Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0068G095 Amborella trichopoda HOM05D002217 ORTHO05D002093 1.6e-140 502.7 248 100.0
ATR0697G141 Amborella trichopoda HOM05D002217 ORTHO05D002093 4.6e-50 202.2 114 82.5
ATR0618G426 Amborella trichopoda HOM05D002217 ORTHO05D002093 1.3e-49 200.7 115 81.7
TWI53G0857 Tripterygium wilfordii HOM05D002217 ORTHO05D002093 3.4e-13 79.7 125 38.4
TAR369G0487 Trochodendron aralioides HOM05D002217 ORTHO05D002093 1.7e-12 77.4 119 37.0
Nn2g11328 Nelumbo nucifera HOM05D002217 ORTHO05D002093 5.0e-12 75.9 119 33.6
Nn2g13567 Nelumbo nucifera HOM05D002217 ORTHO05D002093 8.5e-12 75.1 117 35.9
TAR636G2643 Trochodendron aralioides HOM05D002217 ORTHO05D002093 1.4e-11 74.3 119 35.3
TAR636G3023 Trochodendron aralioides HOM05D002217 ORTHO05D002093 1.4e-11 74.3 119 35.3
TAR623G0288 Trochodendron aralioides HOM05D002217 ORTHO05D002093 1.9e-11 73.9 116 35.3
Eucgr.K03005 Eucalyptus grandis HOM05D002217 ORTHO05D002093 4.2e-11 72.8 121 36.4
MD01G1145100 Malus domestica HOM05D002217 ORTHO05D002093 4.2e-11 72.8 112 37.5
MBI14_g28604_MAGBIO Magnolia biondii HOM05D002217 ORTHO05D002093 5.5e-11 72.4 120 35.8
Atru.chr12.283 Acer truncatum HOM05D002217 ORTHO05D002093 1.2e-10 71.2 120 36.7
Atru.chr12.322 Acer truncatum HOM05D002217 ORTHO05D002093 1.2e-10 71.2 120 36.7
CDE07G1880 Ceratophyllum demersum HOM05D000595 ORTHO05D006275 1.2e-10 71.2 90 36.7
Sed0000780 Sechium edule HOM05D002217 ORTHO05D002093 1.2e-10 71.2 127 34.6
SEGI_40537 Sequoiadendron giganteum HOM05D000026 ORTHO05D002093 1.6e-10 70.9 125 33.6
PSO384G3728 Papaver somniferum HOM05D002217 ORTHO05D002093 2.7e-10 70.1 120 35.8
Prupe.2G244400 Prunus persica HOM05D002217 ORTHO05D002093 2.7e-10 70.1 112 36.6
TPR.G34871 Trifolium pratense HOM05D002217 ORTHO05D002093 2.7e-10 70.1 126 31.7
PSO339G2004 Papaver somniferum HOM05D002217 ORTHO05D002093 4.7e-10 69.3 120 35.0
TWI74G0857 Tripterygium wilfordii HOM05D002217 ORTHO05D002093 4.7e-10 69.3 131 30.5
Manes.09G100300 Manihot esculenta HOM05D002217 ORTHO05D002093 6.1e-10 68.9 121 33.9
PGR004G1183 Punica granatum HOM05D002217 ORTHO05D002093 6.1e-10 68.9 113 36.3
Actinidia13798 Actinidia chinensis HOM05D002217 ORTHO05D002093 7.9e-10 68.6 108 34.3
Actinidia29665 Actinidia chinensis HOM05D002217 ORTHO05D002093 7.9e-10 68.6 114 36.8
Dinv35524 Davidia involucrata HOM05D002217 ORTHO05D002093 7.9e-10 68.6 114 34.2
Actinidia29148 Actinidia chinensis HOM05D002217 ORTHO05D002093 1.0e-09 68.2 119 33.6
Aqoxy1G00761 Aquilegia oxysepala HOM05D002217 ORTHO05D002093 1.0e-09 68.2 115 33.9
Potri.016G107200 Populus trichocarpa HOM05D002217 ORTHO05D002093 1.0e-09 68.2 116 32.8
Glyma.01G109200 Glycine max HOM05D002217 ORTHO05D002093 2.3e-09 67.0 125 32.0
