Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0100G054 Amborella trichopoda HOM05D007022 ORTHO05D008868 7.9e-88 327.0 158 100.0
Nn1g04883 Nelumbo nucifera HOM05D007022 ORTHO05D008868 1.2e-43 180.3 140 62.9
GSVIVG01031751001 Vitis vinifera HOM05D007022 ORTHO05D008868 2.0e-43 179.5 165 57.0
Sc08g0000700 Simmondsia chinensis HOM05D005091 ORTHO05D006047 7.7e-43 177.6 140 60.0
Haze_10076 Corylus avellana HOM05D007022 ORTHO05D008868 1.0e-42 177.2 141 63.1
Manes.07G082700 Manihot esculenta HOM05D007022 ORTHO05D008868 2.9e-42 175.6 144 61.1
Dinv42154 Davidia involucrata HOM05D007022 ORTHO05D008868 3.8e-42 175.3 135 65.9
Dinv23619 Davidia involucrata HOM05D007022 ORTHO05D008868 5.0e-42 174.9 112 70.5
MBI06_g36648_MAGBIO Magnolia biondii HOM05D007022 ORTHO05D008868 6.5e-42 174.5 134 64.2
PGR042G2146 Punica granatum HOM05D007022 ORTHO05D008868 1.9e-41 172.9 119 68.1
SalBow6G3975 Salvia bowleyana HOM05D007022 ORTHO05D008868 1.9e-41 172.9 132 60.6
Lj9A358T46 Lonicera japonica HOM05D007022 ORTHO05D008868 5.5e-41 171.4 160 58.8
Nn5g30258 Nelumbo nucifera HOM05D007022 ORTHO05D008868 7.2e-41 171.0 125 62.4
TAR381G0954 Trochodendron aralioides HOM05D007022 ORTHO05D008868 7.2e-41 171.0 121 65.3
Oeu013707.1 Olea europaea HOM05D007022 ORTHO05D008868 9.5e-41 170.6 130 60.0
CDE04G2473 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 1.2e-40 170.2 105 75.2
Cpa.g.sc62.15 Carica papaya HOM05D007022 ORTHO05D008868 1.6e-40 169.9 138 61.6
Ciclev10029362m.g Citrus clementina HOM05D007022 ORTHO05D008868 1.6e-40 169.9 118 66.9
unitig_26.g10239 Utricularia gibba HOM05D007022 ORTHO05D008868 1.6e-40 169.9 131 59.5
VMungo0251G0366 Vigna mungo HOM05D007022 ORTHO05D008868 2.1e-40 169.5 131 62.6
Cc02_g18740 Coffea canephora HOM05D007022 ORTHO05D008868 2.7e-40 169.1 139 61.2
QL11p035981 Quercus lobata HOM05D007022 ORTHO05D008868 2.7e-40 169.1 136 62.5
Rhsim11G0166300 Rhododendron simsii HOM05D007022 ORTHO05D008868 6.1e-40 167.9 102 73.5
Oeu007283.1 Olea europaea HOM05D007022 ORTHO05D008868 8.0e-40 167.5 133 59.4
vmacro02203 Vaccinium macrocarpon HOM05D007022 ORTHO05D008868 8.0e-40 167.5 118 66.1
Hma1.2p1_0370F.1_g137830 Hydrangea macrophylla HOM05D007022 ORTHO05D008868 1.0e-39 167.2 121 68.6
Migut.B00344 Erythranthe guttata HOM05D007022 ORTHO05D008868 1.8e-39 166.4 131 61.1
Potri.009G102400 Populus trichocarpa HOM05D007022 ORTHO05D008868 2.3e-39 166.0 140 59.3
Solyc01g108200.3 Solanum lycopersicum HOM05D007022 ORTHO05D008868 2.3e-39 166.0 126 61.1
Sopen01g050430 Solanum pennellii HOM05D007022 ORTHO05D008868 2.3e-39 166.0 126 61.1
SGA_v2.0_scaffold13G06591 Striga asiatica HOM05D007022 ORTHO05D008868 4.0e-39 165.2 148 56.1
CiPaw.06G172800 Carya illinoinensis HOM05D007022 ORTHO05D008868 5.2e-39 164.9 134 59.0
Nitab4.5_0007480g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 5.2e-39 164.9 128 58.6
Sed0002892 Sechium edule HOM05D007022 ORTHO05D008868 6.8e-39 164.5 118 68.6
Actinidia12953 Actinidia chinensis HOM05D007022 ORTHO05D008868 8.8e-39 164.1 105 72.4
MSTRG.27723 Avicennia marina HOM05D007022 ORTHO05D008868 1.5e-38 163.3 125 62.4
CsaV3_3G018570 Cucumis sativus L. HOM05D007022 ORTHO05D008868 1.5e-38 163.3 122 66.4
Actinidia00443 Actinidia chinensis HOM05D007022 ORTHO05D008868 2.0e-38 162.9 105 71.4
