Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0121G005 Amborella trichopoda HOM05D003443 ORTHO05D008640 4.9e-88 327.8 169 100.0
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 2.0e-28 129.8 130 56.2
CSS0034050 Camellia sinensis var. sinensis HOM05D003443 ORTHO05D008640 9.8e-28 127.5 134 55.2
Nn4g26023 Nelumbo nucifera HOM05D003443 ORTHO05D008640 1.3e-27 127.1 130 56.2
Cpa.g.sc70.11 Carica papaya HOM05D003443 ORTHO05D008640 4.9e-27 125.2 134 52.2
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 8.3e-27 124.4 127 53.5
Atru.chr13.1408 Acer truncatum HOM05D003443 ORTHO05D008640 3.2e-26 122.5 128 53.9
FAN15G0021 Fragaria x ananassa HOM05D003443 ORTHO05D008640 3.2e-26 122.5 138 52.9
MBI06_g44272_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 3.2e-26 122.5 121 56.2
MBI15_g35999_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 3.2e-26 122.5 121 56.2
PSO170G0931 Papaver somniferum HOM05D003443 ORTHO05D008640 4.1e-26 122.1 123 57.7
Thecc.08G121300 Theobroma cacao HOM05D003443 ORTHO05D008640 4.1e-26 122.1 135 54.1
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 5.4e-26 121.7 135 54.8
Sabra02G0067600 Salix brachista HOM05D003443 ORTHO05D008640 9.2e-26 120.9 130 53.1
CiPaw.05G224500 Carya illinoinensis HOM05D003443 ORTHO05D008640 1.6e-25 120.2 131 53.4
Thhalv10029053m.g Eutrema salsugineum HOM05D003443 ORTHO05D008640 2.0e-25 119.8 125 52.0
Haze_00480 Corylus avellana HOM05D003443 ORTHO05D008640 2.7e-25 119.4 128 52.3
Peaxi162Scf00198g00098 Petunia axillaris HOM05D003443 ORTHO05D008640 3.5e-25 119.0 122 52.5
QL08p024382 Quercus lobata HOM05D003443 ORTHO05D008640 3.5e-25 119.0 126 54.8
AT4G08240 Arabidopsis thaliana HOM05D003443 ORTHO05D008640 4.6e-25 118.6 124 53.2
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 4.6e-25 118.6 131 52.7
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 4.6e-25 118.6 131 52.7
AL6G41970 Arabidopsis lyrata HOM05D003443 ORTHO05D008640 6.0e-25 118.2 124 53.2
Manes.18G075200 Manihot esculenta HOM05D003443 ORTHO05D008640 7.8e-25 117.9 135 51.9
Potri.002G086200 Populus trichocarpa HOM05D003443 ORTHO05D008640 7.8e-25 117.9 132 52.3
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 1.7e-24 116.7 131 51.1
Lalb_Chr10g0101911 Lupinus albus HOM05D003443 ORTHO05D008640 1.7e-24 116.7 129 51.2
Aa31LG9G14320 Aethionema arabicum HOM05D003443 ORTHO05D008640 3.0e-24 115.9 123 51.2
Ciclev10002759m.g Citrus clementina HOM05D003443 ORTHO05D008640 3.0e-24 115.9 128 52.3
Psat2g087720 Pisum sativum HOM05D003443 ORTHO05D008640 3.0e-24 115.9 128 50.0
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 3.0e-24 115.9 121 51.2
Medtr5g058660 Medicago truncatula HOM05D003443 ORTHO05D008640 3.9e-24 115.5 133 48.9
Medtr5g059030 Medicago truncatula HOM05D003443 ORTHO05D008640 3.9e-24 115.5 133 48.9
Peaxi162Scf00395g00717 Petunia axillaris HOM05D003443 ORTHO05D008640 3.9e-24 115.5 122 51.6
RcHm_v2.0_Chr6g0295401 Rosa chinensis HOM05D003443 ORTHO05D008640 3.9e-24 115.5 121 53.7
FAN24G2127 Fragaria x ananassa HOM05D003443 ORTHO05D008640 5.0e-24 115.2 129 51.9
