Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0083G069 Amborella trichopoda HOM05D000384 ORTHO05D006260 3.9e-65 251.5 148 100.0
Oeu031225.1 Olea europaea HOM05D000384 ORTHO05D006260 1.0e-49 200.3 148 70.3
Oeu031229.1 Olea europaea HOM05D000384 ORTHO05D006260 1.0e-49 200.3 148 70.3
Nitab4.5_0007368g0020 Nicotiana tabacum HOM05D000384 ORTHO05D006260 1.8e-49 199.5 147 67.3
Nitab4.5_0007474g0030 Nicotiana tabacum HOM05D000384 ORTHO05D006260 2.3e-49 199.1 144 70.1
Oeu050282.1 Olea europaea HOM05D000384 ORTHO05D006260 4.0e-49 198.4 148 75.0
PGSC0003DMG400016332 Solanum tuberosum HOM05D000384 ORTHO05D006260 4.0e-49 198.4 144 69.4
TAR636G3061 Trochodendron aralioides HOM05D000384 ORTHO05D006260 4.0e-49 198.4 143 69.2
Zm00001eb114150 Zea mays HOM05D000384 ORTHO05D006260 5.2e-49 198.0 145 71.7
Medtr3g007250 Medicago truncatula HOM05D000384 ORTHO05D006260 6.8e-49 197.6 148 66.9
Peaxi162Scf00579g00001 Petunia axillaris HOM05D000384 ORTHO05D006260 8.8e-49 197.2 144 68.8
GSVIVG01017982001 Vitis vinifera HOM05D000384 ORTHO05D006260 8.8e-49 197.2 149 69.1
Dinv44537 Davidia involucrata HOM05D000384 ORTHO05D000468 1.2e-48 196.8 145 69.7
Glyma.06G316000 Glycine max HOM05D000384 ORTHO05D006260 1.5e-48 196.4 145 67.6
Glyma.13G124100 Glycine max HOM05D000384 ORTHO05D006260 2.0e-48 196.1 145 67.6
MBI11_g07539_MAGBIO Magnolia biondii HOM05D000384 ORTHO05D006260 2.0e-48 196.1 143 69.2
Psat0s3755g0120 Pisum sativum HOM05D000384 ORTHO05D006260 2.0e-48 196.1 148 66.2
TPR.G25531 Trifolium pratense HOM05D000384 ORTHO05D006260 2.0e-48 196.1 148 66.2
QL06p002227 Quercus lobata HOM05D000384 ORTHO05D006260 2.6e-48 195.7 139 68.3
Nn3g18529 Nelumbo nucifera HOM05D000384 ORTHO05D006260 3.4e-48 195.3 144 68.8
Zm00001eb415970 Zea mays HOM05D000384 ORTHO05D006260 3.4e-48 195.3 145 70.3
Haze_00893 Corylus avellana HOM05D000384 ORTHO05D006260 5.7e-48 194.5 140 70.0
Glyma.05G087300 Glycine max HOM05D000384 ORTHO05D006260 7.5e-48 194.1 145 66.9
Phvul.008G161600 Phaseolus vulgaris HOM05D000384 ORTHO05D006260 7.5e-48 194.1 145 66.2
arahy.Tifrunner.gnm1.ann1.JHWM2T Arachis hypogaea HOM05D000384 ORTHO05D006260 9.8e-48 193.7 149 67.8
arahy.Tifrunner.gnm1.ann1.U3DZXE Arachis hypogaea HOM05D000384 ORTHO05D006260 9.8e-48 193.7 149 67.8
Ca_14031_v3 Cicer arietinum L. HOM05D000384 ORTHO05D006260 9.8e-48 193.7 148 65.5
MSTRG.24739 Avicennia marina HOM05D000384 ORTHO05D006260 1.3e-47 193.4 148 66.9
Hund25029 Selenicereus undatus HOM05D000384 ORTHO05D006260 1.7e-47 193.0 139 72.7
