Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0121G004 Amborella trichopoda HOM05D000079 ORTHO05D009764 1.7e-51 205.7 102 100.0
ATR1153G025 Amborella trichopoda HOM05D000079 ORTHO05D009764 6.3e-30 134.0 85 82.4
SEGI_28469 Sequoiadendron giganteum HOM05D000079 ORTHO05D009764 6.8e-16 87.4 83 51.8
GSVIVG01035902001 Vitis vinifera HOM05D000079 ORTHO05D009764 7.5e-15 84.0 81 55.6
QL02p019747 Quercus lobata HOM05D000079 ORTHO05D009764 9.8e-15 83.6 81 54.3
Actinidia14117 Actinidia chinensis HOM05D000079 ORTHO05D009764 1.7e-14 82.8 85 54.1
Ciclev10010432m.g Citrus clementina HOM05D000079 ORTHO05D009764 1.7e-14 82.8 81 55.6
TAR625G0359 Trochodendron aralioides HOM05D000079 ORTHO05D009764 1.7e-14 82.8 81 51.9
Haze_21437 Corylus avellana HOM05D000079 ORTHO05D009764 3.7e-14 81.6 81 50.6
Cfa013080 Carpinus fangiana HOM05D000079 ORTHO05D009764 1.1e-13 80.1 81 49.4
Dinv16473 Davidia involucrata HOM05D000079 ORTHO05D009764 1.1e-13 80.1 81 49.4
Nn8g39796 Nelumbo nucifera HOM05D000079 ORTHO05D009764 1.4e-13 79.7 81 49.4
Thecc.09G017500 Theobroma cacao HOM05D000079 ORTHO05D009764 2.4e-13 79.0 81 51.9
COL.COLO4_18935 Corchorus olitorius HOM05D000079 ORTHO05D009764 3.2e-13 78.6 81 51.9
Atru.chr7.2522 Acer truncatum HOM05D000079 ORTHO05D009764 4.1e-13 78.2 81 51.9
CSS0028334 Camellia sinensis var. sinensis HOM05D000079 ORTHO05D009764 4.1e-13 78.2 88 47.7
CSS0027093 Camellia sinensis var. sinensis HOM05D000079 ORTHO05D009764 7.0e-13 77.4 88 47.7
Duzib168G1220 Durio zibethinus HOM05D000079 ORTHO05D009764 1.2e-12 76.6 81 51.9
Sed0006294 Sechium edule HOM05D000079 ORTHO05D009764 2.0e-12 75.9 81 46.9
ClCG05G016470 Citrullus lanatus HOM05D000079 ORTHO05D009764 2.7e-12 75.5 81 48.1
TWI63G0198 Tripterygium wilfordii HOM05D000079 ORTHO05D009764 2.7e-12 75.5 84 50.0
MELO3C016974.2 Cucumis melo HOM05D000079 ORTHO05D009764 4.6e-12 74.7 81 46.9
CsaV3_4G036710 Cucumis sativus L. HOM05D000079 ORTHO05D009764 6.0e-12 74.3 81 46.9
Hma1.2p1_1523F.1_g288790 Hydrangea macrophylla HOM05D000079 ORTHO05D009764 7.8e-12 73.9 86 47.7
COL.COLO4_05053 Corchorus olitorius HOM05D000079 ORTHO05D009764 3.9e-11 71.6 81 45.7
Gohir.D13G188000 Gossypium hirsutum HOM05D000079 ORTHO05D009764 3.9e-11 71.6 83 51.8
Gorai.010G244000 Gossypium raimondii HOM05D000079 ORTHO05D009764 3.9e-11 71.6 83 51.8
MD08G1058900 Malus domestica HOM05D000079 ORTHO05D009764 3.9e-11 71.6 81 45.7
Thecc.02G306200 Theobroma cacao HOM05D000079 ORTHO05D009764 5.0e-11 71.2 81 46.9
Dinv14381 Davidia involucrata HOM05D000079 ORTHO05D009764 8.6e-11 70.5 81 43.2
Eucgr.C02715 Eucalyptus grandis HOM05D000079 ORTHO05D009764 8.6e-11 70.5 81 45.7
Eucgr.J02627 Eucalyptus grandis HOM05D000079 ORTHO05D009764 8.6e-11 70.5 81 45.7
Gohir.A05G058000 Gossypium hirsutum HOM05D000079 ORTHO05D009764 8.6e-11 70.5 81 49.4
Manes.16G127600 Manihot esculenta HOM05D000079 ORTHO05D009764 8.6e-11 70.5 81 45.7
CANSAT78G0893 Cannabis sativa HOM05D000079 ORTHO05D009764 1.1e-10 70.1 82 47.6
Atru.chr11.787 Acer truncatum HOM05D000079 ORTHO05D009764 1.5e-10 69.7 81 43.2
Cpa.g.sc127.12 Carica papaya HOM05D000079 ORTHO05D009764 1.5e-10 69.7 86 46.5
Migut.E01828 Erythranthe guttata HOM05D000079 ORTHO05D009764 1.9e-10 69.3 85 45.9
Hma1.2p1_0230F.1_g097220 Hydrangea macrophylla HOM05D000079 ORTHO05D009764 1.9e-10 69.3 86 46.5
Gohir.A13G179900 Gossypium hirsutum HOM05D000079 ORTHO05D009764 2.5e-10 68.9 83 50.6
