Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 2.0e-53 212.2 112 100.0
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 1.0e-25 120.2 112 58.0
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 6.7e-25 117.5 113 56.6
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 6.7e-25 117.5 113 56.6
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 1.5e-24 116.3 80 72.5
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 9.7e-24 113.6 114 62.3
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 1.3e-23 113.2 108 59.3
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 2.2e-23 112.5 109 59.6
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 2.2e-23 112.5 83 65.1
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 4.8e-23 111.3 95 62.1
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 6.3e-23 110.9 79 73.4
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 8.2e-23 110.5 79 70.9
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 1.8e-22 109.4 80 71.2
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 2.4e-22 109.0 75 66.7
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 2.4e-22 109.0 75 69.3
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 2.4e-22 109.0 75 69.3
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 2.4e-22 109.0 79 70.9
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 3.1e-22 108.6 76 72.4
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 4.1e-22 108.2 112 56.2
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 5.3e-22 107.8 75 68.0
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 7.0e-22 107.5 75 70.7
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 9.1e-22 107.1 122 52.5
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 9.1e-22 107.1 83 67.5
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 1.2e-21 106.7 103 60.2
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 1.2e-21 106.7 87 62.1
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 1.2e-21 106.7 115 60.0
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 1.2e-21 106.7 79 69.6
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 1.6e-21 106.3 80 67.5
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 1.6e-21 106.3 75 70.7
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 2.0e-21 105.9 79 69.6
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 2.0e-21 105.9 106 56.6
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 2.6e-21 105.5 107 55.1
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 4.5e-21 104.8 124 50.8
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 4.5e-21 104.8 124 50.8
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 5.9e-21 104.4 89 56.2
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 5.9e-21 104.4 84 59.5
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 5.9e-21 104.4 113 56.6
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 5.9e-21 104.4 106 54.7
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 7.7e-21 104.0 75 68.0
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 7.7e-21 104.0 75 69.3
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 7.7e-21 104.0 101 57.4
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 1.0e-20 103.6 79 64.6
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 1.0e-20 103.6 101 57.4
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 1.3e-20 103.2 109 54.1
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 1.3e-20 103.2 83 67.5
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 1.7e-20 102.8 110 53.6
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 1.7e-20 102.8 113 55.8
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 1.7e-20 102.8 113 55.8
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 1.7e-20 102.8 79 67.1
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 2.2e-20 102.4 89 56.2
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 2.2e-20 102.4 75 68.0
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 2.9e-20 102.1 109 55.0
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 2.9e-20 102.1 81 64.2
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 3.8e-20 101.7 79 64.6
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 3.8e-20 101.7 110 50.0
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 6.5e-20 100.9 114 53.5
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 6.5e-20 100.9 95 56.8
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 8.5e-20 100.5 102 54.9
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 8.5e-20 100.5 82 63.4
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 8.5e-20 100.5 106 52.8
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 1.1e-19 100.1 69 73.9
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 1.5e-19 99.8 84 65.5
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 1.9e-19 99.4 75 66.7
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 2.5e-19 99.0 105 49.5
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 2.5e-19 99.0 83 61.4
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 5.5e-19 97.8 80 61.2
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 5.5e-19 97.8 78 55.1
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 7.2e-19 97.4 84 59.5
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 7.2e-19 97.4 103 57.3
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 1.2e-18 96.7 88 60.2
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 1.6e-18 96.3 97 56.7
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 2.1e-18 95.9 91 59.3
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 2.7e-18 95.5 75 62.7
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 2.7e-18 95.5 100 52.0
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 3.6e-18 95.1 88 59.1
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 3.6e-18 95.1 97 55.7
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 3.6e-18 95.1 97 55.7
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 4.7e-18 94.7 97 56.7
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 4.7e-18 94.7 80 58.8
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 4.7e-18 94.7 72 63.9
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 4.7e-18 94.7 87 59.8
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 6.1e-18 94.4 89 61.8
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 6.1e-18 94.4 97 56.7
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 6.1e-18 94.4 90 57.8
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 8.0e-18 94.0 124 46.0
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 1.0e-17 93.6 71 66.2
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 1.0e-17 93.6 71 63.4
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 1.4e-17 93.2 99 51.5
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 1.8e-17 92.8 100 51.0
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 1.8e-17 92.8 102 53.9
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 1.8e-17 92.8 75 64.0
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 1.8e-17 92.8 75 64.0
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 1.8e-17 92.8 120 45.0
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 2.3e-17 92.4 84 60.7
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 2.3e-17 92.4 75 62.7
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 4.0e-17 91.7 120 48.3
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 4.0e-17 91.7 120 48.3
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 4.0e-17 91.7 120 48.3
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 6.7e-17 90.9 86 59.3
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 8.8e-17 90.5 86 59.3
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 8.8e-17 90.5 94 55.3
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 8.8e-17 90.5 63 71.4
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 8.8e-17 90.5 63 71.4
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 1.5e-16 89.7 120 46.7
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 2.0e-16 89.4 90 48.9
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 2.6e-16 89.0 58 70.7
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 7.5e-16 87.4 96 56.2
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 4.8e-15 84.7 75 60.0
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 1.8e-14 82.8 60 71.7
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 1.8e-14 82.8 61 70.5
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 1.8e-14 82.8 62 67.7
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 1.2e-13 80.1 62 64.5
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 3.2e-11 72.0 113 39.8
Hma1.2p1_0816F.1_g222980 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 1.8e-09 66.2 57 61.4
COL.COLO4_37022 Corchorus olitorius HOM05D006666 ORTHO05D008276 3.0e-09 65.5 52 67.3
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 8.8e-09 63.9 47 55.3
Cre03.g203800 Chlamydomonas reinhardtii HOM05D006666 ORTHO05D008276 7.5e-08 60.8 79 39.2


User provided reference genes

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