Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0124G054 Amborella trichopoda HOM05D003795 ORTHO05D004308 0.0e+00 1106.7 679 100.0
Zm00001eb427110 Zea mays HOM05D003795 ORTHO05D004308 5.2e-19 100.5 494 30.8
QL02p056567 Quercus lobata HOM05D003795 ORTHO05D004308 1.4e-16 92.4 556 30.9
Duzib138G1939 Durio zibethinus HOM05D003795 ORTHO05D004308 1.8e-16 92.0 574 29.1
MBI06_g17214_MAGBIO Magnolia biondii HOM05D003795 ORTHO05D004308 2.4e-16 91.7 521 30.1
QL02p055515 Quercus lobata HOM05D003795 ORTHO05D004308 4.1e-16 90.9 556 31.5
TWI74G0163 Tripterygium wilfordii HOM05D003795 ORTHO05D004308 2.7e-15 88.2 582 32.6
THA.LOC104805668 Tarenaya hassleriana HOM05D003795 ORTHO05D004308 2.9e-14 84.7 513 32.9
LjContig00141g0025814 Lotus japonicus HOM05D003795 ORTHO05D004308 1.5e-13 82.4 574 32.8
Haze_14040 Corylus avellana HOM05D003795 ORTHO05D004308 1.9e-13 82.0 583 30.9
HPP92_013140 Vanilla planifolia HOM05D003795 ORTHO05D004308 1.9e-13 82.0 529 28.9
HanXRQChr14g0443551 Helianthus annuus HOM05D003795 ORTHO05D004308 2.5e-13 81.6 515 28.3
Oeu012502.2 Olea europaea HOM05D003795 ORTHO05D004308 4.2e-13 80.9 496 28.6
Phvul.008G243000 Phaseolus vulgaris HOM05D003795 ORTHO05D004308 4.2e-13 80.9 533 28.0
Psat2g048640 Pisum sativum HOM05D003795 ORTHO05D004308 4.2e-13 80.9 535 27.3
Potri.012G145200 Populus trichocarpa HOM05D003795 ORTHO05D004308 4.2e-13 80.9 590 30.0
Sabra12G0109200 Salix brachista HOM05D003795 ORTHO05D004308 3.6e-12 77.8 600 28.5
RcHm_v2.0_Chr7g0242011 Rosa chinensis HOM05D003795 ORTHO05D004308 6.1e-12 77.0 549 29.7
Thecc.04G056400 Theobroma cacao HOM05D003795 ORTHO05D004308 6.1e-12 77.0 596 28.7
VMungo0647G0124 Vigna mungo HOM05D003795 ORTHO05D004308 6.1e-12 77.0 535 27.9
Zm00001eb075920 Zea mays HOM05D003795 ORTHO05D004308 1.0e-11 76.3 500 29.4
Manes.02G083300 Manihot esculenta HOM05D003795 ORTHO05D004308 1.8e-11 75.5 582 28.9
Glyma.14G207900 Glycine max HOM05D003795 ORTHO05D004308 2.3e-11 75.1 538 27.5
Os04g0528600 Oryza sativa ssp. japonica HOM05D003795 ORTHO05D004308 2.3e-11 75.1 483 31.1
CSS0049356 Camellia sinensis var. sinensis HOM05D003795 ORTHO05D004308 3.0e-11 74.7 562 33.1
Ah.06g191370 Amaranthus hybridus HOM05D003795 ORTHO05D004308 5.2e-11 73.9 544 30.3
CANSAT78G1023 Cannabis sativa HOM05D003795 ORTHO05D004308 5.2e-11 73.9 485 34.2
Ca_05735_v3 Cicer arietinum L. HOM05D003795 ORTHO05D004308 6.8e-11 73.6 560 30.7
TPR.G15394 Trifolium pratense HOM05D003795 ORTHO05D004308 6.8e-11 73.6 532 30.3
Medtr5g076140 Medicago truncatula HOM05D003795 ORTHO05D004308 8.8e-11 73.2 561 26.4
Sabra15G0156700 Salix brachista HOM05D003795 ORTHO05D004308 1.2e-10 72.8 563 28.2
Lsat_1_v5_gn_2_72041 Lactuca sativa HOM05D003795 ORTHO05D004308 1.5e-10 72.4 505 35.4
Manes.01G125700 Manihot esculenta HOM05D003795 ORTHO05D004308 2.6e-10 71.6 573 26.9
Gohir.A11G170300 Gossypium hirsutum HOM05D003795 ORTHO05D004308 4.4e-10 70.9 558 26.0
Peaxi162Scf00344g00199 Petunia axillaris HOM05D003795 ORTHO05D004308 5.7e-10 70.5 528 28.2
Dinv28269 Davidia involucrata HOM05D003795 ORTHO05D004308 7.5e-10 70.1 576 30.2