VMungo0720G1921 Vigna mungo HOM05D000384 ORTHO05D006260 1.7e-47 193.0 143 66.4
CAN.G136.5 Capsicum annuum HOM05D000384 ORTHO05D006260 2.2e-47 192.6 144 70.1
TWI09G1519 Tripterygium wilfordii HOM05D000384 ORTHO05D006260 2.2e-47 192.6 149 67.8
arahy.Tifrunner.gnm1.ann1.T2NEZJ Arachis hypogaea HOM05D000384 ORTHO05D006260 2.8e-47 192.2 139 69.1
CSS0025710 Camellia sinensis var. sinensis HOM05D000384 ORTHO05D006260 2.8e-47 192.2 149 67.8
CSS0048526 Camellia sinensis var. sinensis HOM05D000384 ORTHO05D006260 2.8e-47 192.2 149 67.8
ClCG05G005160 Citrullus lanatus HOM05D000384 ORTHO05D006260 2.8e-47 192.2 146 69.9
Migut.N00188 Erythranthe guttata HOM05D000384 ORTHO05D006260 3.7e-47 191.8 143 67.8
CAN.G1280.23 Capsicum annuum HOM05D000384 ORTHO05D006260 4.8e-47 191.4 146 67.8
CsaV3_5G038350 Cucumis sativus L. HOM05D000384 ORTHO05D006260 6.3e-47 191.0 146 69.2
Lalb_Chr19g0132471 Lupinus albus HOM05D000384 ORTHO05D006260 6.3e-47 191.0 149 65.8
Sopen06g018540 Solanum pennellii HOM05D000384 ORTHO05D006260 6.3e-47 191.0 144 68.8
SGA_v2.0_scaffold522G52709 Striga asiatica HOM05D000384 ORTHO05D006260 6.3e-47 191.0 148 66.2
Atru.chr4.2459 Acer truncatum HOM05D000384 ORTHO05D006260 1.1e-46 190.3 147 64.6
CSS0003915 Camellia sinensis var. sinensis HOM05D000384 ORTHO05D006260 1.1e-46 190.3 139 69.8
Ciclev10006154m.g Citrus clementina HOM05D000384 ORTHO05D006260 1.1e-46 190.3 140 67.1
Gohir.A10G210600 Gossypium hirsutum HOM05D000384 ORTHO05D006260 1.1e-46 190.3 148 65.5
EL10Ac4g08427 Beta vulgaris HOM05D000384 ORTHO05D006260 1.4e-46 189.9 139 68.3
CANSAT64G0565 Cannabis sativa HOM05D000384 ORTHO05D006260 1.4e-46 189.9 144 66.7
Cc03_g03830 Coffea canephora HOM05D000384 ORTHO05D006260 1.4e-46 189.9 139 70.5
Gohir.D10G218900 Gossypium hirsutum HOM05D000384 ORTHO05D006260 1.4e-46 189.9 148 65.5
Gorai.011G245600 Gossypium raimondii HOM05D000384 ORTHO05D006260 1.4e-46 189.9 148 65.5
Sed0018578 Sechium edule HOM05D000384 ORTHO05D006260 1.4e-46 189.9 139 69.8
COL.COLO4_10907 Corchorus olitorius HOM05D000384 ORTHO05D006260 1.8e-46 189.5 148 65.5
Manes.03G178300 Manihot esculenta HOM05D000384 ORTHO05D006260 1.8e-46 189.5 144 67.4
RcHm_v2.0_Chr1g0362551 Rosa chinensis HOM05D000384 ORTHO05D006260 1.8e-46 189.5 144 66.0
RcHm_v2.0_Chr4g0387021 Rosa chinensis HOM05D000384 ORTHO05D006260 1.8e-46 189.5 144 66.0
Actinidia40142 Actinidia chinensis HOM05D000384 ORTHO05D006260 2.4e-46 189.1 143 67.8
MELO3C022017.2 Cucumis melo HOM05D000384 ORTHO05D006260 2.4e-46 189.1 146 69.2