Prupe.1G501600 Prunus persica HOM05D003443 ORTHO05D008640 5.0e-24 115.2 131 51.1
BcaB01g02870 Brassica carinata HOM05D003443 ORTHO05D008640 8.6e-24 114.4 122 50.0
BraA03t12014Z Brassica rapa HOM05D003443 ORTHO05D008640 8.6e-24 114.4 122 50.0
CARHR259340 Cardamine hirsuta HOM05D003443 ORTHO05D008640 8.6e-24 114.4 124 50.0
Ca_26970_v3 Cicer arietinum L. HOM05D003443 ORTHO05D008640 8.6e-24 114.4 135 48.1
Nitab4.5_0002883g0010 Nicotiana tabacum HOM05D003443 ORTHO05D008640 8.6e-24 114.4 122 53.3
FAN27G2419 Fragaria x ananassa HOM05D003443 ORTHO05D008640 1.1e-23 114.0 127 52.8
Nitab4.5_0001926g0050 Nicotiana tabacum HOM05D003443 ORTHO05D008640 1.1e-23 114.0 131 51.9
Actinidia23064 Actinidia chinensis HOM05D003443 ORTHO05D008640 1.5e-23 113.6 127 50.4
Carub.0006s2677 Capsella rubella HOM05D003443 ORTHO05D008640 2.5e-23 112.8 121 50.4
MD15G1353300 Malus domestica HOM05D003443 ORTHO05D008640 2.5e-23 112.8 120 53.3
Sc01g0001350 Simmondsia chinensis HOM05D003443 ORTHO05D008640 2.5e-23 112.8 142 44.4
Aqoxy6G00163 Aquilegia oxysepala HOM05D003443 ORTHO05D008640 3.3e-23 112.5 133 51.1
CANSAT25G1680 Cannabis sativa HOM05D003443 ORTHO05D008640 3.3e-23 112.5 121 51.2
MD03G1200300 Malus domestica HOM05D003443 ORTHO05D008640 3.3e-23 112.5 120 53.3
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 4.3e-23 112.1 122 50.0
BcaC01g04776 Brassica carinata HOM05D003443 ORTHO05D008640 5.6e-23 111.7 121 48.8
C03p33840 Brassica napus HOM05D003443 ORTHO05D008640 5.6e-23 111.7 121 48.8
BolC3t15700H Brassica oleracea HOM05D003443 ORTHO05D008640 5.6e-23 111.7 121 48.8
AUR62004720 Chenopodium quinoa HOM05D003443 ORTHO05D008640 5.6e-23 111.7 139 47.5
FvH4_2g26530 Fragaria vesca HOM05D003443 ORTHO05D008640 5.6e-23 111.7 129 51.2
Sp6g09810 Schrenkiella parvula HOM05D003443 ORTHO05D008640 5.6e-23 111.7 122 48.4
CAN.G513.1 Capsicum annuum HOM05D003443 ORTHO05D008640 7.3e-23 111.3 128 50.0
DCAR_014106 Daucus carota HOM05D003443 ORTHO05D008640 7.3e-23 111.3 129 52.7
Hma1.2p1_0073F.1_g038390 Hydrangea macrophylla HOM05D003443 ORTHO05D008640 9.5e-23 110.9 121 53.7
A03p27990 Brassica napus HOM05D003443 ORTHO05D008640 2.1e-22 109.8 122 47.5
Cc10_g11000 Coffea canephora HOM05D003443 ORTHO05D008640 2.1e-22 109.8 123 52.8
Solyc11g013020.2 Solanum lycopersicum HOM05D003443 ORTHO05D008640 2.1e-22 109.8 131 48.9
TAR628G1666 Trochodendron aralioides HOM05D003443 ORTHO05D008640 2.1e-22 109.8 88 67.0
Actinidia02607 Actinidia chinensis HOM05D003443 ORTHO05D008640 2.8e-22 109.4 131 49.6
PGSC0003DMG400000906 Solanum tuberosum HOM05D003443 ORTHO05D008640 2.8e-22 109.4 131 48.9
vmacro12548 Vaccinium macrocarpon HOM05D003443 ORTHO05D008640 3.6e-22 109.0 151 46.4
THA.LOC104817138 Tarenaya hassleriana HOM05D003443 ORTHO05D008640 4.7e-22 108.6 134 46.3
Sopen11g007760 Solanum pennellii HOM05D003443 ORTHO05D008640 6.2e-22 108.2 131 48.9
Rhsim06G0105400 Rhododendron simsii HOM05D003443 ORTHO05D008640 8.0e-22 107.8 142 48.6
HPP92_002301 Vanilla planifolia HOM05D003443 ORTHO05D008640 3.1e-21 105.9 119 49.6
