Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0083G010 Amborella trichopoda HOM05D007454 ORTHO05D009382 1.0e-81 306.6 149 100.0
ATR0260G001 Amborella trichopoda HOM05D007454 ORTHO05D009382 1.6e-61 239.6 115 100.0
TAR383G0100 Trochodendron aralioides HOM05D007454 ORTHO05D009382 1.9e-11 73.2 82 46.3
TAR626G1515 Trochodendron aralioides HOM05D007454 ORTHO05D009382 4.3e-11 72.0 140 35.7
TWI34G0809 Tripterygium wilfordii HOM05D007454 ORTHO05D009382 2.8e-10 69.3 159 34.0
MD15G1117600 Malus domestica HOM05D007454 ORTHO05D009382 3.7e-10 68.9 99 36.4
Cfa013203 Carpinus fangiana HOM05D007454 ORTHO05D009382 4.8e-10 68.6 143 34.3
Ciclev10009811m.g Citrus clementina HOM05D007454 ORTHO05D009382 6.2e-10 68.2 73 41.1
Haze_21608 Corylus avellana HOM05D007454 ORTHO05D009382 3.1e-09 65.9 138 34.1
HanXRQChr01g0030031 Helianthus annuus HOM05D007454 ORTHO05D009382 5.3e-09 65.1 123 38.2
Hund25693 Selenicereus undatus HOM05D007454 ORTHO05D009382 6.9e-09 64.7 125 34.4
Atru.chr7.2345 Acer truncatum HOM05D007454 ORTHO05D009382 9.0e-09 64.3 101 35.6
FAN24G1693 Fragaria x ananassa HOM05D007454 ORTHO05D009382 9.0e-09 64.3 98 34.7
Potri.006G248300 Populus trichocarpa HOM05D007454 ORTHO05D009382 9.0e-09 64.3 131 35.1
Aqoxy7G01923 Aquilegia oxysepala HOM05D007454 ORTHO05D009382 1.2e-08 63.9 118 35.6
Gorai.007G350400 Gossypium raimondii HOM05D007454 ORTHO05D009382 1.2e-08 63.9 143 33.6
Gohir.D11G320200 Gossypium hirsutum HOM05D007454 ORTHO05D009382 1.5e-08 63.5 127 34.6
Duzib150G0674 Durio zibethinus HOM05D007454 ORTHO05D009382 2.0e-08 63.2 127 33.9
QL12p031592 Quercus lobata HOM05D007454 ORTHO05D009382 2.0e-08 63.2 147 32.0
COL.COLO4_24027 Corchorus olitorius HOM05D007454 ORTHO05D009382 2.6e-08 62.8 109 37.6
FAN15G1931 Fragaria x ananassa HOM05D007454 ORTHO05D009382 2.6e-08 62.8 108 34.3
FAN20G1122 Fragaria x ananassa HOM05D007454 ORTHO05D009382 2.6e-08 62.8 107 32.7
FAN27G1093 Fragaria x ananassa HOM05D007454 ORTHO05D009382 2.6e-08 62.8 107 32.7
Gohir.A11G304800 Gossypium hirsutum HOM05D007454 ORTHO05D009382 2.6e-08 62.8 142 30.3
Nn2g11862 Nelumbo nucifera HOM05D007454 ORTHO05D009382 2.6e-08 62.8 101 37.6
Thecc.09G146500 Theobroma cacao HOM05D007454 ORTHO05D009382 2.6e-08 62.8 114 35.1
Sabra06G0194300 Salix brachista HOM05D007454 ORTHO05D009382 3.4e-08 62.4 128 35.2
Solyc08g067630.3 Solanum lycopersicum HOM05D007454 ORTHO05D009382 3.4e-08 62.4 151 32.5
CiPaw.08G014500 Carya illinoinensis HOM05D007454 ORTHO05D009382 4.5e-08 62.0 104 36.5
CDE07G1568 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 4.5e-08 62.0 108 38.9