Oeu018345.1 Olea europaea HOM05D002217 ORTHO05D002093 2.3e-09 67.0 100 37.0
Oeu018346.1 Olea europaea HOM05D002217 ORTHO05D002093 2.3e-09 67.0 100 37.0
Sabra10G0149700 Salix brachista HOM05D002217 ORTHO05D002093 2.3e-09 67.0 117 35.9
FAN05G0969 Fragaria x ananassa HOM05D002217 ORTHO05D002093 3.0e-09 66.6 116 30.2
MD07G1211800 Malus domestica HOM05D002217 ORTHO05D002093 3.0e-09 66.6 112 35.7
QL07p027523 Quercus lobata HOM05D002217 ORTHO05D002093 3.0e-09 66.6 123 30.9
CiPaw.09G204300 Carya illinoinensis HOM05D002217 ORTHO05D002093 5.1e-09 65.9 122 30.3
Ciclev10031876m.g Citrus clementina HOM05D002217 ORTHO05D002093 5.1e-09 65.9 122 33.6
SEGI_14414 Sequoiadendron giganteum HOM05D000182 ORTHO05D000112 5.1e-09 65.9 108 35.2
Dinv37094 Davidia involucrata HOM05D002217 ORTHO05D002093 6.7e-09 65.5 121 33.9
CiPaw.02G188900 Carya illinoinensis HOM05D002217 ORTHO05D002093 8.8e-09 65.1 125 34.4
AUR62022818 Chenopodium quinoa HOM05D002217 ORTHO05D002093 8.8e-09 65.1 159 32.7
Manes.08G083800 Manihot esculenta HOM05D002217 ORTHO05D002093 8.8e-09 65.1 121 33.1
Sabra16G0105900 Salix brachista HOM05D002217 ORTHO05D002093 8.8e-09 65.1 123 30.9
Haze_20926 Corylus avellana HOM05D002217 ORTHO05D002093 1.1e-08 64.7 123 30.9
Ah.11g045230 Amaranthus hybridus HOM05D002217 ORTHO05D002093 1.5e-08 64.3 111 30.6
DCAR_010397 Daucus carota HOM05D002217 ORTHO05D002093 1.5e-08 64.3 116 32.8
Rhsim09G0171000 Rhododendron simsii HOM05D002217 ORTHO05D002093 1.5e-08 64.3 121 31.4
FvH4_6g12300 Fragaria vesca HOM05D002217 ORTHO05D002093 2.0e-08 63.9 116 29.3
Lsat_1_v5_gn_8_82300 Lactuca sativa HOM05D002217 ORTHO05D002093 2.0e-08 63.9 102 32.4
Oeu009905.1 Olea europaea HOM05D002217 ORTHO05D002093 2.0e-08 63.9 89 36.0
Cfa017276 Carpinus fangiana HOM05D002217 ORTHO05D002093 2.6e-08 63.5 123 30.1
CsaV3_4G025910 Cucumis sativus L. HOM05D002217 ORTHO05D002093 2.6e-08 63.5 114 31.6
Medtr7g066210 Medicago truncatula HOM05D002217 ORTHO05D002093 2.6e-08 63.5 118 30.5
TWI53G1286 Tripterygium wilfordii HOM05D002217 ORTHO05D002093 2.6e-08 63.5 131 28.2
MELO3C003217.2 Cucumis melo HOM05D002217 ORTHO05D002093 3.3e-08 63.2 125 32.0
Lalb_Chr01g0022861 Lupinus albus HOM05D002217 ORTHO05D002093 3.3e-08 63.2 127 30.7
Phvul.010G006300 Phaseolus vulgaris HOM05D002217 ORTHO05D002093 3.3e-08 63.2 116 29.3
Potri.006G094900 Populus trichocarpa HOM05D002217 ORTHO05D002093 3.3e-08 63.2 121 32.2
Rhsim05G0202700 Rhododendron simsii HOM05D002217 ORTHO05D002093 3.3e-08 63.2 112 33.9
VMungo0331G1414 Vigna mungo HOM05D002217 ORTHO05D002093 3.3e-08 63.2 131 29.8
EL10Ac3g06259 Beta vulgaris HOM05D002217 ORTHO05D002093 4.4e-08 62.8 111 32.4
