Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0069G031 Amborella trichopoda HOM05D000166 ORTHO05D065895 1.3e-99 366.3 176 100.0
MBI11_g07401_MAGBIO Magnolia biondii HOM05D000166 ORTHO05D009859 3.3e-26 122.5 167 38.3
Aqoxy2G03915 Aquilegia oxysepala HOM05D000166 ORTHO05D009859 1.7e-22 110.2 166 35.5
Duzib128G2056 Durio zibethinus HOM05D000166 ORTHO05D009859 6.4e-22 108.2 167 32.9
Peaxi162Scf00215g00011 Petunia axillaris HOM05D000166 ORTHO05D009859 1.9e-21 106.7 176 31.8
TAR365G0435 Trochodendron aralioides HOM05D000166 ORTHO05D009859 4.6e-20 102.1 170 31.8
Thecc.05G260000 Theobroma cacao HOM05D000166 ORTHO05D009859 1.0e-19 100.9 166 31.9
PGSC0003DMG400010691 Solanum tuberosum HOM05D000166 ORTHO05D009859 4.3e-18 95.5 170 30.6
Cc09_g03210 Coffea canephora HOM05D000166 ORTHO05D009859 7.3e-18 94.7 168 32.7
PGR031G0121 Punica granatum HOM05D000166 ORTHO05D009859 7.3e-18 94.7 178 30.3
Manes.08G147300 Manihot esculenta HOM05D000427 ORTHO05D009859 1.3e-17 94.0 165 32.7
PSO017G6301 Papaver somniferum HOM05D000166 ORTHO05D009859 1.3e-17 94.0 170 30.0
TAR636G3540 Trochodendron aralioides HOM05D000929 ORTHO05D004813 1.6e-17 93.6 170 32.4
Duzib128G2036 Durio zibethinus HOM05D000031 ORTHO05D009859 4.8e-17 92.0 170 31.2
Nitab4.5_0000344g0050 Nicotiana tabacum HOM05D000031 ORTHO05D009859 4.8e-17 92.0 173 29.5
CAN.G961.1 Capsicum annuum HOM05D000166 ORTHO05D009859 8.1e-17 91.3 173 29.5
Prupe.6G356000 Prunus persica HOM05D000166 ORTHO05D009859 2.4e-16 89.7 173 30.6
DCAR_023861 Daucus carota HOM05D000166 ORTHO05D009859 3.1e-16 89.4 171 28.7
Potri.013G053001 Populus trichocarpa HOM05D000166 ORTHO05D009859 3.1e-16 89.4 167 29.9
Potri.019G030600 Populus trichocarpa HOM05D000166 ORTHO05D009859 4.0e-16 89.0 173 28.3
PSO675G0617 Papaver somniferum HOM05D000166 ORTHO05D009859 5.3e-16 88.6 170 28.8
Migut.F01821 Erythranthe guttata HOM05D000166 ORTHO05D009859 1.5e-15 87.0 169 29.6
Atru.chr2.1253 Acer truncatum HOM05D000427 ORTHO05D009859 2.0e-15 86.7 168 32.1
Dinv16814 Davidia involucrata HOM05D000031 ORTHO05D009859 7.6e-15 84.7 173 30.1
CANSAT54G2675 Cannabis sativa HOM05D000427 ORTHO05D009859 1.2e-12 77.4 173 30.1
FAN02G0998 Fragaria x ananassa HOM05D000143 ORTHO05D009859 1.2e-12 77.4 166 30.1
FAN09G2348 Fragaria x ananassa HOM05D000143 ORTHO05D009859 1.2e-12 77.4 166 29.5
TWI34G1547 Tripterygium wilfordii HOM05D000166 ORTHO05D009859 1.6e-12 77.0 167 26.9
FAN14G3043 Fragaria x ananassa HOM05D000143 ORTHO05D009859 6.0e-12 75.1 167 29.9
Lsat_1_v5_gn_2_17201 Lactuca sativa HOM05D000166 ORTHO05D009859 6.0e-12 75.1 179 32.4
TWI60G1336 Tripterygium wilfordii HOM05D000166 ORTHO05D009859 3.0e-11 72.8 169 27.2
Medtr7g116650 Medicago truncatula HOM05D000031 ORTHO05D009859 1.1e-10 70.9 167 26.3
MBI15_g31114_MAGBIO Magnolia biondii HOM05D000041 ORTHO05D008213 1.5e-10 70.5 158 26.6
FAN05G0351 Fragaria x ananassa HOM05D000143 ORTHO05D000072 1.9e-10 70.1 167 29.3
FAN05G0972 Fragaria x ananassa HOM05D000143 ORTHO05D000072 1.9e-10 70.1 167 29.3
Psat3g005040 Pisum sativum HOM05D000031 ORTHO05D009859 3.3e-10 69.3 171 26.9
DCAR_011214 Daucus carota HOM05D000041 ORTHO05D008213 1.6e-09 67.0 160 25.6
Glyma.19G251100 Glycine max HOM05D000427 ORTHO05D009859 2.1e-09 66.6 168 28.6
MBI15_g07762_MAGBIO Magnolia biondii HOM05D000041 ORTHO05D013998 3.1e-08 62.8 157 24.2
CANSAT01G1335 Cannabis sativa HOM05D000427 ORTHO05D008213 9.0e-08 61.2 163 27.0
QL02p093070 Quercus lobata HOM05D000085 ORTHO05D013998 1.3e-06 57.4 155 23.9
Cc11_g14580 Coffea canephora HOM05D000041 ORTHO05D008213 2.2e-06 56.6 159 23.3
SEGI_37056 Sequoiadendron giganteum HOM05D039894 ORTHO05D386205 2.2e-06 56.6 171 28.1
Peaxi162Scf00338g00013 Petunia axillaris HOM05D000041 ORTHO05D008213 3.8e-06 55.8 156 25.0
COL.COLO4_04780 Corchorus olitorius HOM05D000041 ORTHO05D008213 4.9e-06 55.5 157 26.1


User provided reference genes

Program Settings