Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0071G025 Amborella trichopoda HOM05D004752 ORTHO05D005523 8.5e-44 179.9 86 100.0
PGR042G3757 Punica granatum HOM05D004752 ORTHO05D005523 4.5e-29 131.0 75 85.3
Nitab4.5_0000303g0280 Nicotiana tabacum HOM05D004752 ORTHO05D005523 1.2e-26 122.9 76 76.3
Nitab4.5_0001082g0040 Nicotiana tabacum HOM05D004752 ORTHO05D005523 1.2e-26 122.9 76 76.3
Peaxi162Scf00268g00615 Petunia axillaris HOM05D004752 ORTHO05D005523 1.6e-26 122.5 76 76.3
THA.LOC104809736 Tarenaya hassleriana HOM05D004752 ORTHO05D005523 1.6e-26 122.5 76 78.9
CSS0011118 Camellia sinensis var. sinensis HOM05D004752 ORTHO05D005523 3.6e-26 121.3 75 78.7
CSS0018537 Camellia sinensis var. sinensis HOM05D004752 ORTHO05D005523 3.6e-26 121.3 75 78.7
SalBow6G0286 Salvia bowleyana HOM05D004752 ORTHO05D005523 3.6e-26 121.3 85 70.6
Nn5g27610 Nelumbo nucifera HOM05D004752 ORTHO05D005523 8.0e-26 120.2 83 73.5
Dinv41721 Davidia involucrata HOM05D004752 ORTHO05D005523 1.0e-25 119.8 75 78.7
Duzib211G0386 Durio zibethinus HOM05D004752 ORTHO05D005523 1.0e-25 119.8 74 78.4
Glyma.10G117300 Glycine max HOM05D004752 ORTHO05D005523 1.0e-25 119.8 74 79.7
Glyma.20G068500 Glycine max HOM05D004752 ORTHO05D005523 1.0e-25 119.8 74 79.7
PGR102G0675 Punica granatum HOM05D004752 ORTHO05D005523 2.3e-25 118.6 79 75.9
COL.COLO4_34528 Corchorus olitorius HOM05D004752 ORTHO05D005523 3.0e-25 118.2 74 77.0
Lj5g0024701 Lotus japonicus HOM05D004752 ORTHO05D005523 4.0e-25 117.9 74 77.0
SalBow6G5891 Salvia bowleyana HOM05D004752 ORTHO05D005523 4.0e-25 117.9 74 77.0
Potri.019G081700 Populus trichocarpa HOM05D004752 ORTHO05D005523 5.2e-25 117.5 74 74.3
SalBow6G5456 Salvia bowleyana HOM05D004752 ORTHO05D005523 8.8e-25 116.7 74 73.0
SalBow6G7070 Salvia bowleyana HOM05D004752 ORTHO05D005523 8.8e-25 116.7 74 73.0
Lj6g0009552 Lotus japonicus HOM05D004752 ORTHO05D005523 1.2e-24 116.3 74 77.0
Gohir.A05G250200 Gossypium hirsutum HOM05D004752 ORTHO05D005523 1.5e-24 115.9 73 78.1
Atru.chr13.2410 Acer truncatum HOM05D004752 ORTHO05D005523 2.0e-24 115.5 74 79.7
Carub.0002s1880 Capsella rubella HOM05D004752 ORTHO05D005523 2.0e-24 115.5 76 73.7
Eucgr.F02586 Eucalyptus grandis HOM05D004752 ORTHO05D005523 2.0e-24 115.5 75 76.0
Gohir.A05G250100 Gossypium hirsutum HOM05D004752 ORTHO05D005523 2.0e-24 115.5 73 76.7
Gohir.D05G251900 Gossypium hirsutum HOM05D004752 ORTHO05D005523 2.0e-24 115.5 73 76.7
Gohir.D05G253600 Gossypium hirsutum HOM05D004752 ORTHO05D005523 2.0e-24 115.5 73 76.7
Gorai.009G263300 Gossypium raimondii HOM05D004752 ORTHO05D005523 2.0e-24 115.5 73 76.7
