Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0116G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 8.6e-108 393.7 199 100.0
ATR0045G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 1.4e-105 386.3 199 98.0
ATR0757G159 Amborella trichopoda HOM05D004423 ORTHO05D005464 5.1e-100 367.9 199 93.5
ATR0316G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 2.5e-99 365.5 199 93.0
ATR0564G023 Amborella trichopoda HOM05D004423 ORTHO05D005464 1.1e-94 350.1 194 91.2
ATR0322G068 Amborella trichopoda HOM05D004423 ORTHO05D005464 4.3e-83 311.6 189 84.7
ATR0757G178 Amborella trichopoda HOM05D004423 ORTHO05D005464 1.1e-73 280.4 173 84.4
ATR0796G217 Amborella trichopoda HOM05D004423 ORTHO05D005464 4.1e-73 278.5 153 90.2
ATR1002G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 8.7e-68 260.8 140 92.1
ATR1016G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 2.5e-67 259.2 140 90.7
ATR0049G066 Amborella trichopoda HOM05D004423 ORTHO05D005464 9.7e-67 257.3 140 90.0
ATR0342G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 3.7e-66 255.4 140 90.0
ATR0882G001 Amborella trichopoda HOM05D004423 ORTHO05D005464 1.8e-65 253.1 140 89.3
ATR0626G235 Amborella trichopoda HOM05D004423 ORTHO05D005464 3.9e-60 235.3 127 91.3
ATR0733G014 Amborella trichopoda HOM05D004423 ORTHO05D005464 3.0e-44 182.6 104 87.5
Dinv41903 Davidia involucrata HOM05D004423 ORTHO05D005464 1.4e-33 147.1 202 39.6
GSVIVG01023952001 Vitis vinifera HOM05D004423 ORTHO05D005464 1.7e-31 140.2 197 39.1
Actinidia18027 Actinidia chinensis HOM05D004423 ORTHO05D005464 2.9e-31 139.4 208 38.0
TAR376G0159 Trochodendron aralioides HOM05D004423 ORTHO05D005464 2.9e-31 139.4 206 42.2
ATR0598G019 Amborella trichopoda HOM05D004423 ORTHO05D005464 8.5e-31 137.9 82 87.8
Hma1.2p1_0032F.1_g019020 Hydrangea macrophylla HOM05D004423 ORTHO05D005464 8.5e-31 137.9 207 41.1
MBI01_g09373_MAGBIO Magnolia biondii HOM05D004423 ORTHO05D005464 1.1e-30 137.5 202 44.1
Actinidia20541 Actinidia chinensis HOM05D004423 ORTHO05D005464 1.5e-30 137.1 210 38.1
PSO063G1777 Papaver somniferum HOM05D004423 ORTHO05D005464 1.9e-30 136.7 200 40.0
Lj5C174T8 Lonicera japonica HOM05D004423 ORTHO05D005464 3.2e-30 136.0 194 41.8
ClCG02G011090 Citrullus lanatus HOM05D004423 ORTHO05D005464 5.5e-30 135.2 202 38.6
Thecc.02G052800 Theobroma cacao HOM05D004423 ORTHO05D005464 5.5e-30 135.2 213 38.0
Ca_05030_v3 Cicer arietinum L. HOM05D004423 ORTHO05D005464 7.2e-30 134.8 206 42.7
PSO782G0263 Papaver somniferum HOM05D004423 ORTHO05D005464 7.2e-30 134.8 200 40.0
Manes.11G100750 Manihot esculenta HOM05D004423 ORTHO05D005464 1.2e-29 134.0 202 38.1
Cfa005315 Carpinus fangiana HOM05D004423 ORTHO05D005464 1.6e-29 133.7 203 38.4