FvH4_2g29860 Fragaria vesca HOM05D007454 ORTHO05D009382 4.5e-08 62.0 98 33.7
MBI01_g03566_MAGBIO Magnolia biondii HOM05D007454 ORTHO05D009382 4.5e-08 62.0 76 42.1
CDE06G2386 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 7.6e-08 61.2 114 41.2
Manes.03G018900 Manihot esculenta HOM05D007454 ORTHO05D009382 7.6e-08 61.2 105 36.2
RcHm_v2.0_Chr6g0298931 Rosa chinensis HOM05D007454 ORTHO05D009382 9.9e-08 60.8 107 33.6
EL10Ac2g02557 Beta vulgaris HOM05D007454 ORTHO05D009382 1.3e-07 60.5 154 33.1
PGSC0003DMG400002261 Solanum tuberosum HOM05D007454 ORTHO05D009382 1.7e-07 60.1 117 31.6
Cpa.g.sc603.1 Carica papaya HOM05D007454 ORTHO05D009382 2.2e-07 59.7 99 36.4
CDE06G2168 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 2.2e-07 59.7 76 48.7
Lsat_1_v5_gn_1_45380 Lactuca sativa HOM05D007454 ORTHO05D009382 2.9e-07 59.3 134 32.1
Actinidia29311 Actinidia chinensis HOM05D007454 ORTHO05D009382 4.9e-07 58.5 83 37.3
ECA248G0251 Erigeron canadensis HOM05D007454 ORTHO05D009382 4.9e-07 58.5 117 33.3
Rhsim02G0189300 Rhododendron simsii HOM05D007454 ORTHO05D009382 4.9e-07 58.5 112 33.0
Prupe.1G471000 Prunus persica HOM05D007454 ORTHO05D009382 6.4e-07 58.2 128 30.5
CiPaw.07G219000 Carya illinoinensis HOM05D007454 ORTHO05D009382 8.4e-07 57.8 34 67.6
Phvul.009G096400 Phaseolus vulgaris HOM05D007454 ORTHO05D009382 8.4e-07 57.8 146 30.8
Cc11_g01380 Coffea canephora HOM05D007454 ORTHO05D009382 1.1e-06 57.4 67 47.8
Dinv11595 Davidia involucrata HOM05D007454 ORTHO05D009382 1.1e-06 57.4 80 36.2
MD08G1140700 Malus domestica HOM05D007454 ORTHO05D009382 1.4e-06 57.0 108 32.4
CAN.G506.13 Capsicum annuum HOM05D007454 ORTHO05D009382 1.9e-06 56.6 109 34.9
unitig_748.g8205 Utricularia gibba HOM05D007454 ORTHO05D009382 1.9e-06 56.6 77 42.9
Oeu032495.1 Olea europaea HOM05D007454 ORTHO05D009382 2.4e-06 56.2 123 33.3
Actinidia13275 Actinidia chinensis HOM05D007454 ORTHO05D009382 4.2e-06 55.5 76 39.5
arahy.Tifrunner.gnm1.ann1.X4UCF1 Arachis hypogaea HOM05D007454 ORTHO05D009382 4.2e-06 55.5 115 36.5
Nitab4.5_0003201g0010 Nicotiana tabacum HOM05D007454 ORTHO05D009382 4.2e-06 55.5 112 37.5
ClCG05G017140 Citrullus lanatus HOM05D007454 ORTHO05D009382 5.5e-06 55.1 106 35.8
Manes.16G117700 Manihot esculenta HOM05D007454 ORTHO05D009382 5.5e-06 55.1 111 31.5
Zm00001eb296620 Zea mays HOM05D007454 ORTHO05D009382 5.5e-06 55.1 115 38.3
CANSAT11G0218 Cannabis sativa HOM05D007454 ORTHO05D009382 7.1e-06 54.7 38 63.2
DCAR_001472 Daucus carota HOM05D007454 ORTHO05D009382 7.1e-06 54.7 139 30.2


User provided reference genes

Program Settings