Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 8.1e-252 873.2 431 100.0
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 2.5e-136 489.6 416 57.5
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 2.8e-135 486.1 422 55.9
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 2.0e-133 479.9 431 54.5
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 2.6e-133 479.6 422 55.2
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 3.4e-133 479.2 427 54.3
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 5.8e-133 478.4 426 54.7
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 9.9e-133 477.6 418 53.6
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 1.7e-132 476.9 438 52.5
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 1.9e-131 473.4 420 53.1
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 2.4e-131 473.0 424 55.0
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 2.4e-131 473.0 342 62.9
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 2.4e-131 473.0 418 55.3
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 4.1e-131 472.2 429 54.3
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 5.4e-131 471.9 417 54.4
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 5.4e-131 471.9 410 56.8
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 7.1e-131 471.5 435 53.3
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 1.2e-130 470.7 421 56.1
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 2.1e-130 469.9 342 63.2
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 2.7e-130 469.5 434 53.7
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 2.7e-130 469.5 429 53.8
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 3.5e-130 469.2 342 63.2
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 3.5e-130 469.2 417 54.0
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 3.5e-130 469.2 417 53.2
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 3.5e-130 469.2 352 61.4
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 4.6e-130 468.8 416 54.3
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 7.8e-130 468.0 416 54.6
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 1.3e-129 467.2 420 54.5
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 1.3e-129 467.2 432 53.2
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 2.3e-129 466.5 432 53.5
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 5.1e-129 465.3 416 54.1
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 5.1e-129 465.3 416 54.1
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 6.6e-129 464.9 417 53.7
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 1.9e-128 463.4 428 53.3
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.5e-128 463.0 430 53.5
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 3.3e-128 462.6 418 54.3
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 7.3e-128 461.5 422 53.8
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 7.3e-128 461.5 420 55.2
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 9.5e-128 461.1 417 53.2
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 1.2e-127 460.7 420 54.0
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 1.2e-127 460.7 416 53.1
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 1.2e-127 460.7 342 60.5
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 1.6e-127 460.3 419 53.2
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 1.6e-127 460.3 425 55.1
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 2.1e-127 459.9 431 51.7
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 2.8e-127 459.5 422 52.4
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 2.8e-127 459.5 417 54.0
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 8.1e-127 458.0 429 53.4
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.4e-126 457.2 349 63.6
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 1.8e-126 456.8 417 52.5
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 2.4e-126 456.4 342 61.1
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 2.4e-126 456.4 359 57.9
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 3.1e-126 456.1 420 53.8
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 4.0e-126 455.7 413 52.5
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 5.2e-126 455.3 419 53.7
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 5.2e-126 455.3 416 54.1
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 8.9e-126 454.5 418 54.1
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 1.2e-125 454.1 420 53.3
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 1.2e-125 454.1 421 54.2
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.0e-125 453.4 437 52.2
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 2.0e-125 453.4 435 52.0
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 2.6e-125 453.0 358 57.8
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 3.4e-125 452.6 423 53.2
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 4.4e-125 452.2 418 53.6
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 5.8e-125 451.8 424 53.8
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 5.8e-125 451.8 348 59.5
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 5.8e-125 451.8 413 52.3
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 7.6e-125 451.4 437 52.2
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 9.9e-125 451.1 437 50.8
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 9.9e-125 451.1 418 53.8
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 1.3e-124 450.7 423 53.2
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 2.9e-124 449.5 428 53.7
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 4.9e-124 448.7 424 52.6
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 6.4e-124 448.4 426 51.9
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 6.4e-124 448.4 369 56.9
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 6.4e-124 448.4 409 52.6
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 8.4e-124 448.0 349 58.2
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 2.4e-123 446.4 416 51.2
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 3.2e-123 446.0 426 52.3
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 3.2e-123 446.0 426 52.3
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 3.2e-123 446.0 426 52.3
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 7.1e-123 444.9 428 51.6
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 9.2e-123 444.5 416 53.1
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 1.2e-122 444.1 422 53.1
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 2.1e-122 443.4 430 52.1
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 2.1e-122 443.4 413 55.4
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 2.7e-122 443.0 416 53.1
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 2.7e-122 443.0 416 53.1
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 2.7e-122 443.0 416 53.1
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 4.6e-122 442.2 416 53.4
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 4.6e-122 442.2 416 51.2