SGA_v2.0_scaffold52G18981 Striga asiatica HOM05D003443 ORTHO05D008640 6.8e-21 104.8 122 50.8
Lj1g0013808 Lotus japonicus HOM05D003443 ORTHO05D008640 1.5e-20 103.6 130 47.7
arahy.Tifrunner.gnm1.ann1.B00VWE Arachis hypogaea HOM05D003443 ORTHO05D008640 4.9e-19 98.6 130 45.4
arahy.Tifrunner.gnm1.ann1.ZIXY5S Arachis hypogaea HOM05D003443 ORTHO05D008640 4.9e-19 98.6 130 44.6
ECA232G0443 Erigeron canadensis HOM05D003443 ORTHO05D008640 6.4e-19 98.2 126 43.7
SalBow7G2413 Salvia bowleyana HOM05D003443 ORTHO05D008640 1.1e-18 97.4 122 45.9
Eucgr.L01689 Eucalyptus grandis HOM05D003443 ORTHO05D008640 1.9e-18 96.7 105 51.4
unitig_747.g21488 Utricularia gibba HOM05D003443 ORTHO05D008640 2.4e-18 96.3 136 43.4
SEGI_04119 Sequoiadendron giganteum HOM05D003443 ORTHO05D008640 3.2e-18 95.9 126 43.7
Ah.16g110170 Amaranthus hybridus HOM05D003443 ORTHO05D008640 7.0e-18 94.7 69 63.8
Migut.C01148 Erythranthe guttata HOM05D003443 ORTHO05D008640 9.2e-18 94.4 122 46.7
Lsat_1_v5_gn_4_136221 Lactuca sativa HOM05D003443 ORTHO05D008640 1.2e-17 94.0 125 42.4
SalBow7G4791 Salvia bowleyana HOM05D003443 ORTHO05D008640 1.2e-17 94.0 122 45.1
AUR62023639 Chenopodium quinoa HOM05D003443 ORTHO05D008640 2.1e-17 93.2 121 44.6
HanXRQChr09g0254131 Helianthus annuus HOM05D003443 ORTHO05D008640 2.1e-17 93.2 124 41.1
MD08G1167900 Malus domestica HOM05D003443 ORTHO05D008640 3.5e-17 92.4 127 47.2
MSTRG.1460 Avicennia marina HOM05D003443 ORTHO05D008640 1.3e-16 90.5 122 43.4
MELO3C011304.2 Cucumis melo HOM05D003443 ORTHO05D008640 1.7e-16 90.1 144 38.9
CsaV3_6G003590 Cucumis sativus L. HOM05D003443 ORTHO05D008640 1.7e-16 90.1 130 40.8
MELO3C011587.2 Cucumis melo HOM05D003443 ORTHO05D008640 2.3e-16 89.7 130 40.8
Sed0028054 Sechium edule HOM05D003443 ORTHO05D008640 3.0e-16 89.4 124 41.1
Zm00001eb244530 Zea mays HOM05D003443 ORTHO05D008640 1.1e-15 87.4 143 42.7
Os02g0567000 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D008640 1.5e-15 87.0 117 46.2
TPR.G8499 Trifolium pratense HOM05D028375 ORTHO05D008640 1.9e-15 86.7 123 42.3
CDE06G0537 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 2.5e-15 86.3 109 47.7
CDE08G0113 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 2.5e-15 86.3 109 44.0
Hund27039 Selenicereus undatus HOM05D003443 ORTHO05D008640 1.2e-14 84.0 203 31.5
ClCG08G005410 Citrullus lanatus HOM05D003443 ORTHO05D008640 6.2e-14 81.6 79 51.9
Oeu047933.1 Olea europaea HOM05D003443 ORTHO05D008640 1.1e-13 80.9 79 55.7
Phvul.008G165400 Phaseolus vulgaris HOM05D003443 ORTHO05D008640 1.4e-13 80.5 121 40.5
TWI12G0841 Tripterygium wilfordii HOM05D003443 ORTHO05D008640 6.8e-13 78.2 71 53.5
Mapoly0161s0025 Marchantia polymorpha HOM05D003443 ORTHO05D008640 3.4e-12 75.9 121 37.2
PGR044G0044 Punica granatum HOM05D003443 ORTHO05D008640 3.7e-11 72.4 126 42.1
Cfa009666 Carpinus fangiana HOM05D003443 ORTHO05D008640 3.2e-10 69.3 76 51.3
Cpa.g.sc36.31 Carica papaya HOM05D003443 ORTHO05D008640 1.6e-09 67.0 102 42.2
Duzib093G0610 Durio zibethinus HOM05D003443 ORTHO05D008640 6.0e-09 65.1 126 39.7


User provided reference genes

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