Nn7g38050 Nelumbo nucifera HOM05D004423 ORTHO05D005464 3.6e-29 132.5 202 41.1
Oeu045082.1 Olea europaea HOM05D004423 ORTHO05D005464 3.6e-29 132.5 183 43.2
Duzib132G0529 Durio zibethinus HOM05D004423 ORTHO05D005464 4.7e-29 132.1 213 38.5
Lalb_Chr17g0341361 Lupinus albus HOM05D004423 ORTHO05D005464 6.1e-29 131.7 205 42.4
Haze_02070 Corylus avellana HOM05D004423 ORTHO05D005464 8.0e-29 131.3 203 37.9
QL11p053191 Quercus lobata HOM05D004423 ORTHO05D005464 8.0e-29 131.3 203 36.9
Potri.009G139900 Populus trichocarpa HOM05D004423 ORTHO05D005464 1.0e-28 131.0 217 36.4
Sabra09G0108500 Salix brachista HOM05D004423 ORTHO05D005464 1.0e-28 131.0 217 36.9
arahy.Tifrunner.gnm1.ann1.CJIC4D Arachis hypogaea HOM05D004423 ORTHO05D005464 1.4e-28 130.6 194 41.8
arahy.Tifrunner.gnm1.ann1.YN7PRK Arachis hypogaea HOM05D004423 ORTHO05D005464 1.4e-28 130.6 194 41.8
CiPaw.05G087000 Carya illinoinensis HOM05D004423 ORTHO05D005464 1.4e-28 130.6 200 40.5
CsaV3_6G012570 Cucumis sativus L. HOM05D004423 ORTHO05D005464 1.8e-28 130.2 207 38.2
CANSAT25G0289 Cannabis sativa HOM05D004423 ORTHO05D005464 2.3e-28 129.8 202 38.1
Gorai.002G201600 Gossypium raimondii HOM05D004423 ORTHO05D005464 2.3e-28 129.8 216 35.2
Sed0008640 Sechium edule HOM05D004423 ORTHO05D005464 2.3e-28 129.8 203 36.9
Aqoxy2G04085 Aquilegia oxysepala HOM05D004423 ORTHO05D005464 4.0e-28 129.0 201 43.3
TPR.G38573 Trifolium pratense HOM05D004423 ORTHO05D005464 4.0e-28 129.0 195 42.6
Gohir.D01G162500 Gossypium hirsutum HOM05D004423 ORTHO05D005464 6.8e-28 128.3 216 34.7
TWI75G0836 Tripterygium wilfordii HOM05D004423 ORTHO05D005464 8.8e-28 127.9 203 39.4
MELO3C013664.2 Cucumis melo HOM05D004423 ORTHO05D005464 1.2e-27 127.5 206 37.9
Glyma.01G063600 Glycine max HOM05D004423 ORTHO05D005464 1.2e-27 127.5 192 41.1
Psat2g133680 Pisum sativum HOM05D004423 ORTHO05D005464 1.5e-27 127.1 195 41.0
Cpa.g.sc20.132 Carica papaya HOM05D004423 ORTHO05D005464 2.0e-27 126.7 202 36.6
AUR62009995 Chenopodium quinoa HOM05D004423 ORTHO05D005464 2.6e-27 126.3 195 39.0
Gohir.A01G171600 Gossypium hirsutum HOM05D004423 ORTHO05D005464 2.6e-27 126.3 217 35.0
Sp7g37340 Schrenkiella parvula HOM05D004423 ORTHO05D005464 2.6e-27 126.3 186 40.3
Atru.chr5.3471 Acer truncatum HOM05D004423 ORTHO05D005464 3.4e-27 125.9 203 38.4
PGR042G3292 Punica granatum HOM05D004423 ORTHO05D005464 3.4e-27 125.9 209 37.8
EL10Ac9g21318 Beta vulgaris HOM05D004423 ORTHO05D005464 4.4e-27 125.6 192 42.7
Glyma.02G121200 Glycine max HOM05D004423 ORTHO05D005464 7.5e-27 124.8 192 39.6
Phvul.003G039700 Phaseolus vulgaris HOM05D004423 ORTHO05D005464 7.5e-27 124.8 194 40.2
Sc18g0006140 Simmondsia chinensis HOM05D004423 ORTHO05D005464 7.5e-27 124.8 196 38.3
