Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 1.0e-198 696.4 322 100.0
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 1.9e-149 532.7 319 74.6
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 1.5e-146 523.1 321 72.0
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 2.0e-146 522.7 318 71.1
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 2.0e-146 522.7 319 71.8
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 5.8e-146 521.2 318 70.8
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 2.9e-145 518.8 318 71.1
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 2.9e-145 518.8 320 71.6
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 1.1e-144 516.9 319 70.8
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 1.1e-144 516.9 318 72.0
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 1.4e-144 516.5 318 72.3
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 1.4e-144 516.5 318 70.4
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.4e-144 516.5 318 70.4
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 2.4e-144 515.8 318 70.4
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 4.2e-144 515.0 318 71.7
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 9.3e-144 513.8 319 70.5
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 1.6e-143 513.1 320 70.0
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 4.6e-143 511.5 318 70.1
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 7.9e-143 510.8 322 68.3
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 7.9e-143 510.8 321 70.1
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 7.9e-143 510.8 318 68.9
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 7.9e-143 510.8 319 69.9
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 1.3e-142 510.0 322 70.5
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 1.7e-142 509.6 318 69.8
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 1.7e-142 509.6 319 67.4
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 3.0e-142 508.8 318 70.1
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 6.6e-142 507.7 321 70.7
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 8.7e-142 507.3 316 71.2
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 8.7e-142 507.3 318 70.1
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 1.5e-141 506.5 305 74.8
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 1.5e-141 506.5 320 68.8
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 2.5e-141 505.8 319 69.9
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 2.5e-141 505.8 318 69.2
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 2.5e-141 505.8 318 68.2
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 3.3e-141 505.4 318 70.4
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 5.6e-141 504.6 306 74.2
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 7.3e-141 504.2 306 72.9
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 9.6e-141 503.8 304 71.1
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 1.3e-140 503.4 318 69.5
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 1.3e-140 503.4 319 70.2
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 1.6e-140 503.1 318 69.5
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 2.1e-140 502.7 318 71.1
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 8.1e-140 500.7 321 68.8
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 8.1e-140 500.7 318 70.1
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 1.1e-139 500.4 319 69.9
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 1.4e-139 500.0 319 69.0
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.4e-139 500.0 320 70.0
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.8e-139 499.6 318 69.8
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.8e-139 499.6 318 69.8
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 5.3e-139 498.0 316 68.7
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 5.3e-139 498.0 321 68.8
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 9.0e-139 497.3 316 68.7
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 9.0e-139 497.3 321 67.9
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 1.2e-138 496.9 320 68.4
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 2.0e-138 496.1 318 68.6
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 2.6e-138 495.7 313 69.0
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 4.5e-138 495.0 321 67.6
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 4.5e-138 495.0 323 67.2
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 4.5e-138 495.0 318 69.2
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 1.3e-137 493.4 321 67.6
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 1.7e-137 493.0 316 69.0
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.7e-137 493.0 319 67.7
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 1.7e-137 493.0 321 68.8
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.7e-137 493.0 311 69.5
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 1.7e-137 493.0 321 67.6
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 2.2e-137 492.7 316 69.9
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 2.9e-137 492.3 319 69.0
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 2.9e-137 492.3 319 69.0
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 3.8e-137 491.9 320 66.9
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 8.4e-137 490.7 322 68.0
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 8.4e-137 490.7 306 72.5
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 1.1e-136 490.3 318 65.7
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 1.9e-136 489.6 318 66.7
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 1.9e-136 489.6 318 68.6
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 1.9e-136 489.6 306 70.6
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 3.2e-136 488.8 308 69.5
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 4.2e-136 488.4 318 67.9
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 4.2e-136 488.4 320 68.8
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 5.4e-136 488.0 322 68.0
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 9.3e-136 487.3 318 67.0
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 1.2e-135 486.9 305 71.8
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 6.0e-135 484.6 319 68.0
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 7.9e-135 484.2 321 65.7
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 1.8e-134 483.0 319 67.1
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 1.8e-134 483.0 301 70.1
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 3.0e-134 482.3 319 67.4
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 3.9e-134 481.9 318 67.6
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 6.7e-134 481.1 318 67.3
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 1.1e-133 480.3 315 67.9
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 1.1e-133 480.3 321 66.0
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 1.9e-133 479.6 320 65.3
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 3.3e-133 478.8 319 66.5
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 3.3e-133 478.8 317 65.9
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 5.6e-133 478.0 319 66.1
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 1.3e-132 476.9 318 65.7
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 1.6e-132 476.5 307 67.4
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 2.8e-132 475.7 305 66.9
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 2.8e-132 475.7 318 66.4
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 6.2e-132 474.6 310 67.1
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 8.1e-132 474.2 318 64.8
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.0e-131 471.9 318 65.1
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 2.6e-130 469.2 309 65.0
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 2.6e-130 469.2 309 65.4
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 3.4e-130 468.8 319 64.3
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 5.8e-130 468.0 304 67.8
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 1.7e-129 466.5 303 66.3
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 1.7e-129 466.5 304 67.4
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 1.7e-129 466.5 303 66.3
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.2e-129 466.1 306 66.3
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 2.9e-129 465.7 309 66.0
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 1.1e-128 463.8 304 67.1
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 2.5e-128 462.6 303 66.0
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 1.2e-127 460.3 304 66.8
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.6e-127 459.9 309 63.4
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 2.1e-127 459.5 303 66.0
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 2.1e-127 459.5 309 64.4
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.7e-127 459.1 314 64.3
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 1.8e-126 456.4 319 64.3
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 1.9e-125 453.0 302 63.9
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 1.9e-125 453.0 289 68.5
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.6e-124 449.9 288 68.4
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.8e-124 448.4 295 65.8
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 3.4e-122 442.2 316 63.6
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 1.3e-121 440.3 275 69.5
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 3.8e-121 438.7 315 61.9
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 6.5e-121 438.0 304 64.8
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 8.4e-121 437.6 320 61.6
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.6e-119 433.3 320 58.4
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 4.6e-119 431.8 289 65.4
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 1.8e-118 429.9 316 61.4
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 1.9e-117 426.4 317 59.6
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 7.2e-112 407.9 320 57.2
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 6.1e-111 404.8 315 59.4
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 1.0e-110 404.1 305 59.7
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.5e-109 400.2 285 61.8
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 5.9e-106 388.3 323 57.3
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 5.9e-106 388.3 323 57.3
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 5.3e-99 365.2 225 70.2
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 9.1e-99 364.4 303 55.8
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 5.9e-98 361.7 216 71.8
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 1.9e-96 356.7 315 50.8
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 2.9e-89 332.8 307 50.5
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 2.6e-77 293.1 268 55.2
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.0e-69 266.9 306 44.1
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 6.4e-68 261.9 182 64.3
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.2e-61 241.1 257 48.2
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 2.4e-51 206.8 127 70.1
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 7.3e-48 195.3 134 66.4
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 3.8e-44 183.0 309 35.0
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 4.6e-42 176.0 117 65.0
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 3.3e-40 169.9 304 33.9
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.3e-31 141.4 96 62.5
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 8.4e-28 128.6 338 28.4
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 6.0e-26 122.5 236 32.6
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 6.0e-18 95.9 58 74.1
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 8.4e-12 75.5 74 52.7


User provided reference genes

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