Sabra06G0072700 Salix brachista HOM05D002217 ORTHO05D002093 4.4e-08 62.8 111 29.7
CSS0044501 Camellia sinensis var. sinensis HOM05D002217 ORTHO05D002093 5.7e-08 62.4 128 31.2
AUR62012182 Chenopodium quinoa HOM05D002217 ORTHO05D002093 5.7e-08 62.4 108 33.3
SEGI_39965 Sequoiadendron giganteum HOM05D000182 ORTHO05D000112 5.7e-08 62.4 96 35.4
Sc10g0002080 Simmondsia chinensis HOM05D002217 ORTHO05D002093 5.7e-08 62.4 109 32.1
CAN.G1706.1 Capsicum annuum HOM05D002217 ORTHO05D002093 7.4e-08 62.0 125 33.6
FAN05G2512 Fragaria x ananassa HOM05D002217 ORTHO05D002093 7.4e-08 62.0 116 28.4
FAN09G2860 Fragaria x ananassa HOM05D002217 ORTHO05D002093 7.4e-08 62.0 116 28.4
Hma1.2p1_0671F.1_g200790 Hydrangea macrophylla HOM05D002217 ORTHO05D002093 7.4e-08 62.0 124 32.3
Oeu038990.1 Olea europaea HOM05D002217 ORTHO05D002093 7.4e-08 62.0 117 32.5
SEGI_12940 Sequoiadendron giganteum HOM05D002217 ORTHO05D002093 7.4e-08 62.0 124 33.1
Cpa.g.sc19.237 Carica papaya HOM05D002217 ORTHO05D002093 9.7e-08 61.6 121 32.2
AUR62025788 Chenopodium quinoa HOM05D002217 ORTHO05D002093 9.7e-08 61.6 110 30.9
Ca_07597_v3 Cicer arietinum L. HOM05D002217 ORTHO05D002093 9.7e-08 61.6 121 30.6
FAN02G2496 Fragaria x ananassa HOM05D002217 ORTHO05D002093 9.7e-08 61.6 116 29.3
HanXRQChr06g0176611 Helianthus annuus HOM05D002217 ORTHO05D002093 9.7e-08 61.6 108 31.5
SEGI_15598 Sequoiadendron giganteum HOM05D000182 ORTHO05D000112 9.7e-08 61.6 96 35.4
VMungo1383G2537 Vigna mungo HOM05D002217 ORTHO05D002093 9.7e-08 61.6 113 31.0
ClCG04G007340 Citrullus lanatus HOM05D002217 ORTHO05D002093 1.3e-07 61.2 125 32.8
Cc02_g07070 Coffea canephora HOM05D002217 ORTHO05D002093 1.3e-07 61.2 117 31.6
Duzib106G0053 Durio zibethinus HOM05D002217 ORTHO05D002093 1.3e-07 61.2 153 29.4
EL10Ac2g04764 Beta vulgaris HOM05D002217 ORTHO05D002093 1.7e-07 60.8 108 34.3
CSS0022028 Camellia sinensis var. sinensis HOM05D002217 ORTHO05D002093 1.7e-07 60.8 111 29.7
FAN14G0958 Fragaria x ananassa HOM05D002217 ORTHO05D002093 1.7e-07 60.8 116 28.4
Glyma.03G074300 Glycine max HOM05D002217 ORTHO05D002093 1.7e-07 60.8 126 31.7
Lalb_Chr03g0042851 Lupinus albus HOM05D002217 ORTHO05D002093 1.7e-07 60.8 131 29.8
RcHm_v2.0_Chr3g0464131 Rosa chinensis HOM05D002217 ORTHO05D002093 1.7e-07 60.8 116 29.3
Ciclev10012045m.g Citrus clementina HOM05D002217 ORTHO05D002093 2.2e-07 60.5 127 33.9
Eucgr.G03015 Eucalyptus grandis HOM05D002217 ORTHO05D002093 2.8e-07 60.1 118 31.4
Lj1g0017886 Lotus japonicus HOM05D002217 ORTHO05D002093 2.8e-07 60.1 124 30.6
Sed0017740 Sechium edule HOM05D002217 ORTHO05D002093 2.8e-07 60.1 128 33.6
CSS0034611 Camellia sinensis var. sinensis HOM05D002217 ORTHO05D002093 3.7e-07 59.7 123 33.3
