Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0124G030 Amborella trichopoda HOM05D004801 ORTHO05D005747 2.6e-105 385.6 222 100.0
Gohir.A03G156300 Gossypium hirsutum HOM05D004801 ORTHO05D005747 8.6e-24 114.8 79 68.4
Gohir.D02G179400 Gossypium hirsutum HOM05D004801 ORTHO05D005747 8.6e-24 114.8 79 68.4
Thecc.02G180400 Theobroma cacao HOM05D004801 ORTHO05D005747 1.5e-23 114.0 77 68.8
EL10Ac9g20770 Beta vulgaris HOM05D004801 ORTHO05D005747 1.9e-23 113.6 77 68.8
Nitab4.5_0000585g0130 Nicotiana tabacum HOM05D004801 ORTHO05D005747 3.3e-23 112.8 76 65.8
Nitab4.5_0011784g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 3.3e-23 112.8 76 65.8
ClCG00G003550 Citrullus lanatus HOM05D004801 ORTHO05D005747 4.3e-23 112.5 79 65.8
ClCG07G002870 Citrullus lanatus HOM05D004801 ORTHO05D005747 4.3e-23 112.5 79 65.8
COL.COLO4_30200 Corchorus olitorius HOM05D004801 ORTHO05D005747 4.3e-23 112.5 77 67.5
Gorai.005G201200 Gossypium raimondii HOM05D004801 ORTHO05D005747 4.3e-23 112.5 79 67.1
Gorai.012G128300 Gossypium raimondii HOM05D004801 ORTHO05D005747 4.3e-23 112.5 77 67.5
Lsat_1_v5_gn_8_135921 Lactuca sativa HOM05D004801 ORTHO05D005747 7.3e-23 111.7 79 65.8
Ca_01496_v3 Cicer arietinum L. HOM05D004801 ORTHO05D005747 9.6e-23 111.3 76 67.1
Cc05_g07190 Coffea canephora HOM05D004801 ORTHO05D005747 9.6e-23 111.3 77 66.2
Hma1.2p1_0002F.1_g001940 Hydrangea macrophylla HOM05D004801 ORTHO05D005747 9.6e-23 111.3 77 68.8
SGA_v2.0_scaffold34G13950 Striga asiatica HOM05D004801 ORTHO05D005747 1.2e-22 110.9 79 64.6
CAN.G578.5 Capsicum annuum HOM05D004801 ORTHO05D005747 2.1e-22 110.2 76 68.4
CiPaw.03G177800 Carya illinoinensis HOM05D004801 ORTHO05D005747 2.1e-22 110.2 77 64.9
CsaV3_7G004470 Cucumis sativus L. HOM05D004801 ORTHO05D005747 2.1e-22 110.2 77 66.2
Gohir.A04G103500 Gossypium hirsutum HOM05D004801 ORTHO05D005747 2.1e-22 110.2 77 66.2
VMungo0464G1438 Vigna mungo HOM05D004801 ORTHO05D005747 2.1e-22 110.2 77 64.9
vmacro12308 Vaccinium macrocarpon HOM05D004801 ORTHO05D005747 2.8e-22 109.8 77 66.2
MSTRG.14326 Avicennia marina HOM05D004801 ORTHO05D005747 3.6e-22 109.4 79 64.6
MELO3C018732.2 Cucumis melo HOM05D004801 ORTHO05D005747 3.6e-22 109.4 77 66.2
Duzib248G0607 Durio zibethinus HOM05D004801 ORTHO05D005747 3.6e-22 109.4 184 39.1
Medtr2g090385 Medicago truncatula HOM05D004801 ORTHO05D005747 3.6e-22 109.4 76 64.5
ECA234G0944 Erigeron canadensis HOM05D004801 ORTHO05D005747 4.7e-22 109.0 79 63.3
Actinidia11029 Actinidia chinensis HOM05D004801 ORTHO05D005747 6.2e-22 108.6 77 64.9
Rhsim06G0141800 Rhododendron simsii HOM05D004801 ORTHO05D005747 6.2e-22 108.6 77 64.9
Gohir.D04G142900 Gossypium hirsutum HOM05D004801 ORTHO05D005747 8.1e-22 108.2 77 66.2
SalBow1G6004 Salvia bowleyana HOM05D004801 ORTHO05D005747 8.1e-22 108.2 79 63.3
Dinv26411 Davidia involucrata HOM05D004801 ORTHO05D005747 1.1e-21 107.8 77 64.9
FAN02G2956 Fragaria x ananassa HOM05D004801 ORTHO05D005747 1.1e-21 107.8 71 70.4