AL7G10310 Arabidopsis lyrata HOM05D004423 ORTHO05D005464 9.8e-27 124.4 186 38.7
MD10G1131500 Malus domestica HOM05D004423 ORTHO05D005464 9.8e-27 124.4 196 37.2
Medtr1g031840 Medicago truncatula HOM05D004423 ORTHO05D005464 9.8e-27 124.4 195 40.0
Medtr5g046240 Medicago truncatula HOM05D004423 ORTHO05D005464 9.8e-27 124.4 195 40.0
VMungo1215G3113 Vigna mungo HOM05D004423 ORTHO05D005464 1.3e-26 124.0 193 39.4
Zm00001eb385260 Zea mays HOM05D004423 ORTHO05D005464 2.2e-26 123.2 195 39.0
RcHm_v2.0_Chr6g0279371 Rosa chinensis HOM05D004423 ORTHO05D005464 2.8e-26 122.9 196 39.3
Prupe.8G172300 Prunus persica HOM05D004423 ORTHO05D005464 3.7e-26 122.5 196 36.7
Ciclev10027678m.g Citrus clementina HOM05D004423 ORTHO05D005464 4.9e-26 122.1 204 37.3
Carub.0007s0033 Capsella rubella HOM05D004423 ORTHO05D005464 6.3e-26 121.7 196 37.8
Solyc01g111910.3 Solanum lycopersicum HOM05D004423 ORTHO05D005464 6.3e-26 121.7 181 44.2
Sopen01g053960 Solanum pennellii HOM05D004423 ORTHO05D005464 6.3e-26 121.7 181 44.2
Aa31LG6G16860 Aethionema arabicum HOM05D004423 ORTHO05D005464 8.3e-26 121.3 186 39.2
CARHR294170 Cardamine hirsuta HOM05D004423 ORTHO05D005464 8.3e-26 121.3 186 39.2
AUR62012983 Chenopodium quinoa HOM05D004423 ORTHO05D005464 8.3e-26 121.3 200 35.5
Os06g0574400 Oryza sativa ssp. japonica HOM05D004423 ORTHO05D005464 8.3e-26 121.3 189 40.2
FAN15G2581 Fragaria x ananassa HOM05D004423 ORTHO05D005464 1.1e-25 120.9 196 39.8
MD05G1128200 Malus domestica HOM05D004423 ORTHO05D005464 1.1e-25 120.9 196 38.3
FAN20G1295 Fragaria x ananassa HOM05D004423 ORTHO05D005464 1.4e-25 120.6 196 39.3
Rhsim11G0195000 Rhododendron simsii HOM05D004423 ORTHO05D005464 1.8e-25 120.2 218 36.2
FAN24G1532 Fragaria x ananassa HOM05D004423 ORTHO05D005464 2.4e-25 119.8 196 38.3
Peaxi162Scf00362g00356 Petunia axillaris HOM05D004423 ORTHO05D005464 2.4e-25 119.8 182 41.8
FAN27G3078 Fragaria x ananassa HOM05D004423 ORTHO05D005464 3.1e-25 119.4 196 39.3
Lj2g0017242 Lotus japonicus HOM05D004423 ORTHO05D005464 3.1e-25 119.4 209 39.7
SalBow1G2566 Salvia bowleyana HOM05D004423 ORTHO05D000248 3.1e-25 119.4 201 35.3
AT4G38440 Arabidopsis thaliana HOM05D004423 ORTHO05D005464 4.1e-25 119.0 186 37.6
CAN.G1235.36 Capsicum annuum HOM05D004423 ORTHO05D005464 4.1e-25 119.0 181 40.9
FvH4_2g15920 Fragaria vesca HOM05D004423 ORTHO05D005464 4.1e-25 119.0 196 38.3
vmacro02301 Vaccinium macrocarpon HOM05D004423 ORTHO05D005464 4.1e-25 119.0 201 36.3
ECA246G1499 Erigeron canadensis HOM05D004423 ORTHO05D005464 7.0e-25 118.2 197 41.1
Lsat_1_v5_gn_3_47300 Lactuca sativa HOM05D004423 ORTHO05D005464 9.2e-25 117.9 183 43.2
SalBow1G3590 Salvia bowleyana HOM05D004423 ORTHO05D005464 1.2e-24 117.5 201 35.3