Gorai.009G263400 Gossypium raimondii HOM05D004752 ORTHO05D005523 2.0e-24 115.5 73 76.7
Nitab4.5_0000365g0250 Nicotiana tabacum HOM05D004752 ORTHO05D005523 2.0e-24 115.5 74 74.3
SEGI_26065 Sequoiadendron giganteum HOM05D004752 ORTHO05D005523 2.6e-24 115.2 76 73.7
Thecc.08G186100 Theobroma cacao HOM05D004752 ORTHO05D005523 2.6e-24 115.2 74 75.7
VMungo0720G2181 Vigna mungo HOM05D004752 ORTHO05D005523 2.6e-24 115.2 81 69.1
Aa31LG4G8590 Aethionema arabicum HOM05D004752 ORTHO05D005523 3.3e-24 114.8 76 73.7
Sp5g27090 Schrenkiella parvula HOM05D004752 ORTHO05D005523 3.3e-24 114.8 82 70.7
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 4.4e-24 114.4 76 69.7
BcaB03g14924 Brassica carinata HOM05D004752 ORTHO05D005523 4.4e-24 114.4 82 70.7
BcaB05g24700 Brassica carinata HOM05D004752 ORTHO05D005523 4.4e-24 114.4 86 67.4
BcaC08g45743 Brassica carinata HOM05D004752 ORTHO05D005523 4.4e-24 114.4 82 70.7
BcaC08g46647 Brassica carinata HOM05D004752 ORTHO05D005523 4.4e-24 114.4 82 70.7
BcaC08g46649 Brassica carinata HOM05D004752 ORTHO05D005523 4.4e-24 114.4 82 70.7
BcaC08g46651 Brassica carinata HOM05D004752 ORTHO05D005523 4.4e-24 114.4 82 70.7
BcaC08g46652 Brassica carinata HOM05D004752 ORTHO05D005523 4.4e-24 114.4 82 70.7
C06p46120 Brassica napus HOM05D004752 ORTHO05D005523 4.4e-24 114.4 82 70.7
BolC6t38628H Brassica oleracea HOM05D004752 ORTHO05D005523 4.4e-24 114.4 82 70.7
BolC6t39665H Brassica oleracea HOM05D004752 ORTHO05D005523 4.4e-24 114.4 82 70.7
BraA07t31385Z Brassica rapa HOM05D004752 ORTHO05D005523 4.4e-24 114.4 82 70.7
Sabra19G0093300 Salix brachista HOM05D004752 ORTHO05D005523 4.4e-24 114.4 75 74.7
TPR.G20783 Trifolium pratense HOM05D004752 ORTHO05D005523 4.4e-24 114.4 82 70.7
TAR381G0821 Trochodendron aralioides HOM05D004752 ORTHO05D005523 4.4e-24 114.4 74 78.4
vmacro00760 Vaccinium macrocarpon HOM05D004752 ORTHO05D005523 4.4e-24 114.4 77 71.4
BcaC03g15326 Brassica carinata HOM05D004752 ORTHO05D005523 5.7e-24 114.0 82 70.7
A02p17630 Brassica napus HOM05D004752 ORTHO05D005523 5.7e-24 114.0 82 70.7
A07p38200 Brassica napus HOM05D004752 ORTHO05D005523 5.7e-24 114.0 76 73.7
C02p29310 Brassica napus HOM05D004752 ORTHO05D005523 5.7e-24 114.0 82 70.7
C06p35220 Brassica napus HOM05D004752 ORTHO05D005523 5.7e-24 114.0 76 73.7
BolC2t08982H Brassica oleracea HOM05D004752 ORTHO05D005523 5.7e-24 114.0 82 70.7
BraA02t06809Z Brassica rapa HOM05D004752 ORTHO05D005523 5.7e-24 114.0 82 70.7
Thhalv10019369m.g Eutrema salsugineum HOM05D004752 ORTHO05D005523 5.7e-24 114.0 82 70.7
Lalb_Chr19g0129031 Lupinus albus HOM05D004752 ORTHO05D005523 5.7e-24 114.0 86 67.4
