxysepala HOM05D007438 ORTHO05D009395 1.8e-37 160.2 222 45.0
Sabra14G0106800 Salix brachista HOM05D007438 ORTHO05D009395 9.6e-36 154.5 225 41.8
Thecc.01G156400 Theobroma cacao HOM05D007438 ORTHO05D009395 1.1e-34 151.0 229 45.0
Cfa021395 Carpinus fangiana HOM05D007438 ORTHO05D009395 1.4e-34 150.6 218 42.2
Dinv11426 Davidia involucrata HOM05D007438 ORTHO05D009395 1.4e-34 150.6 260 39.2
CiPaw.03G193300 Carya illinoinensis HOM05D007438 ORTHO05D009395 3.1e-34 149.4 254 38.2
Cpa.g.sc50.57 Carica papaya HOM05D007438 ORTHO05D009395 4.0e-34 149.1 223 39.5
COL.COLO4_33655 Corchorus olitorius HOM05D007438 ORTHO05D009395 4.0e-34 149.1 225 40.0
PGSC0003DMG401017288 Solanum tuberosum HOM05D007438 ORTHO05D009395 2.0e-33 146.7 219 40.6
CSS0044063 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 3.4e-33 146.0 222 42.8
QL08p043052 Quercus lobata HOM05D007438 ORTHO05D009395 5.8e-33 145.2 262 37.0
Medtr5g091960 Medicago truncatula HOM05D007438 ORTHO05D009395 1.0e-32 144.4 222 40.5
Potri.014G141500 Populus trichocarpa HOM05D007438 ORTHO05D009395 2.2e-32 143.3 224 41.5
vmacro09194 Vaccinium macrocarpon HOM05D007438 ORTHO05D009395 3.8e-32 142.5 222 38.3
CSS0040852 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 4.9e-32 142.1 222 42.8
Gohir.A09G003800 Gossypium hirsutum HOM05D007438 ORTHO05D009395 1.1e-31 141.0 218 39.9
Gorai.006G004700 Gossypium raimondii HOM05D007438 ORTHO05D009395 2.5e-31 139.8 218 40.4
SalBow7G1752 Salvia bowleyana HOM05D007438 ORTHO05D009395 3.2e-31 139.4 218 41.3
Eucgr.A01949 Eucalyptus grandis HOM05D007438 ORTHO05D009395 5.5e-31 138.7 222 39.6
Gohir.D09G003400 Gossypium hirsutum HOM05D007438 ORTHO05D009395 5.5e-31 138.7 218 40.4
Ca_06297_v3 Cicer arietinum L. HOM05D007438 ORTHO05D009395 1.2e-30 137.5 222 39.6
Duzib264G0748 Durio zibethinus HOM05D007438 ORTHO05D009395 1.6e-30 137.1 225 40.0
Lj3C1012T3 Lonicera japonica HOM05D007438 ORTHO05D009395 2.1e-30 136.7 237 40.5
Cc05_g09010 Coffea canephora HOM05D007438 ORTHO05D009395 3.5e-30 136.0 222 38.3
Glyma.02G288700 Glycine max HOM05D007438 ORTHO05D009395 4.6e-30 135.6 224 39.3
Peaxi162Scf00154g01024 Petunia axillaris HOM05D007438 ORTHO05D009395 4.6e-30 135.6 217 38.2
CAN.G803.12 Capsicum annuum HOM05D007438 ORTHO05D009395 7.9e-30 134.8 218 39.4
MSTRG.6772 Avicennia marina HOM05D007438 ORTHO05D009395 1.0e-29 134.4 223 37.7
Glyma.14G026100 Glycine max HOM05D007438 ORTHO05D009395 1.3e-29 134.0 222 37.8
EL10Ac9g21031 Beta vulgaris HOM05D007438 ORTHO05D009395 2.3e-29 133.3 236 36.0
TPR.G12671 Trifolium pratense HOM05D007438 ORTHO05D009395 5.1e-29 132.1 223 37.7
Actinidia30518 Actinidia chinensis HOM05D007438 ORTHO05D009395 1.1e-28 131.0 233 40.8
