Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0088G040 Amborella trichopoda HOM05D007470 ORTHO05D009337 6.1e-38 160.2 76 100.0
ATR0088G051 Amborella trichopoda HOM05D007470 ORTHO05D009337 2.2e-27 125.2 64 93.8
CANSAT64G2994 Cannabis sativa HOM05D007470 ORTHO05D009337 3.6e-22 107.8 64 78.1
Actinidia36214 Actinidia chinensis HOM05D007470 ORTHO05D009337 8.1e-22 106.7 64 76.6
Potri.017G067804 Populus trichocarpa HOM05D007470 ORTHO05D009337 5.2e-21 104.0 64 75.0
CiPaw.03G057800 Carya illinoinensis HOM05D007470 ORTHO05D009337 8.9e-21 103.2 64 75.0
ECA246G0009 Erigeron canadensis HOM05D007470 ORTHO05D009337 1.2e-20 102.8 64 71.9
Nn3g16402 Nelumbo nucifera HOM05D007470 ORTHO05D009337 4.4e-20 100.9 64 75.0
QL02p070898 Quercus lobata HOM05D007470 ORTHO05D009337 4.4e-20 100.9 64 75.0
arahy.Tifrunner.gnm1.ann1.WUC6HZ Arachis hypogaea HOM05D007470 ORTHO05D009337 5.8e-20 100.5 64 73.4
Haze_14895 Corylus avellana HOM05D007470 ORTHO05D009337 5.8e-20 100.5 64 75.0
COL.COLO4_13289 Corchorus olitorius HOM05D007470 ORTHO05D009337 7.5e-20 100.1 64 73.4
TWI34G1845 Tripterygium wilfordii HOM05D007470 ORTHO05D009337 7.5e-20 100.1 66 71.2
Dinv38225 Davidia involucrata HOM05D007470 ORTHO05D009337 9.9e-20 99.8 64 73.4
Aqoxy3G01589 Aquilegia oxysepala HOM05D007470 ORTHO05D009337 1.3e-19 99.4 64 75.0
Manes.11G086800 Manihot esculenta HOM05D007470 ORTHO05D009337 1.3e-19 99.4 64 73.4
TAR629G2381 Trochodendron aralioides HOM05D007470 ORTHO05D009337 1.3e-19 99.4 64 73.4
Sabra17G0058800 Salix brachista HOM05D007470 ORTHO05D009337 1.7e-19 99.0 62 72.6
MSTRG.3067 Avicennia marina HOM05D007470 ORTHO05D009337 2.2e-19 98.6 64 71.9
EL10Ac6g15436 Beta vulgaris HOM05D007470 ORTHO05D009337 2.2e-19 98.6 62 74.2
AUR62003423 Chenopodium quinoa HOM05D007470 ORTHO05D009337 2.9e-19 98.2 64 70.3
FvH4_6g53800 Fragaria vesca HOM05D007470 ORTHO05D009337 2.9e-19 98.2 64 73.4
Lalb_Chr08g0235091 Lupinus albus HOM05D007470 ORTHO05D009337 2.9e-19 98.2 64 71.9
AL6G24760 Arabidopsis lyrata HOM05D007470 ORTHO05D009337 3.7e-19 97.8 64 70.3
BcaB08g36958 Brassica carinata HOM05D007470 ORTHO05D009337 3.7e-19 97.8 64 70.3
MD17G1001700 Malus domestica HOM05D007470 ORTHO05D009337 3.7e-19 97.8 64 73.4
Sp6g29900 Schrenkiella parvula HOM05D007470 ORTHO05D009337 3.7e-19 97.8 64 70.3
arahy.Tifrunner.gnm1.ann1.Y5JERX Arachis hypogaea HOM05D007470 ORTHO05D009337 4.9e-19 97.4 64 71.9
BcaC04g19060 Brassica carinata HOM05D007470 ORTHO05D009337 4.9e-19 97.4 64 70.3
A10p24330 Brassica napus HOM05D007470 ORTHO05D009337 4.9e-19 97.4 64 70.3
BolC9t59139H Brassica oleracea HOM05D002467 ORTHO05D009337 4.9e-19 97.4 64 70.3
BraA10t44499Z Brassica rapa HOM05D007470 ORTHO05D009337 4.9e-19 97.4 64 70.3