FAN09G3815 Fragaria x ananassa HOM05D004801 ORTHO05D005747 1.1e-21 107.8 71 70.4
Lj3g0028176 Lotus japonicus HOM05D004801 ORTHO05D005747 1.1e-21 107.8 77 64.9
Manes.13G146300 Manihot esculenta HOM05D004801 ORTHO05D005747 1.1e-21 107.8 75 68.0
MSTRG.12824 Avicennia marina HOM05D004801 ORTHO05D005747 1.4e-21 107.5 77 63.6
TAR626G1782 Trochodendron aralioides HOM05D004801 ORTHO05D005747 1.4e-21 107.5 77 62.3
Atru.chr6.2990 Acer truncatum HOM05D004801 ORTHO05D005747 1.8e-21 107.1 77 66.2
arahy.Tifrunner.gnm1.ann1.G6M6JD Arachis hypogaea HOM05D004801 ORTHO05D005747 1.8e-21 107.1 79 62.0
arahy.Tifrunner.gnm1.ann1.KJ31KE Arachis hypogaea HOM05D004801 ORTHO05D005747 1.8e-21 107.1 79 62.0
FvH4_6g26250 Fragaria vesca HOM05D004801 ORTHO05D005747 1.8e-21 107.1 71 70.4
TWI36G1772 Tripterygium wilfordii HOM05D004801 ORTHO05D005747 1.8e-21 107.1 79 62.0
GSVIVG01020552001 Vitis vinifera HOM05D004801 ORTHO05D005747 1.8e-21 107.1 77 63.6
Lalb_Chr14g0366971 Lupinus albus HOM05D004801 ORTHO05D005747 2.4e-21 106.7 79 60.8
QL08p038965 Quercus lobata HOM05D004801 ORTHO05D005747 2.4e-21 106.7 77 62.3
Sed0002865 Sechium edule HOM05D004801 ORTHO05D005747 2.4e-21 106.7 77 62.3
CSS0019593 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 3.1e-21 106.3 77 66.2
SalBow1G1046 Salvia bowleyana HOM05D004801 ORTHO05D005747 3.1e-21 106.3 79 63.3
Sopen10g004180 Solanum pennellii HOM05D004801 ORTHO05D005747 4.0e-21 105.9 231 34.6
Glyma.12G204500 Glycine max HOM05D004801 ORTHO05D005747 5.2e-21 105.5 209 40.7
Solyc10g008320.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 5.2e-21 105.5 231 34.6
Phvul.004G108100 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 6.9e-21 105.1 206 34.5
HanXRQChr17g0559281 Helianthus annuus HOM05D004801 ORTHO05D005747 8.9e-21 104.8 79 60.8
Cfa014619 Carpinus fangiana HOM05D004801 ORTHO05D005747 1.2e-20 104.4 77 63.6
Nitab4.5_0000638g0250 Nicotiana tabacum HOM05D004801 ORTHO05D005747 1.2e-20 104.4 175 41.1
Dinv23632 Davidia involucrata HOM05D004801 ORTHO05D005747 1.5e-20 104.0 108 48.1
Duzib132G1264 Durio zibethinus HOM05D004801 ORTHO05D005747 2.0e-20 103.6 77 64.9
Migut.M00296 Erythranthe guttata HOM05D004801 ORTHO05D005747 2.0e-20 103.6 77 62.3
Eucgr.A01822 Eucalyptus grandis HOM05D004801 ORTHO05D005747 2.0e-20 103.6 76 64.5
Peaxi162Scf00132g00008 Petunia axillaris HOM05D004801 ORTHO05D005747 2.6e-20 103.2 78 64.1
VMungo0464G0320 Vigna mungo HOM05D004801 ORTHO05D005747 2.6e-20 103.2 76 61.8
MBI18_g28947_MAGBIO Magnolia biondii HOM05D004801 ORTHO05D005747 3.4e-20 102.8 135 45.2
Potri.013G130700 Populus trichocarpa HOM05D004801 ORTHO05D005747 3.4e-20 102.8 75 66.7
Sabra13G0110300 Salix brachista HOM05D004801 ORTHO05D005747 3.4e-20 102.8 77 63.6
Haze_13169 Corylus avellana HOM05D004801 ORTHO05D005747 4.4e-20 102.4 124 46.0
Psat5g270840 Pisum sativum HOM05D004801 ORTHO05D005747 4.4e-20 102.4 70 65.7