Prupe.1G391500 Prunus persica HOM05D000079 ORTHO05D009764 2.5e-10 68.9 81 43.2
Glyma.14G110500 Glycine max HOM05D000079 ORTHO05D009764 3.3e-10 68.6 83 44.6
MD15G1037500 Malus domestica HOM05D000079 ORTHO05D009764 3.3e-10 68.6 81 44.4
PGR044G2260 Punica granatum HOM05D000079 ORTHO05D009764 3.3e-10 68.6 83 45.8
Lj7C730G10 Lonicera japonica HOM05D000079 ORTHO05D009764 4.3e-10 68.2 91 41.8
TAR371G0363 Trochodendron aralioides HOM05D000079 ORTHO05D009764 4.3e-10 68.2 81 42.0
Gohir.D05G060000 Gossypium hirsutum HOM05D000079 ORTHO05D009764 5.6e-10 67.8 81 49.4
Gorai.009G061100 Gossypium raimondii HOM05D000079 ORTHO05D009764 5.6e-10 67.8 81 49.4
Cfa015057 Carpinus fangiana HOM05D000079 ORTHO05D009764 7.3e-10 67.4 81 43.2
Glyma.17G217200 Glycine max HOM05D000079 ORTHO05D009764 7.3e-10 67.4 83 44.6
EL10Ac2g04135 Beta vulgaris HOM05D000079 ORTHO05D009764 1.2e-09 66.6 81 45.7
Nn4g24486 Nelumbo nucifera HOM05D000079 ORTHO05D009764 1.2e-09 66.6 81 42.0
AUR62012462 Chenopodium quinoa HOM05D000079 ORTHO05D009764 1.6e-09 66.2 81 44.4
AUR62031586 Chenopodium quinoa HOM05D000079 ORTHO05D009764 1.6e-09 66.2 81 44.4
QL03p038558 Quercus lobata HOM05D000079 ORTHO05D009764 1.6e-09 66.2 81 42.0
Hund03465 Selenicereus undatus HOM05D000079 ORTHO05D009764 2.1e-09 65.9 81 45.7
CDE05G2468 Ceratophyllum demersum HOM05D000079 ORTHO05D009764 2.8e-09 65.5 81 38.3
Haze_10833 Corylus avellana HOM05D000079 ORTHO05D009764 2.8e-09 65.5 81 43.2
FvH4_2g40900 Fragaria vesca HOM05D000079 ORTHO05D009764 6.2e-09 64.3 84 41.7
Aa31LG2G18190 Aethionema arabicum HOM05D000079 ORTHO05D009764 1.1e-08 63.5 88 46.6
ATR0021G021 Amborella trichopoda HOM05D000079 ORTHO05D009764 1.4e-08 63.2 98 34.7
FAN15G0290 Fragaria x ananassa HOM05D000079 ORTHO05D009764 2.3e-08 62.4 85 41.2
BolC7t46346H Brassica oleracea HOM05D000079 ORTHO05D009764 3.1e-08 62.0 91 39.6
FAN20G1311 Fragaria x ananassa HOM05D000079 ORTHO05D009764 3.1e-08 62.0 85 41.2
Thhalv10025159m.g Eutrema salsugineum HOM05D000079 ORTHO05D009764 6.8e-08 60.8 86 43.0
FAN27G1993 Fragaria x ananassa HOM05D000079 ORTHO05D009764 6.8e-08 60.8 85 41.2
A03p61130 Brassica napus HOM05D000079 ORTHO05D009764 8.9e-08 60.5 86 40.7
C07p58990 Brassica napus HOM05D000079 ORTHO05D009764 8.9e-08 60.5 86 40.7
BraA03t15151Z Brassica rapa HOM05D000079 ORTHO05D009764 8.9e-08 60.5 86 40.7
Phvul.001G046200 Phaseolus vulgaris HOM05D000079 ORTHO05D009764 8.9e-08 60.5 83 42.2
RcHm_v2.0_Chr6g0299671 Rosa chinensis HOM05D000079 ORTHO05D009764 1.2e-07 60.1 85 40.0
Sp7g29730 Schrenkiella parvula HOM05D000079 ORTHO05D009764 1.5e-07 59.7 86 41.9
Carub.0007s0863 Capsella rubella HOM05D000079 ORTHO05D009764 4.4e-07 58.2 87 41.4
THA.LOC104803636 Tarenaya hassleriana HOM05D000079 ORTHO05D009764 4.4e-07 58.2 83 42.2
CARHR239830 Cardamine hirsuta HOM05D000079 ORTHO05D009764 7.5e-07 57.4 86 38.4
arahy.Tifrunner.gnm1.ann1.5TM68G Arachis hypogaea HOM05D000079 ORTHO05D009764 9.8e-07 57.0 83 38.6
arahy.Tifrunner.gnm1.ann1.E4PME3 Arachis hypogaea HOM05D000079 ORTHO05D009764 9.8e-07 57.0 83 38.6
AL7G19980 Arabidopsis lyrata HOM05D000079 ORTHO05D009764 1.3e-06 56.6 86 40.7
AT4G31910 Arabidopsis thaliana HOM05D000079 ORTHO05D009764 1.7e-06 56.2 83 41.0
VMungo0647G0784 Vigna mungo HOM05D000079 ORTHO05D009764 4.9e-06 54.7 83 38.6


User provided reference genes

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