COL.COLO4_32660 Corchorus olitorius HOM05D007022 ORTHO05D003154 2.0e-38 162.9 120 62.5
FAN24G2553 Fragaria x ananassa HOM05D007022 ORTHO05D008868 2.0e-38 162.9 119 65.5
PGSC0003DMG401025892 Solanum tuberosum HOM05D007022 ORTHO05D008868 2.0e-38 162.9 118 63.6
Nitab4.5_0002543g0040 Nicotiana tabacum HOM05D007022 ORTHO05D008868 2.6e-38 162.5 129 57.4
arahy.Tifrunner.gnm1.ann1.WB2CJ6 Arachis hypogaea HOM05D007022 ORTHO05D008868 3.4e-38 162.2 103 70.9
Thecc.02G100400 Theobroma cacao HOM05D007022 ORTHO05D008868 4.4e-38 161.8 120 64.2
FAN15G0654 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.3e-37 160.2 118 65.3
Lj4g0019449 Lotus japonicus HOM05D007022 ORTHO05D008868 1.7e-37 159.8 156 55.1
FAN20G2768 Fragaria x ananassa HOM05D007022 ORTHO05D008868 3.7e-37 158.7 118 64.4
Gohir.A13G040100 Gossypium hirsutum HOM05D007022 ORTHO05D008868 3.7e-37 158.7 120 61.7
Gohir.D13G038800 Gossypium hirsutum HOM05D007022 ORTHO05D008868 3.7e-37 158.7 120 61.7
Gorai.013G043500 Gossypium raimondii HOM05D007022 ORTHO05D008868 3.7e-37 158.7 120 61.7
Aqoxy6G01341 Aquilegia oxysepala HOM05D007022 ORTHO05D008868 6.3e-37 157.9 120 62.5
TWI75G1380 Tripterygium wilfordii HOM05D007022 ORTHO05D008868 1.1e-36 157.1 122 66.4
EL10Ac9g21683 Beta vulgaris HOM05D007022 ORTHO05D008868 3.1e-36 155.6 138 53.6
MD10G1094200 Malus domestica HOM05D007022 ORTHO05D008868 4.1e-36 155.2 123 64.2
MELO3C019509.2 Cucumis melo HOM05D007022 ORTHO05D008868 7.0e-36 154.5 122 63.1
Prupe.8G124000 Prunus persica HOM05D007022 ORTHO05D008868 9.2e-36 154.1 127 61.4
ClCG05G010000 Citrullus lanatus HOM05D007022 ORTHO05D008868 2.7e-35 152.5 124 60.5
Phvul.003G292600 Phaseolus vulgaris HOM05D007022 ORTHO05D008868 2.7e-35 152.5 123 61.8
Glyma.07G212100 Glycine max HOM05D007022 ORTHO05D008868 1.3e-34 150.2 130 59.2
THA.LOC104798819 Tarenaya hassleriana HOM05D007022 ORTHO05D008868 1.3e-34 150.2 72 86.1
BcaB06g25978 Brassica carinata HOM05D007022 ORTHO05D008868 2.3e-34 149.4 87 73.6
CSS0015269 Camellia sinensis var. sinensis HOM05D007022 ORTHO05D008868 2.3e-34 149.4 112 66.1
CANSAT25G3754 Cannabis sativa HOM05D007022 ORTHO05D008868 2.3e-34 149.4 91 72.5
PSO675G2542 Papaver somniferum HOM05D007022 ORTHO05D008868 2.9e-34 149.1 86 74.4
Hund00236 Selenicereus undatus HOM05D007022 ORTHO05D008868 2.9e-34 149.1 136 55.1
HPP92_016383 Vanilla planifolia HOM05D002198 ORTHO05D008868 2.9e-34 149.1 113 61.9
Sp3g17290 Schrenkiella parvula HOM05D007022 ORTHO05D008868 3.8e-34 148.7 87 73.6
Sopen10g021420 Solanum pennellii HOM05D007022 ORTHO05D008868 3.8e-34 148.7 86 73.3
Thhalv10021599m.g Eutrema salsugineum HOM05D007022 ORTHO05D008868 5.0e-34 148.3 87 73.6
Lsat_1_v5_gn_9_110080 Lactuca sativa HOM05D007022 ORTHO05D008868 6.6e-34 147.9 95 68.4
Aa31LG8G6010 Aethionema arabicum HOM05D007022 ORTHO05D008868 8.6e-34 147.5 87 73.6
Carub.0003s1905 Capsella rubella HOM05D007022 ORTHO05D008868 8.6e-34 147.5 126 57.9
ECA240G1411 Erigeron canadensis HOM05D007022 ORTHO05D008868 8.6e-34 147.5 87 71.3
Peaxi162Scf00016g01823 Petunia axillaris HOM05D007022 ORTHO05D008868 8.6e-34 147.5 139 54.0
HanXRQChr09g0251721 Helianthus annuus HOM05D007022 ORTHO05D008868 1.5e-33 146.7 123 57.7
RcHm_v2.0_Chr6g0257061 Rosa chinensis HOM05D007022 ORTHO05D008868 1.5e-33 146.7 112 66.1
AL3G32600 Arabidopsis lyrata HOM05D007022 ORTHO05D008868 1.9e-33 146.4 126 57.1