BraA04t16972Z Brassica rapa HOM05D004423 ORTHO05D005464 2.0e-24 116.7 190 41.6
C04p46880 Brassica napus HOM05D004423 ORTHO05D005464 3.5e-24 115.9 190 40.5
BolC4t26280H Brassica oleracea HOM05D004423 ORTHO05D005464 3.5e-24 115.9 190 40.5
Nitab4.5_0003679g0020 Nicotiana tabacum HOM05D004423 ORTHO05D005464 3.5e-24 115.9 181 41.4
Hund06453 Selenicereus undatus HOM05D004423 ORTHO05D005464 3.5e-24 115.9 199 36.7
Ah.01g008070 Amaranthus hybridus HOM05D004423 ORTHO05D005464 4.5e-24 115.5 206 36.4
unitig_21.g20846 Utricularia gibba HOM05D004423 ORTHO05D005464 4.5e-24 115.5 206 36.9
A04p13130 Brassica napus HOM05D004423 ORTHO05D005464 1.0e-23 114.4 190 41.1
DCAR_022414 Daucus carota HOM05D004423 ORTHO05D005464 1.3e-23 114.0 202 37.6
Thhalv10024216m.g Eutrema salsugineum HOM05D004423 ORTHO05D005464 1.3e-23 114.0 186 38.2
HanXRQChr17g0543821 Helianthus annuus HOM05D004423 ORTHO05D005464 1.3e-23 114.0 191 40.3
Eucgr.E03994 Eucalyptus grandis HOM05D004423 ORTHO05D005464 2.3e-23 113.2 199 35.7
Cc00_g02430 Coffea canephora HOM05D004423 ORTHO05D005464 3.8e-23 112.5 195 37.9
Eucgr.G01811 Eucalyptus grandis HOM05D004423 ORTHO05D005464 3.8e-23 112.5 199 35.7
Migut.B00041 Erythranthe guttata HOM05D004423 ORTHO05D005464 6.6e-23 111.7 203 34.5
SGA_v2.0_scaffold58G20334 Striga asiatica HOM05D004423 ORTHO05D005464 1.9e-22 110.2 197 38.1
HPP92_023981 Vanilla planifolia HOM05D004423 ORTHO05D005464 4.7e-21 105.5 192 34.9
SHI08411 Sapria himalayana HOM05D004423 ORTHO05D005464 1.0e-20 104.4 167 37.7
THA.LOC104824748 Tarenaya hassleriana HOM05D004423 ORTHO05D005464 1.0e-20 104.4 186 34.4
CDE09G0751 Ceratophyllum demersum HOM05D004423 ORTHO05D005464 3.4e-19 99.4 128 43.8
BcaB06g27461 Brassica carinata HOM05D004423 ORTHO05D005464 1.1e-17 94.4 129 42.6
SEGI_28605 Sequoiadendron giganteum HOM05D004423 ORTHO05D005464 3.2e-17 92.8 224 33.0
Haze_02078 Corylus avellana HOM05D004423 ORTHO05D005464 5.4e-17 92.0 185 33.5
SHI46553 Sapria himalayana HOM05D004423 ORTHO05D005464 1.6e-13 80.5 105 42.9
Hma1.2p1_0032F.1_g019040 Hydrangea macrophylla HOM05D004423 ORTHO05D005464 2.8e-13 79.7 114 40.4
HPP92_024002 Vanilla planifolia HOM05D004423 ORTHO05D005464 8.9e-12 74.7 133 33.8
AagrBONN_evm.TU.Sc2ySwM_369.194 Anthoceros agrestis HOM05D004423 ORTHO05D005464 8.3e-10 68.2 170 33.5
Pp3c6_25040 Physcomitrium patens HOM05D004423 ORTHO05D005464 7.0e-09 65.1 176 29.5
Mapoly0006s0149 Marchantia polymorpha HOM05D004423 ORTHO05D005464 1.2e-08 64.3 137 35.8
Pp3c14_25290 Physcomitrium patens HOM05D004423 ORTHO05D005464 4.6e-08 62.4 213 26.3
SMO119G0387 Selaginella moellendorffii HOM05D004423 ORTHO05D005464 1.9e-06 57.0 136 36.0


User provided reference genes

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