Manes.18G103200 Manihot esculenta HOM05D004752 ORTHO05D005523 5.7e-24 114.0 75 73.3
Potri.013G110600 Populus trichocarpa HOM05D004752 ORTHO05D005523 5.7e-24 114.0 75 74.7
CARHR064830 Cardamine hirsuta HOM05D004752 ORTHO05D005523 7.5e-24 113.6 76 72.4
Hund27095 Selenicereus undatus HOM05D004752 ORTHO05D005523 7.5e-24 113.6 85 67.1
Sc23g0001310 Simmondsia chinensis HOM05D004752 ORTHO05D005523 9.7e-24 113.2 73 75.3
MBI17_g21481_MAGBIO Magnolia biondii HOM05D004752 ORTHO05D005523 1.3e-23 112.8 70 78.6
THA.LOC104816385 Tarenaya hassleriana HOM05D004752 ORTHO05D005523 1.3e-23 112.8 77 70.1
CANSAT80G1056 Cannabis sativa HOM05D004752 ORTHO05D005523 1.7e-23 112.5 74 74.3
Lalb_Chr01g0010501 Lupinus albus HOM05D004752 ORTHO05D005523 1.7e-23 112.5 74 75.7
Sopen06g023680 Solanum pennellii HOM05D004752 ORTHO05D005523 1.7e-23 112.5 76 72.4
PGSC0003DMG400026069 Solanum tuberosum HOM05D004752 ORTHO05D005523 1.7e-23 112.5 76 72.4
A07p30460 Brassica napus HOM05D004752 ORTHO05D005523 2.2e-23 112.1 83 71.1
Medtr1g048960 Medicago truncatula HOM05D004752 ORTHO05D005523 2.2e-23 112.1 82 69.5
Actinidia29420 Actinidia chinensis HOM05D004752 ORTHO05D005523 2.8e-23 111.7 73 74.0
BcaB03g15640 Brassica carinata HOM05D004752 ORTHO05D005523 2.8e-23 111.7 83 71.1
AUR62022705 Chenopodium quinoa HOM05D004752 ORTHO05D005523 2.8e-23 111.7 71 78.9
Gohir.D09G112701 Gossypium hirsutum HOM05D004752 ORTHO05D005523 2.8e-23 111.7 73 71.2
Gorai.006G130300 Gossypium raimondii HOM05D004752 ORTHO05D005523 2.8e-23 111.7 74 71.6
Lalb_Chr03g0036521 Lupinus albus HOM05D004752 ORTHO05D005523 2.8e-23 111.7 74 75.7
PSO782G1292 Papaver somniferum HOM05D004752 ORTHO05D005523 2.8e-23 111.7 75 74.7
QL12p035384 Quercus lobata HOM05D004752 ORTHO05D005523 2.8e-23 111.7 70 77.1
Solyc06g065180.3 Solanum lycopersicum HOM05D004752 ORTHO05D005523 2.8e-23 111.7 76 71.1
EL10Ac1g00098 Beta vulgaris HOM05D004752 ORTHO05D005523 3.7e-23 111.3 73 76.7
AUR62004632 Chenopodium quinoa HOM05D004752 ORTHO05D005523 3.7e-23 111.3 71 77.5
ClCG09G009960 Citrullus lanatus HOM05D004752 ORTHO05D005523 4.8e-23 110.9 73 74.0
MSTRG.1541 Avicennia marina HOM05D004752 ORTHO05D005523 6.3e-23 110.5 74 74.3
Duzib177G0553 Durio zibethinus HOM05D004752 ORTHO05D005523 6.3e-23 110.5 74 71.6
Gohir.D09G112900 Gossypium hirsutum HOM05D004752 ORTHO05D005523 6.3e-23 110.5 74 70.3
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 6.3e-23 110.5 74 75.7
unitig_0.g2130 Utricularia gibba HOM05D004752 ORTHO05D005523 6.3e-23 110.5 86 66.3
Ciclev10002954m.g Citrus clementina HOM05D004752 ORTHO05D005523 8.3e-23 110.2 74 74.3