AT3G19220 Arabidopsis thaliana HOM05D007022 ORTHO05D008868 1.9e-33 146.4 126 57.1
BcaC05g28522 Brassica carinata HOM05D007022 ORTHO05D008868 2.5e-33 146.0 87 72.4
BolC5t33329H Brassica oleracea HOM05D007022 ORTHO05D008868 2.5e-33 146.0 87 72.4
PSO541G2619 Papaver somniferum HOM05D007022 ORTHO05D008868 2.5e-33 146.0 86 73.3
A05p30420 Brassica napus HOM05D007022 ORTHO05D008868 3.3e-33 145.6 119 58.0
BraA05t21880Z Brassica rapa HOM05D007022 ORTHO05D008868 3.3e-33 145.6 119 58.0
FvH4_2g06130 Fragaria vesca HOM05D007022 ORTHO05D008868 3.3e-33 145.6 111 64.0
Atru.chr5.2709 Acer truncatum HOM05D007022 ORTHO05D008868 7.3e-33 144.4 109 63.3
Glyma.02G132900 Glycine max HOM05D007022 ORTHO05D008868 1.6e-32 143.3 132 54.5
arahy.Tifrunner.gnm1.ann1.059Z6S Arachis hypogaea HOM05D007022 ORTHO05D008868 3.0e-31 139.0 87 71.3
Psat7g125000 Pisum sativum HOM05D007022 ORTHO05D008868 5.2e-31 138.3 88 70.5
Lalb_Chr16g0384701 Lupinus albus HOM05D007022 ORTHO05D008868 8.9e-31 137.5 114 59.6
Ca_18680_v3 Cicer arietinum L. HOM05D007022 ORTHO05D008868 5.7e-30 134.8 103 62.1
Os09g0458400 Oryza sativa ssp. japonica HOM05D007022 ORTHO05D008868 1.3e-29 133.7 87 64.4
TPR.G28492 Trifolium pratense HOM05D007022 ORTHO05D008868 1.7e-29 133.3 103 59.2
Ah.01g019040 Amaranthus hybridus HOM05D007022 ORTHO05D008868 1.1e-28 130.6 136 53.7
Zm00001eb100830 Zea mays HOM05D007022 ORTHO05D008868 1.8e-28 129.8 169 43.2
Medtr4g086255 Medicago truncatula HOM05D007022 ORTHO05D008868 3.2e-28 129.0 84 67.9
Pp3c2_400 Physcomitrium patens HOM05D007022 ORTHO05D008868 7.8e-27 124.4 94 55.3
Nitab4.5_0012979g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 1.7e-26 123.2 106 57.5
Pp3c1_42880 Physcomitrium patens HOM05D007022 ORTHO05D008868 2.3e-26 122.9 94 54.3
SMO232G0067 Selaginella moellendorffii HOM05D007022 ORTHO05D008868 3.0e-26 122.5 86 57.0
Nitab4.5_0005758g0030 Nicotiana tabacum HOM05D007022 ORTHO05D008868 5.0e-26 121.7 106 56.6
AUR62016784 Chenopodium quinoa HOM05D007022 ORTHO05D008868 4.3e-25 118.6 87 60.9
CBR_g29933 Chara braunii HOM05D007022 ORTHO05D008868 5.6e-25 118.2 87 58.6
AagrBONN_evm.TU.Sc2ySwM_368.1030 Anthoceros agrestis HOM05D007022 ORTHO05D008868 7.3e-25 117.9 91 52.7
CDE03G0325 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 2.8e-24 115.9 56 83.9
Mapoly0186s0009 Marchantia polymorpha HOM05D007022 ORTHO05D008868 4.9e-21 105.1 156 41.0
Sopen10g021450 Solanum pennellii HOM05D007022 ORTHO05D008868 5.0e-18 95.1 68 66.2
Cfa004517 Carpinus fangiana HOM05D007022 ORTHO05D008868 4.7e-16 88.6 100 52.0
Sabra09G0078400 Salix brachista HOM05D007022 ORTHO05D008868 1.1e-12 77.4 95 49.5
PGSC0003DMG400006210 Solanum tuberosum HOM05D007022 ORTHO05D008868 3.5e-11 72.4 83 47.0
DCAR_022028 Daucus carota HOM05D007022 ORTHO05D008868 4.6e-11 72.0 111 40.5
SEGI_10031 Sequoiadendron giganteum HOM05D007022 ORTHO05D008868 4.6e-11 72.0 35 85.7
SEGI_30369 Sequoiadendron giganteum HOM05D007022 ORTHO05D014789 1.3e-10 70.5 79 51.9
ECA240G0576 Erigeron canadensis HOM05D007022 ORTHO05D008868 5.1e-10 68.6 47 63.8
CARHR094630 Cardamine hirsuta HOM05D007022 ORTHO05D008868 3.6e-08 62.4 84 42.9
Rhsim11G0166200 Rhododendron simsii HOM05D007022 ORTHO05D008868 8.1e-08 61.2 28 89.3


User provided reference genes

Program Settings