AUR62029418 Chenopodium quinoa HOM05D007470 ORTHO05D009337 4.9e-19 97.4 64 70.3
CSS0012152 Camellia sinensis var. sinensis HOM05D007470 ORTHO05D009337 6.4e-19 97.1 70 65.7
Thhalv10014315m.g Eutrema salsugineum HOM05D007470 ORTHO05D009337 6.4e-19 97.1 64 70.3
Aa31LG11G14900 Aethionema arabicum HOM05D007470 ORTHO05D009337 8.3e-19 96.7 64 70.3
HanXRQChr17g0551531 Helianthus annuus HOM05D007470 ORTHO05D009337 8.3e-19 96.7 64 70.3
Lj7A611T38 Lonicera japonica HOM05D007470 ORTHO05D009337 8.3e-19 96.7 62 72.6
RcHm_v2.0_Chr2g0175931 Rosa chinensis HOM05D007470 ORTHO05D009337 8.3e-19 96.7 64 71.9
Sc03g0006360 Simmondsia chinensis HOM05D007470 ORTHO05D009337 1.1e-18 96.3 64 71.9
C09p63010 Brassica napus HOM05D007470 ORTHO05D009337 1.4e-18 95.9 64 68.8
Prupe.3G308400 Prunus persica HOM05D007470 ORTHO05D009337 1.4e-18 95.9 64 73.4
TWI34G0784 Tripterygium wilfordii HOM05D007470 ORTHO05D009337 1.4e-18 95.9 64 71.9
AT5G14100 Arabidopsis thaliana HOM05D007470 ORTHO05D009337 1.9e-18 95.5 64 68.8
SalBow4G2156 Salvia bowleyana HOM05D007470 ORTHO05D009337 1.9e-18 95.5 64 68.8
Atru.chr6.2593 Acer truncatum HOM05D007470 ORTHO05D009337 2.4e-18 95.1 64 71.9
Medtr7g028600 Medicago truncatula HOM05D007470 ORTHO05D009337 2.4e-18 95.1 64 70.3
Psat3g162680 Pisum sativum HOM05D007470 ORTHO05D009337 2.4e-18 95.1 64 70.3
Ciclev10016219m.g Citrus clementina HOM05D007470 ORTHO05D009337 3.2e-18 94.7 64 71.9
Cc02_g35820 Coffea canephora HOM05D007470 ORTHO05D009337 3.2e-18 94.7 64 70.3
Migut.F00049 Erythranthe guttata HOM05D007470 ORTHO05D009337 4.1e-18 94.4 64 68.8
FAN02G0284 Fragaria x ananassa HOM05D007470 ORTHO05D009337 4.1e-18 94.4 64 70.3
Lsat_1_v5_gn_0_3201 Lactuca sativa HOM05D007470 ORTHO05D009337 4.1e-18 94.4 64 70.3
Nitab4.5_0000760g0070 Nicotiana tabacum HOM05D007470 ORTHO05D009337 4.1e-18 94.4 66 66.7
PSO017G3529 Papaver somniferum HOM05D007470 ORTHO05D009337 4.1e-18 94.4 64 73.4
PSO478G1374 Papaver somniferum HOM05D007470 ORTHO05D009337 4.1e-18 94.4 64 73.4
Os11g0490800 Oryza sativa ssp. japonica HOM05D007470 ORTHO05D009337 5.4e-18 94.0 64 67.2
Glyma.19G094500 Glycine max HOM05D007470 ORTHO05D009337 7.1e-18 93.6 64 68.8
CSS0031207 Camellia sinensis var. sinensis HOM05D007470 ORTHO05D009337 9.2e-18 93.2 70 64.3
CsaV3_2G034020 Cucumis sativus L. HOM05D007470 ORTHO05D009337 9.2e-18 93.2 64 68.8
Sed0023625 Sechium edule HOM05D007470 ORTHO05D009337 9.2e-18 93.2 64 68.8
Carub.0006s1229 Capsella rubella HOM05D007470 ORTHO05D009337 1.2e-17 92.8 64 67.2
SGA_v2.0_scaffold253G45183 Striga asiatica HOM05D007470 ORTHO05D009337 1.2e-17 92.8 64 68.8
vmacro05972 Vaccinium macrocarpon HOM05D007470 ORTHO05D009337 1.2e-17 92.8 64 70.3
Zm00001eb112830 Zea mays HOM05D007470 ORTHO05D009337 1.2e-17 92.8 64 70.3
