Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0106G002 Amborella trichopoda HOM05D008020 ORTHO05D010140 2.2e-45 185.3 93 100.0
PSO210G7351 Papaver somniferum HOM05D008020 ORTHO05D010140 1.7e-21 105.9 93 60.2
Eucgr.F03547 Eucalyptus grandis HOM05D008020 ORTHO05D010140 1.9e-20 102.4 75 66.7
Nn6g31749 Nelumbo nucifera HOM05D008020 ORTHO05D010140 3.2e-20 101.7 87 60.9
ClCG11G018630 Citrullus lanatus HOM05D008020 ORTHO05D010140 7.1e-20 100.5 100 56.0
TAR625G0930 Trochodendron aralioides HOM05D008020 ORTHO05D010140 1.6e-19 99.4 72 70.8
CDE05G0785 Ceratophyllum demersum HOM05D008020 ORTHO05D010140 2.7e-19 98.6 96 64.6
TWI56G1414 Tripterygium wilfordii HOM05D008020 ORTHO05D010140 6.0e-19 97.4 92 58.7
Medtr3g115170 Medicago truncatula HOM05D008020 ORTHO05D010140 7.8e-19 97.1 91 58.2
Glyma.04G018700 Glycine max HOM05D008020 ORTHO05D010140 1.0e-18 96.7 90 60.0
Rhsim06G0008300 Rhododendron simsii HOM05D008020 ORTHO05D010140 1.0e-18 96.7 96 61.5
Gorai.002G118600 Gossypium raimondii HOM05D008020 ORTHO05D010140 1.7e-18 95.9 97 59.8
Cpa.g.sc26.209 Carica papaya HOM05D008020 ORTHO05D010140 2.3e-18 95.5 92 56.5
Gohir.D01G093200 Gossypium hirsutum HOM05D008020 ORTHO05D010140 2.3e-18 95.5 97 59.8
Migut.C00948 Erythranthe guttata HOM05D008020 ORTHO05D010140 3.0e-18 95.1 86 58.1
Migut.C00952 Erythranthe guttata HOM05D008020 ORTHO05D010140 3.0e-18 95.1 86 58.1
Phvul.009G021900 Phaseolus vulgaris HOM05D008020 ORTHO05D010140 3.0e-18 95.1 89 60.7
Glyma.06G019000 Glycine max HOM05D008020 ORTHO05D010140 3.9e-18 94.7 94 59.6
Gohir.A01G106700 Gossypium hirsutum HOM05D008020 ORTHO05D010140 8.6e-18 93.6 97 58.8
Psat5g011800 Pisum sativum HOM05D008020 ORTHO05D010140 1.1e-17 93.2 91 57.1
MELO3C017014.2 Cucumis melo HOM05D008020 ORTHO05D010140 2.5e-17 92.0 96 55.2
Actinidia29785 Actinidia chinensis HOM05D008020 ORTHO05D010140 3.3e-17 91.7 82 57.3
CsaV3_4G037160 Cucumis sativus L. HOM05D008020 ORTHO05D010140 3.3e-17 91.7 81 58.0
Manes.05G135100 Manihot esculenta HOM05D008020 ORTHO05D010140 9.6e-17 90.1 93 57.0
Ca_15441_v3 Cicer arietinum L. HOM05D008020 ORTHO05D010140 1.2e-16 89.7 92 57.6
Haze_22756 Corylus avellana HOM05D008020 ORTHO05D010140 1.2e-16 89.7 95 52.6
Thecc.08G057500 Theobroma cacao HOM05D008020 ORTHO05D010140 1.2e-16 89.7 96 53.1
FvH4_2g37570 Fragaria vesca HOM05D008020 ORTHO05D010140 1.6e-16 89.4 99 54.5
Oeu056212.1 Olea europaea HOM05D008020 ORTHO05D010140 2.1e-16 89.0 96 52.1
FAN15G1770 Fragaria x ananassa HOM05D008020 ORTHO05D010140 2.8e-16 88.6 98 54.1
SalBow7G2452 Salvia bowleyana HOM05D008020 ORTHO05D010140 3.6e-16 88.2 72 62.5
unitig_0.g2104 Utricularia gibba HOM05D008020 ORTHO05D010140 3.6e-16 88.2 75 62.7
COL.COLO4_00185 Corchorus olitorius HOM05D008020 ORTHO05D010140 4.7e-16 87.8 100 52.0
HanXRQChr15g0492771 Helianthus annuus HOM05D008020 ORTHO05D010140 4.7e-16 87.8 76 60.5
Lalb_Chr11g0061691 Lupinus albus HOM05D008020 ORTHO05D010140 4.7e-16 87.8 91 53.8
VMungo1309G2936 Vigna mungo HOM05D008020 ORTHO05D010140 4.7e-16 87.8 93 57.0