Cfa015651 Carpinus fangiana HOM05D000384 ORTHO05D006260 3.1e-46 188.7 141 68.8
Duzib114G0643 Durio zibethinus HOM05D000384 ORTHO05D006260 3.1e-46 188.7 146 67.1
Eucgr.H03463 Eucalyptus grandis HOM05D000384 ORTHO05D006260 3.1e-46 188.7 134 67.9
Duzib128G1753 Durio zibethinus HOM05D000384 ORTHO05D006260 4.1e-46 188.3 146 65.8
Lj3g0015206 Lotus japonicus HOM05D000384 ORTHO05D006260 4.1e-46 188.3 142 64.8
Os12g0485800 Oryza sativa ssp. japonica HOM05D000384 ORTHO05D006260 4.1e-46 188.3 143 67.1
FAN07G0857 Fragaria x ananassa HOM05D000384 ORTHO05D006260 5.4e-46 188.0 147 64.6
TWI53G0398 Tripterygium wilfordii HOM05D000384 ORTHO05D006260 5.4e-46 188.0 148 66.9
arahy.Tifrunner.gnm1.ann1.K8JXLT Arachis hypogaea HOM05D000384 ORTHO05D006260 7.0e-46 187.6 148 66.9
Atru.chr4.720 Acer truncatum HOM05D000384 ORTHO05D006260 9.1e-46 187.2 149 66.4
Aqoxy1G01533 Aquilegia oxysepala HOM05D000384 ORTHO05D006260 9.1e-46 187.2 140 66.4
Aqoxy5G00465 Aquilegia oxysepala HOM05D000384 ORTHO05D006260 9.1e-46 187.2 140 66.4
Potri.008G153900 Populus trichocarpa HOM05D000384 ORTHO05D006260 9.1e-46 187.2 139 67.6
Potri.001G240200 Populus trichocarpa HOM05D000384 ORTHO05D006260 1.2e-45 186.8 140 67.9
CiPaw.02G097700 Carya illinoinensis HOM05D000384 ORTHO05D006260 2.7e-45 185.7 139 66.2
RcHm_v2.0_Chr4g0416141 Rosa chinensis HOM05D000384 ORTHO05D006260 2.7e-45 185.7 144 65.3
Thecc.10G059100 Theobroma cacao HOM05D000384 ORTHO05D006260 2.7e-45 185.7 146 65.8
AUR62013951 Chenopodium quinoa HOM05D000384 ORTHO05D006260 3.5e-45 185.3 147 66.7
Sc19g0004110 Simmondsia chinensis HOM05D000384 ORTHO05D006260 3.5e-45 185.3 148 64.9
Sabra16G0144900 Salix brachista HOM05D000384 ORTHO05D006260 4.5e-45 184.9 140 66.4
Cpa.g.sc58.101 Carica papaya HOM05D000384 ORTHO05D006260 5.9e-45 184.5 139 66.9
AUR62019660 Chenopodium quinoa HOM05D000384 ORTHO05D006260 5.9e-45 184.5 148 66.2
Prupe.1G014300 Prunus persica HOM05D000384 ORTHO05D006260 5.9e-45 184.5 143 65.0
Os11g0568500 Oryza sativa ssp. japonica HOM05D000384 ORTHO05D006260 7.7e-45 184.1 146 69.2
Rhsim04G0201900 Rhododendron simsii HOM05D000384 ORTHO05D006260 7.7e-45 184.1 141 68.1
FvH4_4g15650 Fragaria vesca HOM05D000384 ORTHO05D006260 1.3e-44 183.3 144 64.6
FAN12G1863 Fragaria x ananassa HOM05D000384 ORTHO05D006260 1.3e-44 183.3 144 64.6
FAN17G0123 Fragaria x ananassa HOM05D000384 ORTHO05D006260 1.3e-44 183.3 144 63.9
FAN22G1586 Fragaria x ananassa HOM05D000384 ORTHO05D006260 1.3e-44 183.3 144 63.9
Hma1.2p1_0745F.1_g212050 Hydrangea macrophylla HOM05D000384 ORTHO05D006260 2.3e-44 182.6 139 66.2
