Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 2.9e-82 308.5 159 100.0
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 2.0e-46 189.5 130 71.5
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 3.7e-45 185.3 140 66.4
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 6.4e-45 184.5 134 67.9
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 6.4e-45 184.5 145 62.1
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 1.9e-44 183.0 131 71.0
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 4.1e-44 181.8 134 65.7
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 7.0e-44 181.0 126 69.8
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 1.2e-43 180.3 130 70.0
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 3.5e-43 178.7 144 62.5
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 3.5e-43 178.7 140 61.4
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 4.6e-43 178.3 137 62.8
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 4.6e-43 178.3 128 68.8
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 1.0e-42 177.2 131 67.2
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 1.7e-42 176.4 127 65.4
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 1.7e-42 176.4 129 65.1
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 2.3e-42 176.0 120 68.3
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 2.3e-42 176.0 132 63.6
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 2.3e-42 176.0 134 62.7
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 2.3e-42 176.0 117 71.8
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 3.0e-42 175.6 129 65.1
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 3.9e-42 175.3 129 63.6
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 5.0e-42 174.9 124 66.1
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 5.0e-42 174.9 128 64.8
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 8.6e-42 174.1 126 65.1
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 8.6e-42 174.1 120 67.5
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.1e-41 173.7 130 63.8
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.1e-41 173.7 130 63.8
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 1.1e-41 173.7 128 66.4
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 1.1e-41 173.7 122 69.7
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 1.5e-41 173.3 137 65.0
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 1.5e-41 173.3 133 61.7
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 1.5e-41 173.3 124 66.1
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 2.5e-41 172.6 131 63.4
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 2.5e-41 172.6 122 68.9
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 3.3e-41 172.2 120 66.7
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 3.3e-41 172.2 132 60.6
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 4.3e-41 171.8 162 57.4
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 4.3e-41 171.8 125 66.4
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 5.6e-41 171.4 126 65.9
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 5.6e-41 171.4 125 63.2
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 7.3e-41 171.0 117 71.8
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 7.3e-41 171.0 145 57.9
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 7.3e-41 171.0 129 62.0
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 9.5e-41 170.6 124 65.3
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 9.5e-41 170.6 155 55.5
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 9.5e-41 170.6 138 60.1
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 1.6e-40 169.9 130 64.6
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 1.6e-40 169.9 134 64.2
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 2.1e-40 169.5 163 55.8
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 2.8e-40 169.1 131 63.4
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 2.8e-40 169.1 107 74.8
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 4.7e-40 168.3 125 63.2
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 6.2e-40 167.9 129 64.3
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 6.2e-40 167.9 130 61.5
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 8.1e-40 167.5 137 60.6
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 8.1e-40 167.5 123 64.2
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 1.1e-39 167.2 131 61.8
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 1.1e-39 167.2 132 64.4
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 1.4e-39 166.8 136 61.8
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 2.3e-39 166.0 123 65.0
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 5.2e-39 164.9 127 63.0
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 8.9e-39 164.1 124 62.9
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 1.2e-38 163.7 131 61.1
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 3.4e-38 162.2 132 59.8
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 5.8e-38 161.4 154 51.3
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 5.8e-38 161.4 154 51.9
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 5.8e-38 161.4 154 51.9
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 5.8e-38 161.4 154 51.9
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 7.5e-38 161.0 128 65.6
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 9.8e-38 160.6 116 62.9
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 9.8e-38 160.6 120 60.8
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 9.8e-38 160.6 147 53.7
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 1.7e-37 159.8 148 55.4
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 1.7e-37 159.8 116 62.1
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 2.2e-37 159.5 116 62.1
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 2.9e-37 159.1 152 53.3
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 8.3e-37 157.5 141 53.2
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 8.3e-37 157.5 134 55.2
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 1.1e-36 157.1 116 60.3
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 1.1e-36 157.1 116 60.3
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 2.4e-36 156.0 144 54.9
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 3.2e-36 155.6 119 64.7
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 4.1e-36 155.2 118 61.0
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 4.1e-36 155.2 118 61.0
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 7.1e-36 154.5 122 59.8
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 7.1e-36 154.5 104 68.3
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 1.2e-35 153.7 118 60.2
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 1.2e-35 153.7 116 62.9
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 1.6e-35 153.3 115 60.9
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 2.7e-35 152.5 128 55.5
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 3.5e-35 152.1 128 55.5
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 3.5e-35 152.1 128 55.5
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 3.5e-35 152.1 128 55.5
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 3.5e-35 152.1 128 55.5
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 3.5e-35 152.1 128 55.5
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 3.5e-35 152.1 122 59.0
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 6.0e-35 151.4 118 59.3
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 6.6e-34 147.9 113 60.2
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 4.7e-32 141.7 131 57.3
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 2.1e-24 116.3 91 59.3
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 2.1e-24 116.3 91 59.3
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 2.1e-24 116.3 91 59.3
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 8.1e-24 114.4 153 41.8
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 1.8e-23 113.2 82 63.4
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 5.2e-23 111.7 119 47.9
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 3.8e-21 105.5 81 66.7
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 4.2e-20 102.1 74 66.2
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 1.6e-19 100.1 119 45.4
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 3.3e-17 92.4 69 65.2
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 5.6e-17 91.7 102 47.1
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 3.1e-15 85.9 116 37.9
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 6.0e-11 71.6 50 64.0
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 6.2e-08 61.6 131 32.1
Os03g0210700 Oryza sativa ssp. japonica HOM05D006961 ORTHO05D008809 1.4e-07 60.5 44 59.1


User provided reference genes

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