BraA07t30682Z Brassica rapa HOM05D004752 ORTHO05D005523 1.1e-22 109.8 83 69.9
MELO3C008132.2 Cucumis melo HOM05D004752 ORTHO05D005523 1.1e-22 109.8 73 72.6
PSO170G1458 Papaver somniferum HOM05D004752 ORTHO05D005523 1.1e-22 109.8 75 73.3
Sc01g0001860 Simmondsia chinensis HOM05D004752 ORTHO05D005523 1.1e-22 109.8 76 69.7
ECA247G0381 Erigeron canadensis HOM05D004752 ORTHO05D005523 1.8e-22 109.0 72 77.8
TAR628G0740 Trochodendron aralioides HOM05D004752 ORTHO05D005523 1.8e-22 109.0 74 74.3
Aqoxy5G02666 Aquilegia oxysepala HOM05D004752 ORTHO05D005523 3.1e-22 108.2 74 74.3
CsaV3_2G033590 Cucumis sativus L. HOM05D004752 ORTHO05D005523 3.1e-22 108.2 73 71.2
Phvul.007G240400 Phaseolus vulgaris HOM05D004752 ORTHO05D005523 3.1e-22 108.2 74 75.7
Rhsim06G0089000 Rhododendron simsii HOM05D004752 ORTHO05D005523 3.1e-22 108.2 77 66.2
Rhsim11G0057800 Rhododendron simsii HOM05D004752 ORTHO05D005523 3.1e-22 108.2 77 66.2
Cc00_g06570 Coffea canephora HOM05D004752 ORTHO05D005523 4.1e-22 107.8 74 71.6
HanXRQChr04g0109661 Helianthus annuus HOM05D004752 ORTHO05D005523 4.1e-22 107.8 83 67.5
Lj4E474T0 Lonicera japonica HOM05D004752 ORTHO05D005523 4.1e-22 107.8 72 73.6
PGSC0003DMG400009277 Solanum tuberosum HOM05D004752 ORTHO05D005523 5.3e-22 107.5 74 73.0
Nitab4.5_0003010g0020 Nicotiana tabacum HOM05D004752 ORTHO05D005523 9.1e-22 106.7 74 71.6
Rhsim11G0056800 Rhododendron simsii HOM05D004752 ORTHO05D005523 9.1e-22 106.7 85 61.2
Sed0006132 Sechium edule HOM05D004752 ORTHO05D005523 1.2e-21 106.3 73 68.5
CiPaw.05G229600 Carya illinoinensis HOM05D004752 ORTHO05D005523 1.6e-21 105.9 72 75.0
CiPaw.06G024200 Carya illinoinensis HOM05D004752 ORTHO05D005523 1.6e-21 105.9 74 71.6
Peaxi162Scf00391g00436 Petunia axillaris HOM05D004752 ORTHO05D005523 1.6e-21 105.9 74 70.3
TWI59G0745 Tripterygium wilfordii HOM05D004752 ORTHO05D005523 1.6e-21 105.9 75 72.0
Actinidia03509 Actinidia chinensis HOM05D004752 ORTHO05D005523 2.0e-21 105.5 87 63.2
Prupe.1G506700 Prunus persica HOM05D004752 ORTHO05D005523 2.0e-21 105.5 73 72.6
AT1G72020 Arabidopsis thaliana HOM05D004752 ORTHO05D005523 3.5e-21 104.8 77 68.8
RcHm_v2.0_Chr7g0240801 Rosa chinensis HOM05D004752 ORTHO05D005523 4.5e-21 104.4 73 71.2
FvH4_5g38800 Fragaria vesca HOM05D004752 ORTHO05D005523 5.9e-21 104.0 73 71.2
FAN18G0635 Fragaria x ananassa HOM05D004752 ORTHO05D005523 5.9e-21 104.0 73 71.2
TWI14G1278 Tripterygium wilfordii HOM05D004752 ORTHO05D005523 5.9e-21 104.0 75 69.3
AL2G31650 Arabidopsis lyrata HOM05D004752 ORTHO05D005523 7.7e-21 103.6 77 68.8
Migut.C01286 Erythranthe guttata HOM05D004752 ORTHO05D005523 7.7e-21 103.6 73 71.2
