Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 6.8e-290 1000.0 515 100.0
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 3.3e-103 379.8 506 46.6
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 8.0e-97 358.6 519 40.7
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 2.9e-91 340.1 511 40.3
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 2.5e-74 283.9 492 37.2
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 2.1e-73 280.8 503 37.0
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 6.4e-70 269.2 488 37.7
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 6.0e-68 262.7 509 35.4
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 1.7e-67 261.2 297 50.2
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 8.1e-65 252.3 295 51.2
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.1e-64 251.9 265 52.8
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 5.2e-64 249.6 502 35.5
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 8.9e-64 248.8 265 52.5
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 2.0e-63 247.7 265 52.5
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 1.3e-62 245.0 497 33.6
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 1.9e-61 241.1 288 48.6
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 4.1e-61 240.0 258 53.5
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 5.4e-61 239.6 254 53.1
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 1.6e-60 238.0 271 50.9
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 2.7e-60 237.3 259 51.0
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 4.6e-60 236.5 506 32.6
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 7.8e-60 235.7 320 44.7
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 7.8e-60 235.7 269 49.8
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 3.9e-59 233.4 319 45.8
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 8.6e-59 232.3 283 47.7
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 8.6e-59 232.3 285 49.8
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 1.5e-58 231.5 257 51.0
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 1.8e-56 224.6 275 46.9
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 1.8e-56 224.6 297 45.1
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 2.3e-56 224.2 261 47.5
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 4.0e-56 223.4 275 46.9
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 6.8e-56 222.6 275 46.9
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 8.9e-56 222.2 274 47.1
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 2.0e-55 221.1 285 46.0
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 2.6e-55 220.7 261 46.7
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 5.8e-55 219.5 274 46.7
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 7.6e-55 219.2 243 49.4
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 7.6e-55 219.2 261 47.5
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 9.9e-55 218.8 285 45.3
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 9.9e-55 218.8 255 47.8
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 1.3e-54 218.4 488 34.4
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 1.3e-54 218.4 257 49.0
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 2.2e-54 217.6 273 46.9
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 3.7e-54 216.9 253 50.2
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 4.9e-54 216.5 230 51.3
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 4.9e-54 216.5 273 45.8
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 3.2e-53 213.8 255 50.6
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 5.4e-53 213.0 505 30.1
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 7.1e-53 212.6 283 44.2
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 3.5e-52 210.3 322 41.3
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 1.0e-51 208.8 508 31.5
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 2.3e-51 207.6 278 44.2
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.3e-51 207.6 255 46.3
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 1.9e-50 204.5 260 46.2
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 3.3e-50 203.8 276 44.2
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 4.3e-50 203.4 243 49.0
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 5.6e-50 203.0 251 45.0
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 5.6e-50 203.0 265 44.5
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 1.2e-49 201.8 257 46.7
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 1.6e-49 201.4 261 42.9
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 3.6e-49 200.3 290 43.8
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 4.7e-49 199.9 246 48.8
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 4.0e-48 196.8 496 30.0
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 8.9e-48 195.7 253 47.0
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 4.4e-47 193.4 253 47.0
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 5.8e-47 193.0 220 48.6
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 7.6e-47 192.6 262 42.0
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 1.1e-45 188.7 191 53.9
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 1.6e-44 184.9 262 42.0
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 3.0e-43 180.6 215 47.0
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 3.9e-43 180.3 224 45.1
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 4.3e-42 176.8 254 43.7
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 4.3e-42 176.8 240 45.8
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 5.6e-42 176.4 206 49.5
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 7.3e-42 176.0 203 49.8
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.2e-39 168.7 242 42.6
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.2e-38 164.5 232 44.0
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 4.9e-38 163.3 310 38.1
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.9e-37 161.4 213 44.1
SEGI_10687 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 4.2e-37 160.2 122 62.3
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 5.4e-37 159.8 455 27.3
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 3.0e-35 154.1 260 39.6
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 1.5e-34 151.8 177 46.3
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 1.2e-31 142.1 352 33.2
SMO329G0073 Selaginella moellendorffii HOM05D007522 ORTHO05D009518 4.9e-30 136.7 121 57.0
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 1.1e-29 135.6 256 39.1
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 5.4e-29 133.3 500 26.8
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 9.3e-29 132.5 271 33.6
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 5.1e-27 126.7 460 26.5
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 6.7e-27 126.3 107 60.7
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 1.2e-23 115.5 154 43.5
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 1.4e-21 108.6 91 64.8
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 5.5e-21 106.7 136 42.6
SEGI_07807 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 4.5e-15 87.0 74 58.1
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 2.1e-12 78.2 129 36.4
Cfa021487 Carpinus fangiana HOM05D000146 ORTHO05D007947 3.0e-11 74.3 112 37.5
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 6.7e-11 73.2 133 30.8
VMungo1309G0092 Vigna mungo HOM05D007522 ORTHO05D009518 6.3e-09 66.6 142 28.9
Hund03006 Selenicereus undatus HOM05D007522 ORTHO05D009518 2.6e-07 61.2 117 35.9
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 6.5e-06 56.6 96 37.5


User provided reference genes

Program Settings