RcHm_v2.0_Chr2g0126621 Rosa chinensis HOM05D004801 ORTHO05D005747 4.4e-20 102.4 71 67.6
Sed0013547 Sechium edule HOM05D004801 ORTHO05D005747 4.4e-20 102.4 222 36.0
Glyma.13G296700 Glycine max HOM05D004801 ORTHO05D005747 1.3e-19 100.9 222 32.9
Psat5g272360 Pisum sativum HOM05D004801 ORTHO05D005747 1.3e-19 100.9 70 67.1
Oeu019133.1 Olea europaea HOM05D004801 ORTHO05D005747 1.7e-19 100.5 227 36.1
Phvul.004G108200 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 1.7e-19 100.5 186 41.4
PGSC0003DMG400013144 Solanum tuberosum HOM05D004801 ORTHO05D005747 1.7e-19 100.5 221 35.7
SGA_v2.0_scaffold70G23526 Striga asiatica HOM05D004801 ORTHO05D005747 1.7e-19 100.5 77 61.0
Ah.08g215280 Amaranthus hybridus HOM05D004801 ORTHO05D005747 2.2e-19 100.1 217 31.8
Ciclev10016785m.g Citrus clementina HOM05D004801 ORTHO05D005747 2.2e-19 100.1 79 63.3
PSO170G5688 Papaver somniferum HOM05D004801 ORTHO05D005747 2.2e-19 100.1 84 59.5
Peaxi162Scf00059g00194 Petunia axillaris HOM05D004801 ORTHO05D005747 2.2e-19 100.1 216 33.8
AUR62040063 Chenopodium quinoa HOM05D004801 ORTHO05D005747 2.9e-19 99.8 77 58.4
Prupe.3G132500 Prunus persica HOM05D004801 ORTHO05D005747 2.9e-19 99.8 71 66.2
SHI10398 Sapria himalayana HOM05D004801 ORTHO05D005747 2.9e-19 99.8 75 62.7
TPR.G6396 Trifolium pratense HOM05D004801 ORTHO05D005747 2.9e-19 99.8 164 39.0
AUR62022461 Chenopodium quinoa HOM05D004801 ORTHO05D005747 4.9e-19 99.0 77 58.4
Nitab4.5_0014741g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 4.9e-19 99.0 175 38.3
AT4G28310 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 8.4e-19 98.2 77 57.1
Glyma.12G204600 Glycine max HOM05D004801 ORTHO05D005747 1.1e-18 97.8 251 34.3
PGR042G3918 Punica granatum HOM05D004801 ORTHO05D005747 1.1e-18 97.8 74 62.2
Sc21g0002890 Simmondsia chinensis HOM05D004801 ORTHO05D005747 1.1e-18 97.8 235 36.2
THA.LOC104824700 Tarenaya hassleriana HOM05D004801 ORTHO05D005747 1.1e-18 97.8 220 35.5
Aqoxy4G01981 Aquilegia oxysepala HOM05D004801 ORTHO05D005747 1.9e-18 97.1 77 58.4
Glyma.13G296800 Glycine max HOM05D004801 ORTHO05D005747 1.9e-18 97.1 76 60.5
BcaC09g50492 Brassica carinata HOM05D004801 ORTHO05D005747 3.2e-18 96.3 77 58.4
C01p24790 Brassica napus HOM05D004801 ORTHO05D005747 3.2e-18 96.3 77 58.4
BolC1t02426H Brassica oleracea HOM05D004801 ORTHO05D005747 3.2e-18 96.3 77 58.4
BraA08t33972Z Brassica rapa HOM05D004801 ORTHO05D005747 3.2e-18 96.3 75 60.0
unitig_46.g18595 Utricularia gibba HOM05D004801 ORTHO05D005747 3.2e-18 96.3 77 59.7
AL7G24290 Arabidopsis lyrata HOM05D004801 ORTHO05D005747 4.2e-18 95.9 77 57.1
Cpa.g.sc34.170 Carica papaya HOM05D004801 ORTHO05D005747 4.2e-18 95.9 143 42.0
Thhalv10027270m.g Eutrema salsugineum HOM05D004801 ORTHO05D005747 4.2e-18 95.9 75 57.3
MD17G1239900 Malus domestica HOM05D004801 ORTHO05D005747 4.2e-18 95.9 73 58.9
PSO357G0555 Papaver somniferum HOM05D004801 ORTHO05D005747 5.4e-18 95.5 84 56.0
A08p20130 Brassica napus HOM05D004801 ORTHO05D005747 9.3e-18 94.7 75 58.7
