Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 8.2e-94 347.1 175 100.0
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 9.5e-34 147.5 125 60.8
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 1.6e-33 146.7 113 69.0
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 3.1e-32 142.5 113 66.4
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 4.0e-32 142.1 111 68.5
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 8.9e-32 141.0 112 63.4
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 1.2e-31 140.6 127 61.4
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 2.0e-31 139.8 146 50.7
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 3.4e-31 139.0 134 54.5
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 9.8e-31 137.5 145 56.6
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 1.7e-30 136.7 119 62.2
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 3.7e-30 135.6 129 58.1
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 1.1e-29 134.0 112 62.5
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 1.1e-29 134.0 118 55.9
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 1.1e-29 134.0 124 53.2
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 1.9e-29 133.3 111 62.2
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 3.2e-29 132.5 123 60.2
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 4.1e-29 132.1 112 64.3
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 5.4e-29 131.7 112 59.8
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 5.4e-29 131.7 110 63.6
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 5.4e-29 131.7 121 58.7
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 9.2e-29 131.0 124 56.5
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 9.2e-29 131.0 115 59.1
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 1.2e-28 130.6 134 56.0
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 1.2e-28 130.6 115 61.7
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 1.2e-28 130.6 126 56.3
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 2.0e-28 129.8 109 61.5
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 2.0e-28 129.8 95 68.4
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 2.7e-28 129.4 116 62.1
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 3.5e-28 129.0 98 65.3
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 3.5e-28 129.0 139 54.0
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 3.5e-28 129.0 117 60.7
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 3.5e-28 129.0 110 60.9
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 6.0e-28 128.3 112 64.3
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 6.0e-28 128.3 97 68.0
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 7.8e-28 127.9 113 61.1
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 7.8e-28 127.9 127 59.1
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 1.3e-27 127.1 110 60.9
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 1.3e-27 127.1 97 60.8
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 1.3e-27 127.1 92 68.5
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 1.7e-27 126.7 136 53.7
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 1.7e-27 126.7 121 52.1
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 1.7e-27 126.7 118 55.9
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 2.3e-27 126.3 96 66.7
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 2.3e-27 126.3 120 56.7
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 3.0e-27 125.9 138 53.6
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 3.0e-27 125.9 116 61.2
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 3.0e-27 125.9 112 59.8
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 3.9e-27 125.6 159 45.3
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 6.6e-27 124.8 139 53.2
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 6.6e-27 124.8 128 55.5
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 8.6e-27 124.4 128 53.9
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 1.1e-26 124.0 139 52.5
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 1.5e-26 123.6 114 59.6
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 4.3e-26 122.1 117 55.6
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 7.3e-26 121.3 131 47.3
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 9.5e-26 120.9 110 53.6
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 9.5e-26 120.9 110 53.6
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 9.5e-26 120.9 110 53.6
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 1.2e-25 120.6 107 58.9
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 1.6e-25 120.2 118 55.1
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 1.6e-25 120.2 115 53.0
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 1.6e-25 120.2 110 53.6
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 1.6e-25 120.2 110 53.6
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 2.8e-25 119.4 113 53.1
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 2.8e-25 119.4 139 48.9
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 3.6e-25 119.0 129 46.5
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 3.6e-25 119.0 120 51.7
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 4.7e-25 118.6 90 63.3
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 8.1e-25 117.9 88 63.6
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 1.1e-24 117.5 144 49.3
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 1.4e-24 117.1 88 69.3
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 2.3e-24 116.3 149 48.3
PGSC0003DMG400026859 Solanum tuberosum HOM05D007597 ORTHO05D009608 2.3e-24 116.3 148 47.3
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 4.0e-24 115.5 114 54.4
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 8.9e-24 114.4 99 61.6
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 1.2e-23 114.0 110 55.5
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 7.5e-23 111.3 116 50.0
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 1.7e-22 110.2 118 53.4
Sopen03g002540 Solanum pennellii HOM05D007597 ORTHO05D009608 1.9e-21 106.7 78 71.8
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 1.6e-20 103.6 110 51.8
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 3.5e-20 102.4 91 56.0
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 1.3e-19 100.5 91 53.8
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 6.8e-16 88.2 91 51.6
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 5.8e-15 85.1 98 51.0
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 1.2e-12 77.4 181 33.7
SMO115G0274 Selaginella moellendorffii HOM05D007597 ORTHO05D009608 2.3e-11 73.2 89 43.8
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 3.0e-11 72.8 93 49.5
TAR371G0144 Trochodendron aralioides HOM05D007597 ORTHO05D009608 4.7e-09 65.5 76 52.6
Nitab4.5_0000241g0020 Nicotiana tabacum HOM05D007597 ORTHO05D009608 1.7e-06 57.0 45 66.7
QL03p036112 Quercus lobata HOM05D007597 ORTHO05D009608 1.7e-06 57.0 67 47.8
Nitab4.5_0006778g0040 Nicotiana tabacum HOM05D007597 ORTHO05D009608 3.8e-06 55.8 115 35.7
Manes.17G084450 Manihot esculenta HOM05D007597 ORTHO05D000073 6.4e-06 55.1 39 69.2


User provided reference genes

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