Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 7.6e-53 211.5 247 100.0
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 1.3e-20 104.4 245 76.3
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 1.3e-20 104.4 125 57.6
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 4.9e-20 102.4 123 46.3
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 8.4e-20 101.7 121 45.5
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 1.1e-19 101.3 121 43.0
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 1.1e-19 101.3 123 59.3
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 1.9e-19 100.5 107 48.6
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 1.9e-19 100.5 107 62.6
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 4.2e-19 99.4 107 63.6
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 7.1e-19 98.6 104 58.7
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 9.3e-19 98.2 125 57.6
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 1.6e-18 97.4 110 44.5
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 2.1e-18 97.1 121 47.9
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 4.6e-18 95.9 122 54.9
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 4.6e-18 95.9 127 58.3
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.3e-17 94.4 120 55.8
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 1.8e-17 94.0 89 53.9
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 3.9e-17 92.8 121 51.2
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 6.7e-17 92.0 119 43.7
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 1.1e-16 91.3 246 74.8
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 1.1e-16 91.3 105 45.7
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 1.1e-16 91.3 107 57.9
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.9e-16 90.5 122 45.1
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 1.9e-16 90.5 121 42.1
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.5e-16 90.1 126 41.3
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 3.3e-16 89.7 121 55.4
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 4.3e-16 89.4 105 57.1
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 7.4e-16 88.6 116 56.0
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 7.4e-16 88.6 121 40.5
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.6e-15 87.4 91 54.9
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 1.6e-15 87.4 113 54.0
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 1.6e-15 87.4 119 41.2
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.1e-15 87.0 119 41.2
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 2.1e-15 87.0 123 55.3
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 2.8e-15 86.7 120 54.2
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 3.7e-15 86.3 120 39.2
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 6.3e-15 85.5 95 46.3
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 6.3e-15 85.5 123 52.0
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 6.3e-15 85.5 111 42.3
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 6.3e-15 85.5 122 53.3
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 8.2e-15 85.1 123 50.4
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 8.2e-15 85.1 117 55.6
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 1.4e-14 84.3 106 46.2
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 1.4e-14 84.3 121 52.1
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 1.8e-14 84.0 90 48.9
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 2.4e-14 83.6 91 46.2
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 2.4e-14 83.6 91 46.2
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 2.4e-14 83.6 91 46.2
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 3.1e-14 83.2 92 48.9
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 4.1e-14 82.8 125 52.0
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 5.3e-14 82.4 117 53.0
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 5.3e-14 82.4 96 60.4
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 9.0e-14 81.6 95 46.3
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 9.0e-14 81.6 95 46.3
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.2e-13 81.3 95 46.3
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 1.5e-13 80.9 123 52.0
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 2.0e-13 80.5 121 52.9
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 2.6e-13 80.1 121 50.4
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 2.6e-13 80.1 75 53.3
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 2.6e-13 80.1 122 50.0
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 4.5e-13 79.3 125 52.8
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 1.0e-12 78.2 146 32.9
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 1.0e-12 78.2 83 49.4
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 1.0e-12 78.2 115 51.3
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 2.9e-12 76.6 70 55.7
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 2.9e-12 76.6 83 47.0
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 2.9e-12 76.6 103 49.5
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 6.5e-12 75.5 107 42.1
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 6.5e-12 75.5 121 47.1
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 1.1e-11 74.7 106 51.9
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 2.5e-11 73.6 120 50.8
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 5.5e-11 72.4 121 50.4
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 7.2e-11 72.0 122 48.4
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 9.3e-11 71.6 88 44.3
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 1.6e-10 70.9 72 47.2
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 2.7e-10 70.1 115 37.4
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.5e-10 69.7 93 41.9
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 3.5e-10 69.7 82 48.8
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 3.5e-10 69.7 249 72.7
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 6.1e-10 68.9 87 42.5
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 6.1e-10 68.9 74 48.6
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 7.9e-10 68.6 105 50.5
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 7.9e-10 68.6 67 49.3
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 1.0e-09 68.2 65 52.3
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 1.3e-09 67.8 87 41.4
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.8e-09 67.4 67 49.3
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.3e-09 67.0 67 49.3
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.3e-09 67.0 67 49.3
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 3.0e-09 66.6 75 45.3
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 3.9e-09 66.2 65 49.2
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 3.9e-09 66.2 82 42.7
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 5.1e-09 65.9 69 44.9
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 6.7e-09 65.5 115 47.8
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 6.7e-09 65.5 67 47.8
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 8.7e-09 65.1 69 44.9
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 8.7e-09 65.1 82 46.3
Cre02.g117550 Chlamydomonas reinhardtii HOM05D006591 ORTHO05D007861 2.5e-08 63.5 106 33.0
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 2.5e-08 63.5 85 41.2
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 4.3e-08 62.8 66 47.0
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 1.3e-07 61.2 64 46.9
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 1.6e-07 60.8 84 39.3
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 2.2e-07 60.5 79 40.5
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 2.2e-07 60.5 75 40.0
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 2.8e-07 60.1 77 39.0
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 1.8e-06 57.4 62 48.4
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 2.4e-06 57.0 84 39.3
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 3.1e-06 56.6 109 33.9
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 6.9e-06 55.5 105 46.7


User provided reference genes

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