Phvul.008G111500 Phaseolus vulgaris HOM05D002217 ORTHO05D002093 3.7e-07 59.7 116 29.3
SGA_v2.0_scaffold85G26787 Striga asiatica HOM05D002217 ORTHO05D002093 3.7e-07 59.7 110 34.5
Peaxi162Scf00427g00065 Petunia axillaris HOM05D002217 ORTHO05D002093 4.8e-07 59.3 96 32.3
Sc11g0007550 Simmondsia chinensis HOM05D002217 ORTHO05D002093 6.3e-07 58.9 108 31.5
Migut.J00241 Erythranthe guttata HOM05D002217 ORTHO05D002093 8.2e-07 58.5 128 32.0
Lalb_Chr19g0124871 Lupinus albus HOM05D002217 ORTHO05D002093 8.2e-07 58.5 122 28.7
Solyc09g011840.1 Solanum lycopersicum HOM05D002217 ORTHO05D002093 8.2e-07 58.5 126 33.3
Sopen09g006660 Solanum pennellii HOM05D002217 ORTHO05D002093 8.2e-07 58.5 126 33.3
PGSC0003DMG400020368 Solanum tuberosum HOM05D002217 ORTHO05D002093 8.2e-07 58.5 126 33.3
MSTRG.5608 Avicennia marina HOM05D002217 ORTHO05D002093 1.1e-06 58.2 89 36.0
ECA236G2507 Erigeron canadensis HOM05D002217 ORTHO05D002093 1.1e-06 58.2 100 29.0
HanXRQChr04g0124691 Helianthus annuus HOM05D002217 ORTHO05D002093 1.1e-06 58.2 104 30.8
Sc22g0004530 Simmondsia chinensis HOM05D002217 ORTHO05D002093 1.1e-06 58.2 90 35.6
MSTRG.19039 Avicennia marina HOM05D002217 ORTHO05D002093 1.8e-06 57.4 98 33.7
CANSAT35G1571 Cannabis sativa HOM05D002217 ORTHO05D002093 1.8e-06 57.4 111 27.9
COL.COLO4_14638 Corchorus olitorius HOM05D002217 ORTHO05D002093 1.8e-06 57.4 112 33.0
CsaV3_6G001570 Cucumis sativus L. HOM05D002217 ORTHO05D002093 1.8e-06 57.4 118 33.1
Lj3g0008091 Lotus japonicus HOM05D002217 ORTHO05D002093 1.8e-06 57.4 118 30.5
RcHm_v2.0_Chr1g0369101 Rosa chinensis HOM05D002217 ORTHO05D002093 1.8e-06 57.4 119 32.8
Ah.10g036740 Amaranthus hybridus HOM05D002217 ORTHO05D002093 3.1e-06 56.6 108 29.6
Duzib128G0949 Durio zibethinus HOM05D002217 ORTHO05D002093 4.1e-06 56.2 125 30.4
Prupe.6G268200 Prunus persica HOM05D002217 ORTHO05D002093 4.1e-06 56.2 123 30.1
PGR142G3915 Punica granatum HOM05D002217 ORTHO05D002093 5.3e-06 55.8 121 34.7
GSVIVG01034031001 Vitis vinifera HOM05D002217 ORTHO05D002093 5.3e-06 55.8 87 33.3
BcaB01g06085 Brassica carinata HOM05D002217 ORTHO05D002093 7.0e-06 55.5 86 32.6
MELO3C008269.2 Cucumis melo HOM05D002217 ORTHO05D002093 7.0e-06 55.5 118 32.2
FAN10G0197 Fragaria x ananassa HOM05D002217 ORTHO05D002093 7.0e-06 55.5 124 33.9
Nitab4.5_0000008g0410 Nicotiana tabacum HOM05D002217 ORTHO05D002093 7.0e-06 55.5 133 30.1
vmacro10077 Vaccinium macrocarpon HOM05D002217 ORTHO05D002093 7.0e-06 55.5 120 29.2
AUR62042940 Chenopodium quinoa HOM05D002217 ORTHO05D002093 9.1e-06 55.1 111 29.7
Thecc.05G024700 Theobroma cacao HOM05D002217 ORTHO05D002093 9.1e-06 55.1 118 30.5


User provided reference genes

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