SalBow5G4136 Salvia bowleyana HOM05D003795 ORTHO05D004308 7.5e-10 70.1 489 30.1
FvH4_5g39710 Fragaria vesca HOM05D003795 ORTHO05D004308 9.8e-10 69.7 556 26.4
DCAR_014135 Daucus carota HOM05D003795 ORTHO05D004308 1.7e-09 68.9 562 31.9
TWI77G0024 Tripterygium wilfordii HOM05D003795 ORTHO05D004308 2.8e-09 68.2 568 32.0
PSO063G2224 Papaver somniferum HOM05D003795 ORTHO05D004308 3.7e-09 67.8 546 25.8
Ah.04g162800 Amaranthus hybridus HOM05D003795 ORTHO05D004308 6.3e-09 67.0 571 24.9
CiPaw.03G010000 Carya illinoinensis HOM05D003795 ORTHO05D004308 6.3e-09 67.0 590 30.7
Nn4g24995 Nelumbo nucifera HOM05D003795 ORTHO05D004308 6.3e-09 67.0 557 29.1
Gohir.D11G177300 Gossypium hirsutum HOM05D003795 ORTHO05D004308 8.3e-09 66.6 528 26.1
SEGI_22138 Sequoiadendron giganteum HOM05D003795 ORTHO05D004308 8.3e-09 66.6 620 26.6
CARHR057540 Cardamine hirsuta HOM05D003795 ORTHO05D004308 1.1e-08 66.2 455 32.7
Rhsim10G0186600 Rhododendron simsii HOM05D003795 ORTHO05D004308 1.1e-08 66.2 530 32.8
FAN18G0662 Fragaria x ananassa HOM05D003795 ORTHO05D004308 1.4e-08 65.9 549 26.4
FAN18G1276 Fragaria x ananassa HOM05D003795 ORTHO05D004308 1.4e-08 65.9 549 26.4
Potri.015G147900 Populus trichocarpa HOM05D003795 ORTHO05D004308 1.4e-08 65.9 588 32.1
FAN04G0804 Fragaria x ananassa HOM05D003795 ORTHO05D004308 1.8e-08 65.5 529 27.6
FAN08G2134 Fragaria x ananassa HOM05D003795 ORTHO05D004308 1.8e-08 65.5 556 26.3
Gorai.007G189400 Gossypium raimondii HOM05D003795 ORTHO05D004308 1.8e-08 65.5 528 26.5
PSO782G2347 Papaver somniferum HOM05D003795 ORTHO05D004308 1.8e-08 65.5 539 28.4
Oeu041416.1 Olea europaea HOM05D003795 ORTHO05D004308 2.4e-08 65.1 520 26.2
Glyma.11G202800 Glycine max HOM05D003795 ORTHO05D004308 3.1e-08 64.7 573 28.6
VMungo0540G0009 Vigna mungo HOM05D003795 ORTHO05D004308 4.1e-08 64.3 695 27.2
COL.COLO4_13440 Corchorus olitorius HOM05D003795 ORTHO05D004308 7.0e-08 63.5 504 27.4
AUR62010626 Chenopodium quinoa HOM05D003795 ORTHO05D004308 1.2e-07 62.8 99 47.5
Migut.K01203 Erythranthe guttata HOM05D003795 ORTHO05D004308 1.2e-07 62.8 498 32.5
HanXRQChr12g0365641 Helianthus annuus HOM05D003795 ORTHO05D004308 1.2e-07 62.8 259 31.7
MELO3C025107.2 Cucumis melo HOM05D003795 ORTHO05D004308 2.0e-07 62.0 511 26.8
Nn4g24993 Nelumbo nucifera HOM05D003795 ORTHO05D004308 3.5e-07 61.2 682 29.0
Atru.chr1.2190 Acer truncatum HOM05D003795 ORTHO05D004308 4.5e-07 60.8 126 41.3
Phvul.006G083400 Phaseolus vulgaris HOM05D003795 ORTHO05D004308 4.5e-07 60.8 701 27.2
TAR629G1700 Trochodendron aralioides HOM05D003795 ORTHO05D004308 5.9e-07 60.5 454 29.7
GSVIVG01033197001 Vitis vinifera HOM05D003795 ORTHO05D004308 5.9e-07 60.5 379 28.8
Glyma.02G239000 Glycine max HOM05D003795 ORTHO05D004308 7.7e-07 60.1 509 26.3
Aqoxy3G04352 Aquilegia oxysepala HOM05D003795 ORTHO05D004308 1.0e-06 59.7 529 25.7
Cpa.g.sc108.20 Carica papaya HOM05D003795 ORTHO05D004308 1.3e-06 59.3 584 30.8
Nitab4.5_0012787g0030 Nicotiana tabacum HOM05D003795 ORTHO05D004308 1.7e-06 58.9 523 24.1


User provided reference genes

Program Settings