DCAR_013288 Daucus carota HOM05D007438 ORTHO05D009395 1.1e-28 131.0 220 39.5
Ciclev10016256m.g Citrus clementina HOM05D007438 ORTHO05D009395 1.5e-28 130.6 225 38.2
Sopen07g029090 Solanum pennellii HOM05D007438 ORTHO05D009395 1.5e-28 130.6 218 38.5
VMungo1215G1664 Vigna mungo HOM05D007438 ORTHO05D009395 1.9e-28 130.2 220 40.0
PGR042G1218 Punica granatum HOM05D007438 ORTHO05D009395 2.5e-28 129.8 226 36.7
Lalb_Chr10g0106871 Lupinus albus HOM05D007438 ORTHO05D009395 3.3e-28 129.4 221 35.7
Sed0004780 Sechium edule HOM05D007438 ORTHO05D009395 1.6e-27 127.1 224 40.2
LjContig00310g0012276 Lotus japonicus HOM05D007438 ORTHO05D009395 2.1e-27 126.7 220 39.1
Prupe.3G108500 Prunus persica HOM05D007438 ORTHO05D009395 2.1e-27 126.7 209 37.8
Rhsim04G0081300 Rhododendron simsii HOM05D007438 ORTHO05D009395 2.1e-27 126.7 227 39.2
ClCG09G022220 Citrullus lanatus HOM05D007438 ORTHO05D009395 2.8e-27 126.3 221 38.5
Nitab4.5_0005259g0040 Nicotiana tabacum HOM05D007438 ORTHO05D009395 2.8e-27 126.3 228 36.8
MELO3C014451.2 Cucumis melo HOM05D007438 ORTHO05D009395 6.3e-27 125.2 216 37.5
AUR62031789 Chenopodium quinoa HOM05D007438 ORTHO05D009395 1.1e-26 124.4 231 37.7
arahy.Tifrunner.gnm1.ann1.2XI8FI Arachis hypogaea HOM05D007438 ORTHO05D009395 2.4e-26 123.2 230 36.1
arahy.Tifrunner.gnm1.ann1.9R49YU Arachis hypogaea HOM05D007438 ORTHO05D009395 2.4e-26 123.2 230 36.1
Nitab4.5_0003133g0060 Nicotiana tabacum HOM05D007438 ORTHO05D009395 3.1e-26 122.9 219 37.9
Solyc07g055720.4 Solanum lycopersicum HOM05D007438 ORTHO05D009395 3.1e-26 122.9 218 37.6
TWI74G0447 Tripterygium wilfordii HOM05D007438 ORTHO05D009395 2.6e-25 119.8 223 38.6
CSS0035465 Camellia sinensis var. sinensis HOM05D007438 ORTHO05D009395 3.4e-25 119.4 245 35.9
Migut.M00210 Erythranthe guttata HOM05D007438 ORTHO05D009395 3.4e-25 119.4 216 36.1
CANSAT64G1631 Cannabis sativa HOM05D007438 ORTHO05D009395 7.6e-25 118.2 252 33.3
Phvul.008G264700 Phaseolus vulgaris HOM05D007438 ORTHO05D009395 1.0e-24 117.9 169 39.1
SMO111G0151 Selaginella moellendorffii HOM05D007438 ORTHO05D009395 1.0e-24 117.9 217 34.6
arahy.Tifrunner.gnm1.ann1.K6S8U8 Arachis hypogaea HOM05D007438 ORTHO05D009395 5.0e-24 115.5 221 35.7
TAR626G1821 Trochodendron aralioides HOM05D007438 ORTHO05D009395 6.5e-24 115.2 174 42.5
Manes.01G129800 Manihot esculenta HOM05D007438 ORTHO05D009395 8.5e-24 114.8 227 35.2
CsaV3_6G037900 Cucumis sativus L. HOM05D007438 ORTHO05D009395 1.4e-23 114.0 216 35.2
AUR62023994 Chenopodium quinoa HOM05D007438 ORTHO05D009395 2.5e-23 113.2 231 35.1
Hund07732 Selenicereus undatus HOM05D007438 ORTHO05D009395 2.5e-23 113.2 232 33.6
Psat2g015640 Pisum sativum HOM05D007438 ORTHO05D009395 9.3e-23 111.3 223 35.0