FAN04G0063 Fragaria x ananassa HOM05D004752 ORTHO05D005523 1.0e-20 103.2 73 71.2
arahy.Tifrunner.gnm1.ann1.0CG85F Arachis hypogaea HOM05D004752 ORTHO05D005523 1.7e-20 102.4 73 74.0
arahy.Tifrunner.gnm1.ann1.S21HCY Arachis hypogaea HOM05D004752 ORTHO05D005523 1.7e-20 102.4 73 74.0
DCAR_011527 Daucus carota HOM05D004752 ORTHO05D005523 1.7e-20 102.4 74 67.6
Ca_21523_v3 Cicer arietinum L. HOM05D004752 ORTHO05D005523 2.2e-20 102.1 74 70.3
FAN02G3062 Fragaria x ananassa HOM05D004752 ORTHO05D005523 2.2e-20 102.1 73 69.9
FAN08G2110 Fragaria x ananassa HOM05D004752 ORTHO05D005523 2.2e-20 102.1 73 69.9
FAN13G0652 Fragaria x ananassa HOM05D004752 ORTHO05D005523 2.2e-20 102.1 73 69.9
Manes.02G194400 Manihot esculenta HOM05D004752 ORTHO05D005523 2.2e-20 102.1 74 70.3
Zm00001eb082670 Zea mays HOM05D004752 ORTHO05D005523 2.2e-20 102.1 71 73.2
MSTRG.25459 Avicennia marina HOM05D004752 ORTHO05D005523 5.0e-20 100.9 72 68.1
Os04g0432600 Oryza sativa ssp. japonica HOM05D004752 ORTHO05D005523 8.5e-20 100.1 73 69.9
CDE04G0573 Ceratophyllum demersum HOM05D004752 ORTHO05D005523 1.5e-19 99.4 76 64.5
CDE07G1886 Ceratophyllum demersum HOM05D004752 ORTHO05D005523 1.5e-19 99.4 76 64.5
Lsat_1_v5_gn_1_12481 Lactuca sativa HOM05D004752 ORTHO05D005523 1.5e-19 99.4 68 69.1
FAN18G0607 Fragaria x ananassa HOM05D004752 ORTHO05D005523 1.9e-19 99.0 73 68.5
FAN18G1874 Fragaria x ananassa HOM05D004752 ORTHO05D005523 1.9e-19 99.0 73 68.5
FAN18G2073 Fragaria x ananassa HOM05D004752 ORTHO05D005523 1.9e-19 99.0 73 68.5
HPP92_000079 Vanilla planifolia HOM05D004752 ORTHO05D005523 3.2e-19 98.2 62 77.4
Duzib177G0197 Durio zibethinus HOM05D004752 ORTHO05D005523 5.5e-19 97.4 70 67.1
Zm00001eb243470 Zea mays HOM05D004752 ORTHO05D005523 3.6e-18 94.7 73 65.8
Gohir.A09G115700 Gossypium hirsutum HOM05D004752 ORTHO05D005523 8.0e-18 93.6 60 75.0
unitig_747.g21474 Utricularia gibba HOM05D004752 ORTHO05D005523 3.0e-17 91.7 59 76.3
MD00G1104100 Malus domestica HOM05D004752 ORTHO05D005523 4.0e-17 91.3 73 63.0
MD15G1358900 Malus domestica HOM05D004752 ORTHO05D005523 3.7e-15 84.7 73 58.9
GSVIVG01012767001 Vitis vinifera HOM05D004752 ORTHO05D005523 3.7e-15 84.7 83 53.0
SHI09031 Sapria himalayana HOM05D004752 ORTHO05D005523 4.8e-15 84.3 63 63.5
CBR_g3658 Chara braunii HOM05D004752 ORTHO05D005523 1.6e-10 69.3 72 48.6
AagrBONN_evm.TU.Sc2ySwM_117.1418 Anthoceros agrestis HOM05D004752 ORTHO05D005523 1.8e-09 65.9 68 45.6
Mapoly0001s0236 Marchantia polymorpha HOM05D004752 ORTHO05D005523 3.4e-08 61.6 75 44.0
Pp3c19_1780 Physcomitrium patens HOM05D004752 ORTHO05D005523 3.1e-06 55.1 68 38.2


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