Lj3E734T1 Lonicera japonica HOM05D000384 ORTHO05D006260 2.3e-44 182.6 144 66.0
PSO210G4801 Papaver somniferum HOM05D000384 ORTHO05D006260 2.3e-44 182.6 138 65.9
Sabra08G0117400 Salix brachista HOM05D000384 ORTHO05D006260 2.9e-44 182.2 143 65.0
CiPaw.01G166600 Carya illinoinensis HOM05D000384 ORTHO05D006260 3.8e-44 181.8 139 66.2
DCAR_024164 Daucus carota HOM05D000384 ORTHO05D006260 3.8e-44 181.8 143 66.4
PSO832G3877 Papaver somniferum HOM05D000384 ORTHO05D006260 6.5e-44 181.0 138 65.2
unitig_699.g19994 Utricularia gibba HOM05D000384 ORTHO05D006260 6.5e-44 181.0 143 65.7
DCAR_027219 Daucus carota HOM05D000384 ORTHO05D006260 1.1e-43 180.3 143 65.7
PGR004G2612 Punica granatum HOM05D000384 ORTHO05D006260 1.1e-43 180.3 136 66.9
ECA247G4089 Erigeron canadensis HOM05D000384 ORTHO05D006260 1.5e-43 179.9 144 65.3
SalBow3G1001 Salvia bowleyana HOM05D000384 ORTHO05D006260 1.9e-43 179.5 134 70.1
MD16G1194400 Malus domestica HOM05D000384 ORTHO05D006260 3.3e-43 178.7 141 63.8
THA.LOC104803028 Tarenaya hassleriana HOM05D000384 ORTHO05D006260 7.2e-43 177.6 149 61.1
HanXRQChr08g0229211 Helianthus annuus HOM05D000384 ORTHO05D006260 1.2e-42 176.8 144 63.9
Sc13g0004430 Simmondsia chinensis HOM05D000384 ORTHO05D006260 1.2e-42 176.8 138 63.0
THA.LOC104822267 Tarenaya hassleriana HOM05D000384 ORTHO05D006260 3.6e-42 175.3 149 61.1
Lsat_1_v5_gn_9_18461 Lactuca sativa HOM05D000384 ORTHO05D006260 1.8e-41 172.9 134 64.2
Solyc06g053460.3 Solanum lycopersicum HOM05D000384 ORTHO05D006260 1.8e-41 172.9 125 72.0
CARHR098380 Cardamine hirsuta HOM05D000384 ORTHO05D006260 5.2e-41 171.4 151 60.3
Aa31LG8G9040 Aethionema arabicum HOM05D000384 ORTHO05D006260 8.9e-41 170.6 149 60.4
SEGI_35673 Sequoiadendron giganteum HOM05D000384 ORTHO05D006260 1.2e-40 170.2 144 60.4
Thhalv10021707m.g Eutrema salsugineum HOM05D000384 ORTHO05D006260 3.4e-40 168.7 150 59.3
Sp3g20250 Schrenkiella parvula HOM05D000384 ORTHO05D006260 3.4e-40 168.7 150 68.7
AT3G22480 Arabidopsis thaliana HOM05D000384 ORTHO05D006260 1.8e-38 162.9 150 58.0
BraA03t13424Z Brassica rapa HOM05D000384 ORTHO05D006260 5.4e-38 161.4 142 59.9
BcaC01g03444 Brassica carinata HOM05D000384 ORTHO05D006260 7.0e-38 161.0 140 57.9
A03p42770 Brassica napus HOM05D000384 ORTHO05D006260 7.0e-38 161.0 143 59.4
A05p26280 Brassica napus HOM05D000384 ORTHO05D006260 9.2e-38 160.6 138 59.4
C03p52530 Brassica napus HOM05D000384 ORTHO05D006260 1.2e-37 160.2 140 57.9
BcaB04g19201 Brassica carinata HOM05D000384 ORTHO05D006260 1.6e-37 159.8 135 59.3