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 6.0e-122 441.8 419 51.8
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 6.0e-122 441.8 417 51.1
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 6.0e-122 441.8 451 49.4
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 7.8e-122 441.4 416 53.4
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 1.0e-121 441.0 420 51.9
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 1.3e-121 440.7 430 51.6
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 1.3e-121 440.7 340 58.2
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 1.7e-121 440.3 409 52.3
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 3.0e-121 439.5 406 52.7
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 6.6e-121 438.3 418 50.5
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 6.6e-121 438.3 434 50.7
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 1.5e-120 437.2 403 52.9
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 3.3e-120 436.0 423 51.5
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 3.3e-120 436.0 430 49.5
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 9.6e-120 434.5 343 57.7
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 2.8e-119 433.0 423 50.4
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 8.1e-119 431.4 450 48.4
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 1.8e-118 430.3 335 59.1
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 4.0e-118 429.1 417 51.3
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.7e-116 423.7 437 49.4
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 1.7e-116 423.7 442 48.4
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 3.2e-115 419.5 343 56.3
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 7.1e-115 418.3 420 50.0
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 1.6e-114 417.2 413 49.6
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 3.5e-114 416.0 420 51.2
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 5.1e-113 412.1 345 58.3
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 6.6e-113 411.8 360 55.3
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 3.3e-112 409.5 429 49.9
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 3.3e-112 409.5 431 49.7
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 4.3e-112 409.1 379 52.5
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 7.3e-112 408.3 417 50.6
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.3e-111 407.5 425 50.4
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 2.8e-111 406.4 340 57.9
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 3.6e-111 406.0 431 49.4
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 1.8e-110 403.7 422 50.5
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 2.4e-110 403.3 433 49.2
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 2.4e-110 403.3 333 57.7
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 5.3e-110 402.1 341 55.7
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 2.6e-109 399.8 420 50.2
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 4.5e-109 399.1 427 48.2
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 5.8e-109 398.7 341 55.1
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 3.8e-108 396.0 417 49.4
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 3.8e-108 396.0 339 54.9
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 3.8e-108 396.0 421 49.9
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-107 394.4 428 48.8
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 9.3e-107 391.3 289 60.9
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 9.3e-107 391.3 430 48.6
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.6e-106 390.6 441 46.3
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 5.3e-102 375.6 314 57.6
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 6.9e-102 375.2 352 52.0
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 2.5e-99 366.7 304 58.6
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.3e-97 360.9 357 49.3
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 2.3e-97 360.1 353 49.6
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 1.2e-93 347.8 342 48.2
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.9e-92 343.2 348 49.4
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 5.0e-92 342.4 250 59.6
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 4.2e-91 339.3 363 45.5
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 6.1e-90 335.5 400 44.8
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 7.9e-90 335.1 361 46.3
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 7.4e-88 328.6 390 42.6
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 3.7e-87 326.2 385 47.3
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 6.3e-87 325.5 251 56.6
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 1.5e-85 320.9 240 59.2
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 2.6e-85 320.1 370 44.6
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 2.9e-84 316.6 443 43.1
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 3.2e-83 313.2 240 59.2
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.4e-78 297.7 342 43.6
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.5e-75 287.0 344 41.3
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 4.7e-74 282.7 300 47.3
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 4.7e-74 282.7 340 42.6
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 1.8e-73 280.8 237 54.0
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.8e-73 280.8 346 41.9
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.0e-72 277.3 342 42.1
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 2.0e-69 267.3 283 50.9
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 5.9e-69 265.8 237 50.2
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 7.7e-69 265.4 343 38.8
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 8.8e-65 251.9 343 39.1
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 5.7e-64 249.2 393 37.4
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 1.4e-62 244.6 241 45.6
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 5.4e-38 162.9 480 27.5
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 3.1e-33 147.1 149 51.7
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 4.6e-29 133.3 154 45.5
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.3e-23 115.2 100 53.0
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.5e-19 101.7 85 50.6
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.2e-18 98.6 119 42.0
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 3.6e-18 97.1 79 49.4
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.8e-17 94.7 87 55.2
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 5.2e-17 93.2 86 50.0
ATR0555G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 4.7e-10 70.1 69 39.1
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.4e-06 57.8 129 37.2


User provided reference genes

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