CARHR199250 Cardamine hirsuta HOM05D007470 ORTHO05D009337 1.6e-17 92.4 64 67.2
Nitab4.5_0003376g0110 Nicotiana tabacum HOM05D007470 ORTHO05D009337 1.6e-17 92.4 62 69.4
Rhsim10G0004900 Rhododendron simsii HOM05D007470 ORTHO05D009337 1.6e-17 92.4 64 70.3
Thecc.04G040000 Theobroma cacao HOM05D007470 ORTHO05D009337 1.6e-17 92.4 64 68.8
MELO3C008174.2 Cucumis melo HOM05D007470 ORTHO05D009337 2.1e-17 92.0 64 68.8
Eucgr.I01631 Eucalyptus grandis HOM05D007470 ORTHO05D009337 2.1e-17 92.0 64 68.8
Phvul.001G088400 Phaseolus vulgaris HOM05D007470 ORTHO05D009337 2.1e-17 92.0 64 68.8
DCAR_019191 Daucus carota HOM05D007470 ORTHO05D009337 4.6e-17 90.9 64 65.6
Gohir.A10G071600 Gossypium hirsutum HOM05D007470 ORTHO05D009337 4.6e-17 90.9 64 67.2
Cpa.g.sc70.121 Carica papaya HOM05D007470 ORTHO05D009337 6.0e-17 90.5 69 63.8
HPP92_024734 Vanilla planifolia HOM05D007470 ORTHO05D009337 6.0e-17 90.5 64 67.2
Gohir.D10G079400 Gossypium hirsutum HOM05D007470 ORTHO05D009337 7.8e-17 90.1 64 67.2
Gorai.011G086500 Gossypium raimondii HOM05D007470 ORTHO05D009337 7.8e-17 90.1 64 67.2
GSVIVG01033060001 Vitis vinifera HOM05D007470 ORTHO05D009337 7.8e-17 90.1 64 67.2
Solyc02g068180.3 Solanum lycopersicum HOM05D007470 ORTHO05D009337 1.0e-16 89.7 64 67.2
Sopen02g017280 Solanum pennellii HOM05D007470 ORTHO05D009337 1.0e-16 89.7 64 67.2
Peaxi162Scf00304g00836 Petunia axillaris HOM05D007470 ORTHO05D009337 1.3e-16 89.4 64 65.6
Lj1g0008589 Lotus japonicus HOM05D007470 ORTHO05D009337 1.7e-16 89.0 64 65.6
CAN.G1525.7 Capsicum annuum HOM05D007470 ORTHO05D009337 1.1e-15 86.3 64 62.5
unitig_0.g1935 Utricularia gibba HOM05D007470 ORTHO05D009337 4.7e-14 80.9 84 51.2
CDE05G2906 Ceratophyllum demersum HOM05D007470 ORTHO05D009337 3.1e-13 78.2 64 59.4
CDE05G3681 Ceratophyllum demersum HOM05D007470 ORTHO05D009337 1.5e-12 75.9 68 55.9
Pp3c3_25680 Physcomitrium patens HOM05D007470 ORTHO05D009337 3.2e-10 68.2 64 59.4
AagrBONN_evm.TU.Sc2ySwM_368.2376 Anthoceros agrestis HOM05D007470 ORTHO05D009337 4.1e-10 67.8 67 61.2
TPR.G8551 Trifolium pratense HOM05D007470 ORTHO05D009337 4.1e-10 67.8 46 67.4
VMungo1383G3071 Vigna mungo HOM05D000808 ORTHO05D009337 1.2e-09 66.2 45 66.7
Mapoly0035s0112 Marchantia polymorpha HOM05D007470 ORTHO05D009337 2.7e-09 65.1 64 53.1
Nitab4.5_0010271g0010 Nicotiana tabacum HOM05D007470 ORTHO05D009337 4.6e-09 64.3 48 60.4
ClCG11G009420 Citrullus lanatus HOM05D007470 ORTHO05D009337 8.7e-08 60.1 45 62.2
SMO367G1290 Selaginella moellendorffii HOM05D007470 ORTHO05D009337 2.5e-07 58.5 65 55.4
CBR_g57502 Chara braunii HOM05D007470 ORTHO05D009337 4.7e-06 54.3 97 38.1
Nitab4.5_0001892g0140 Nicotiana tabacum HOM05D007470 ORTHO05D009337 4.7e-06 54.3 48 52.1


User provided reference genes

Program Settings