BcaC05g28063 Brassica carinata HOM05D000384 ORTHO05D006260 1.6e-37 159.8 139 58.3
C05p40760 Brassica napus HOM05D000384 ORTHO05D006260 1.6e-37 159.8 139 58.3
BolC5t32821H Brassica oleracea HOM05D000384 ORTHO05D006260 1.6e-37 159.8 139 58.3
BraA05t21503Z Brassica rapa HOM05D000384 ORTHO05D006260 2.0e-37 159.5 136 59.6
BolC3t17522H Brassica oleracea HOM05D000384 ORTHO05D006260 3.5e-37 158.7 140 57.1
Ah.04g163960 Amaranthus hybridus HOM05D000384 ORTHO05D006260 5.9e-37 157.9 144 65.3
Carub.0003s2264 Capsella rubella HOM05D000384 ORTHO05D006260 1.0e-36 157.1 150 57.3
C05p40680 Brassica napus HOM05D000384 ORTHO05D006260 2.9e-36 155.6 144 58.3
AL3G36790 Arabidopsis lyrata HOM05D000384 ORTHO05D006260 3.8e-36 155.2 150 56.7
BolC5t32807H Brassica oleracea HOM05D000384 ORTHO05D006260 3.8e-36 155.2 144 58.3
BcaB06g26358 Brassica carinata HOM05D000384 ORTHO05D006260 5.0e-36 154.8 136 55.9
TAR365G0396 Trochodendron aralioides HOM05D000384 ORTHO05D006260 5.0e-36 154.8 120 68.3
Mapoly0049s0105 Marchantia polymorpha HOM05D000384 ORTHO05D006260 1.9e-35 152.9 135 60.0
HanXRQChr04g0103741 Helianthus annuus HOM05D000384 ORTHO05D006260 3.6e-34 148.7 116 63.8
HPP92_018608 Vanilla planifolia HOM05D000384 ORTHO05D006260 6.1e-34 147.9 131 59.5
SMO169G0080 Selaginella moellendorffii HOM05D000384 ORTHO05D006260 1.0e-33 147.1 146 54.1
CBR_g42063 Chara braunii HOM05D000384 ORTHO05D006260 5.2e-33 144.8 131 58.8
AagrBONN_evm.TU.Sc2ySwM_344.1360 Anthoceros agrestis HOM05D000384 ORTHO05D006260 1.2e-32 143.7 137 51.8
Pp3c23_10300 Physcomitrium patens HOM05D000384 ORTHO05D006260 1.6e-26 123.2 139 50.4
AagrBONN_evm.TU.Sc2ySwM_228.3583 Anthoceros agrestis HOM05D000384 ORTHO05D006260 2.3e-25 119.4 120 48.3
Hma1.2p1_0602F.1_g187390 Hydrangea macrophylla HOM05D000384 ORTHO05D006260 1.7e-23 113.2 109 56.9
HPP92_018610 Vanilla planifolia HOM05D000384 ORTHO05D006260 2.9e-23 112.5 90 70.0
Pp3c24_3120 Physcomitrium patens HOM05D000384 ORTHO05D006260 6.4e-23 111.3 140 45.7
BcaC05g28047 Brassica carinata HOM05D000384 ORTHO05D006260 6.0e-21 104.8 95 58.9
MCO05G108 Micromonas commoda HOM05D000384 ORTHO05D006260 1.5e-19 100.1 130 40.8
Cre07.g342250 Chlamydomonas reinhardtii HOM05D000384 ORTHO05D006260 8.1e-18 94.4 138 38.4
CDE09G0159 Ceratophyllum demersum HOM05D000384 ORTHO05D006260 6.0e-13 78.2 55 70.9
PRCOL_00004688 Prasinoderma coloniale HOM05D000384 ORTHO05D006260 1.6e-10 70.1 87 42.5


User provided reference genes

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