COL.COLO4_03997 Corchorus olitorius HOM05D008020 ORTHO05D010140 8.1e-16 87.0 100 52.0
Lsat_1_v5_gn_9_44980 Lactuca sativa HOM05D008020 ORTHO05D010140 1.8e-15 85.9 75 61.3
Lj1g0023017 Lotus japonicus HOM05D008020 ORTHO05D010140 3.1e-15 85.1 91 54.9
Cfa014061 Carpinus fangiana HOM05D008020 ORTHO05D010140 5.2e-15 84.3 72 59.7
Duzib041G0109 Durio zibethinus HOM05D008020 ORTHO05D010140 5.2e-15 84.3 96 53.1
C03p28110 Brassica napus HOM05D008020 ORTHO05D010140 1.5e-14 82.8 110 46.4
RcHm_v2.0_Chr6g0304161 Rosa chinensis HOM05D008020 ORTHO05D010140 1.5e-14 82.8 96 53.1
Carub.0008s0691 Capsella rubella HOM05D008020 ORTHO05D010140 2.0e-14 82.4 103 50.5
Sc26g0004630 Simmondsia chinensis HOM05D008020 ORTHO05D010140 2.0e-14 82.4 96 53.1
BolC3t15181H Brassica oleracea HOM05D008020 ORTHO05D010140 2.6e-14 82.0 109 48.6
MD15G1003000 Malus domestica HOM05D008020 ORTHO05D010140 2.6e-14 82.0 77 59.7
arahy.Tifrunner.gnm1.ann1.IQ4KFY Arachis hypogaea HOM05D008020 ORTHO05D010140 3.4e-14 81.6 90 52.2
CARHR284890 Cardamine hirsuta HOM05D008020 ORTHO05D010140 4.4e-14 81.3 104 48.1
SEGI_30631 Sequoiadendron giganteum HOM05D008020 ORTHO05D010140 4.4e-14 81.3 89 50.6
AT5G42290 Arabidopsis thaliana HOM05D008020 ORTHO05D010140 5.8e-14 80.9 115 47.8
BcaB01g03440 Brassica carinata HOM05D008020 ORTHO05D010140 9.9e-14 80.1 113 46.0
BcaC01g05309 Brassica carinata HOM05D008020 ORTHO05D010140 9.9e-14 80.1 109 45.9
ECA232G3495 Erigeron canadensis HOM05D008020 ORTHO05D010140 9.9e-14 80.1 79 57.0
Os03g0133100 Oryza sativa ssp. japonica HOM05D008020 ORTHO05D010140 1.3e-13 79.7 83 55.4
EL10Ac1g01981 Beta vulgaris HOM05D008020 ORTHO05D010140 1.7e-13 79.3 75 54.7
Sp7g08310 Schrenkiella parvula HOM05D008020 ORTHO05D010140 2.2e-13 79.0 112 46.4
CSS0004036 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 2.9e-13 78.6 74 56.8
Thhalv10009649m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 2.9e-13 78.6 111 45.0
Zm00001eb402590 Zea mays HOM05D008020 ORTHO05D010140 6.4e-13 77.4 77 57.1
AL8G19330 Arabidopsis lyrata HOM05D008020 ORTHO05D010140 1.9e-12 75.9 109 48.6
Thhalv10028031m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 2.4e-12 75.5 111 44.1
CSS0008844 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 4.6e-11 71.2 74 52.7
Ah.00g000390 Amaranthus hybridus HOM05D008020 ORTHO05D010140 1.7e-10 69.3 115 42.6
AUR62036888 Chenopodium quinoa HOM05D008020 ORTHO05D010140 2.3e-10 68.9 73 56.2
AUR62043558 Chenopodium quinoa HOM05D008020 ORTHO05D010140 2.3e-10 68.9 73 56.2
AagrBONN_evm.TU.Sc2ySwM_368.1603 Anthoceros agrestis HOM05D008020 ORTHO05D010140 4.3e-09 64.7 76 55.3
Aa31LG9G12400 Aethionema arabicum HOM05D008020 ORTHO05D010140 5.6e-09 64.3 95 46.3
Pp3c20_23510 Physcomitrium patens HOM05D008020 ORTHO05D010140 1.8e-07 59.3 77 49.4
Atru.chr13.153 Acer truncatum HOM05D008020 ORTHO05D010140 5.3e-07 57.8 75 44.0
Ciclev10003459m.g Citrus clementina HOM05D008020 ORTHO05D010140 9.9e-06 53.5 50 58.0


User provided reference genes

Program Settings