BraA01t01904Z Brassica rapa HOM05D004801 ORTHO05D005747 9.3e-18 94.7 75 58.7
Carub.0007s1244 Capsella rubella HOM05D004801 ORTHO05D005747 9.3e-18 94.7 75 57.3
HPP92_008364 Vanilla planifolia HOM05D004801 ORTHO05D005747 9.3e-18 94.7 225 33.8
BcaB03g12566 Brassica carinata HOM05D004801 ORTHO05D005747 1.2e-17 94.4 75 58.7
BcaNung01577 Brassica carinata HOM05D004801 ORTHO05D005747 1.2e-17 94.4 77 57.1
Lsat_1_v5_gn_8_135941 Lactuca sativa HOM05D004801 ORTHO05D005747 2.1e-17 93.6 69 63.8
Sopen07g027930 Solanum pennellii HOM05D004801 ORTHO05D005747 2.1e-17 93.6 76 59.2
Os06g0115700 Oryza sativa ssp. japonica HOM05D004801 ORTHO05D005747 3.5e-17 92.8 74 59.5
Zm00001eb269130 Zea mays HOM05D004801 ORTHO05D005747 4.6e-17 92.4 74 59.5
Lalb_Chr24g0399901 Lupinus albus HOM05D004801 ORTHO05D005747 6.0e-17 92.0 221 32.6
Aa31LG10G480 Aethionema arabicum HOM05D004801 ORTHO05D005747 7.8e-17 91.7 75 57.3
DCAR_013013 Daucus carota HOM05D004801 ORTHO05D005747 1.0e-16 91.3 222 32.0
Aa31LG2G22170 Aethionema arabicum HOM05D004801 ORTHO05D005747 2.3e-16 90.1 198 31.3
CSS0042810 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 2.3e-16 90.1 79 58.2
Solyc07g053950.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 6.6e-16 88.6 76 57.9
unitig_37.g12306 Utricularia gibba HOM05D004801 ORTHO05D005747 6.6e-16 88.6 200 32.5
CARHR236030 Cardamine hirsuta HOM05D004801 ORTHO05D005747 1.1e-15 87.8 217 33.2
BolC8t48753H Brassica oleracea HOM05D004801 ORTHO05D005747 1.9e-15 87.0 219 35.2
SEGI_29524 Sequoiadendron giganteum HOM05D004801 ORTHO05D005747 2.5e-15 86.7 232 32.3
BcaC07g38324 Brassica carinata HOM05D004801 ORTHO05D005747 4.3e-15 85.9 223 33.6
C08p10790 Brassica napus HOM05D004801 ORTHO05D005747 4.3e-15 85.9 223 33.6
Sp7g26270 Schrenkiella parvula HOM05D004801 ORTHO05D005747 4.3e-15 85.9 218 32.6
PGSC0003DMG400018341 Solanum tuberosum HOM05D004801 ORTHO05D005747 5.6e-15 85.5 221 33.5
AagrBONN_evm.TU.Sc2ySwM_344.3370 Anthoceros agrestis HOM05D004801 ORTHO05D005747 1.3e-14 84.3 74 54.1
BcaC06g32627 Brassica carinata HOM05D004801 ORTHO05D005747 1.3e-14 84.3 202 31.2
BcaC06g32628 Brassica carinata HOM05D004801 ORTHO05D005747 1.3e-14 84.3 202 31.2
Mapoly0078s0017 Marchantia polymorpha HOM05D004801 ORTHO05D005747 1.6e-14 84.0 69 58.0
Pp3c17_13330 Physcomitrium patens HOM05D004801 ORTHO05D005747 1.4e-13 80.9 75 54.7
A03p58010 Brassica napus HOM05D004801 ORTHO05D005747 3.1e-13 79.7 77 50.6
BraA03t14864Z Brassica rapa HOM05D004801 ORTHO05D005747 3.1e-13 79.7 77 50.6
Lj1P721T18 Lonicera japonica HOM05D004801 ORTHO05D005747 3.1e-13 79.7 62 58.1
C07p56130 Brassica napus HOM05D004801 ORTHO05D005747 9.0e-13 78.2 77 49.4
BolC7t46088H Brassica oleracea HOM05D004801 ORTHO05D005747 1.5e-12 77.4 77 49.4
Pp3c14_12710 Physcomitrium patens HOM05D004801 ORTHO05D005747 3.4e-12 76.3 75 52.0


User provided reference genes

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