Atru.chr6.3569 Acer truncatum HOM05D007438 ORTHO05D009395 1.2e-22 110.9 235 34.0
Lsat_1_v5_gn_4_26780 Lactuca sativa HOM05D007438 ORTHO05D009395 1.2e-22 110.9 223 35.9
Nitab4.5_0011473g0010 Nicotiana tabacum HOM05D007438 ORTHO05D009395 2.7e-22 109.8 181 37.6
Carub.0001s0582 Capsella rubella HOM05D007438 ORTHO05D009395 1.0e-21 107.8 260 29.2
Mapoly0109s0048 Marchantia polymorpha HOM05D007438 ORTHO05D009395 1.8e-21 107.1 253 32.4
HPP92_021771 Vanilla planifolia HOM05D007438 ORTHO05D009395 5.1e-21 105.5 222 33.3
arahy.Tifrunner.gnm1.ann1.AN6F3M Arachis hypogaea HOM05D007438 ORTHO05D009395 3.7e-19 99.4 161 39.8
Sp1g05220 Schrenkiella parvula HOM05D007438 ORTHO05D009395 4.8e-19 99.0 255 31.0
Sc21g0004330 Simmondsia chinensis HOM05D007438 ORTHO05D009395 6.3e-19 98.6 90 52.2
THA.LOC104800831 Tarenaya hassleriana HOM05D007438 ORTHO05D009395 6.3e-19 98.6 220 33.6
A10p05120 Brassica napus HOM05D007438 ORTHO05D009395 1.4e-18 97.4 249 30.1
ECA234G1517 Erigeron canadensis HOM05D007438 ORTHO05D009395 4.1e-18 95.9 221 29.9
BolC5t29243H Brassica oleracea HOM05D007438 ORTHO05D009395 1.5e-17 94.0 260 29.2
CARHR006070 Cardamine hirsuta HOM05D007438 ORTHO05D009395 3.4e-17 92.8 238 30.7
AL1G16470 Arabidopsis lyrata HOM05D007438 ORTHO05D009395 4.5e-17 92.4 235 31.1
AT1G06460 Arabidopsis thaliana HOM05D007438 ORTHO05D009395 1.3e-16 90.9 234 30.8
Aa31LG1G7510 Aethionema arabicum HOM05D007438 ORTHO05D009395 1.7e-16 90.5 216 31.9
C05p04710 Brassica napus HOM05D007438 ORTHO05D009395 2.9e-16 89.7 249 28.9
BraA10t42777Z Brassica rapa HOM05D007438 ORTHO05D009395 2.9e-16 89.7 250 29.6
BcaB02g06796 Brassica carinata HOM05D007438 ORTHO05D009395 3.2e-15 86.3 251 29.5
A08p35960 Brassica napus HOM05D007438 ORTHO05D009395 2.1e-14 83.6 92 42.4
BraA08t35504Z Brassica rapa HOM05D007438 ORTHO05D009395 2.1e-14 83.6 254 29.1
HanXRQChr01g0028661 Helianthus annuus HOM05D007438 ORTHO05D009395 2.7e-14 83.2 222 31.5
Thhalv10008353m.g Eutrema salsugineum HOM05D007438 ORTHO05D009395 7.9e-14 81.6 129 37.2
Pp3c2_23860 Physcomitrium patens HOM05D007438 ORTHO05D009395 1.1e-12 77.8 174 33.3
C08p02600 Brassica napus HOM05D007438 ORTHO05D009395 2.6e-12 76.6 232 27.6
BolC8t47053H Brassica oleracea HOM05D007438 ORTHO05D009395 5.7e-12 75.5 243 28.8
arahy.Tifrunner.gnm1.ann1.28WURV Arachis hypogaea HOM05D007438 ORTHO05D009395 1.4e-10 70.9 73 49.3
BcaB03g13417 Brassica carinata HOM05D000181 ORTHO05D002783 1.5e-09 67.4 232 27.2
Haze_13451 Corylus avellana HOM05D007438 ORTHO05D009395 2.5e-07 60.1 121 35.5
SEGI_23493 Sequoiadendron giganteum HOM05D000136 ORTHO05D026137 7.9e-06 55.1 92 28.3


User provided reference genes

Program Settings