Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0068G091 Amborella trichopoda HOM05D003201 ORTHO05D008805 5.0e-145 517.7 249 100.0
TAR623G0449 Trochodendron aralioides HOM05D003201 ORTHO05D008805 1.8e-86 323.2 263 62.0
Aqoxy5G03624 Aquilegia oxysepala HOM05D003201 ORTHO05D008805 4.0e-86 322.0 266 61.3
MBI13_g39202_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 1.3e-84 317.0 269 60.6
PSO339G6265 Papaver somniferum HOM05D003201 ORTHO05D008805 2.4e-83 312.8 271 57.2
CANSAT35G1729 Cannabis sativa HOM05D003201 ORTHO05D008805 2.3e-81 306.2 240 63.3
PSO384G0221 Papaver somniferum HOM05D003201 ORTHO05D008805 8.6e-81 304.3 264 56.1
ClCG01G015060 Citrullus lanatus HOM05D003201 ORTHO05D008805 1.9e-80 303.1 248 60.1
Gohir.A09G117900 Gossypium hirsutum HOM05D003201 ORTHO05D008805 5.6e-80 301.6 261 57.9
Lj2g0011105 Lotus japonicus HOM05D003201 ORTHO05D008805 5.6e-80 301.6 260 60.0
Gohir.D09G114700 Gossypium hirsutum HOM05D003201 ORTHO05D008805 1.2e-79 300.4 262 58.0
Cfa002302 Carpinus fangiana HOM05D003201 ORTHO05D008805 3.6e-79 298.9 255 58.8
QL04p043008 Quercus lobata HOM05D003201 ORTHO05D008805 6.2e-79 298.1 259 57.9
FvH4_3g46100 Fragaria vesca HOM05D003201 ORTHO05D008805 8.1e-79 297.7 270 58.9
Thecc.05G124600 Theobroma cacao HOM05D003201 ORTHO05D008805 8.1e-79 297.7 263 59.3
Potri.013G161600 Populus trichocarpa HOM05D003201 ORTHO05D008805 3.1e-78 295.8 264 55.7
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 4.0e-78 295.4 252 59.9
Sabra13G0129200 Salix brachista HOM05D003201 ORTHO05D008805 5.2e-78 295.0 265 56.2
Psat1g112800 Pisum sativum HOM05D003201 ORTHO05D008805 6.8e-78 294.7 262 56.9
TPR.G5800 Trifolium pratense HOM05D003201 ORTHO05D008805 6.8e-78 294.7 263 57.0
Dinv15525 Davidia involucrata HOM05D003201 ORTHO05D008805 1.2e-77 293.9 263 55.9
CSS0031904 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008805 2.0e-77 293.1 262 57.3
SEGI_31075 Sequoiadendron giganteum HOM05D003201 ORTHO05D008805 2.0e-77 293.1 283 54.8
HanXRQChr17g0555621 Helianthus annuus HOM05D003201 ORTHO05D008805 4.4e-77 292.0 253 55.7
RcHm_v2.0_Chr5g0084171 Rosa chinensis HOM05D003201 ORTHO05D008805 4.4e-77 292.0 270 57.8
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 5.8e-77 291.6 250 60.0
ECA248G3933 Erigeron canadensis HOM05D003201 ORTHO05D008805 5.8e-77 291.6 253 55.7
Medtr6g059320 Medicago truncatula HOM05D003201 ORTHO05D008805 5.8e-77 291.6 263 57.0
MELO3C024592.2 Cucumis melo HOM05D003201 ORTHO05D008805 2.2e-76 289.7 250 58.0
GSVIVG01034815001 Vitis vinifera HOM05D003201 ORTHO05D008805 2.9e-76 289.3 261 57.9
AL7G33540 Arabidopsis lyrata HOM05D003201 ORTHO05D008805 6.4e-76 288.1 252 57.5
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 1.9e-75 286.6 250 58.8
Glyma.16G207100 Glycine max HOM05D003201 ORTHO05D008805 1.9e-75 286.6 266 55.6
Actinidia16221 Actinidia chinensis HOM05D003201 ORTHO05D008805 3.2e-75 285.8 258 57.0
Lalb_Chr01g0008671 Lupinus albus HOM05D003201 ORTHO05D008805 5.4e-75 285.0 260 57.7
CsaV3_6G041170 Cucumis sativus L. HOM05D003201 ORTHO05D008805 9.2e-75 284.3 250 56.8
Glyma.09G156400 Glycine max HOM05D003201 ORTHO05D008805 2.1e-74 283.1 266 54.5
DCAR_028397 Daucus carota HOM05D003201 ORTHO05D008805 4.6e-74 282.0 265 55.8
VMungo0464G1483 Vigna mungo HOM05D003201 ORTHO05D008805 4.6e-74 282.0 263 55.5
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 6.0e-74 281.6 258 56.6
Prupe.6G000300 Prunus persica HOM05D003201 ORTHO05D008805 6.0e-74 281.6 264 54.9
CDE02G2127 Ceratophyllum demersum HOM05D003201 ORTHO05D008805 7.8e-74 281.2 278 54.0
TWI34G1882 Tripterygium wilfordii HOM05D003201 ORTHO05D008805 7.8e-74 281.2 265 57.0
Phvul.004G131600 Phaseolus vulgaris HOM05D003201 ORTHO05D008805 1.0e-73 280.8 262 55.3
THA.LOC104806236 Tarenaya hassleriana HOM05D003201 ORTHO05D008805 1.3e-73 280.4 260 56.9
CARHR227170 Cardamine hirsuta HOM05D003201 ORTHO05D008805 2.3e-73 279.6 258 54.7
Sp7g18690 Schrenkiella parvula HOM05D003201 ORTHO05D008805 3.0e-73 279.3 252 56.3
Carub.0007s2082 Capsella rubella HOM05D003201 ORTHO05D008805 3.9e-73 278.9 249 56.6
Cc01_g05060 Coffea canephora HOM05D003201 ORTHO05D008805 3.9e-73 278.9 264 55.7
Hma1.2p1_1133F.1_g260360 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 5.1e-73 278.5 264 54.5
Hma1.2p1_1133F.1_g260370 Hydrangea macrophylla HOM05D003201 ORTHO05D008805 5.1e-73 278.5 264 54.5
Peaxi162Scf01181g00210 Petunia axillaris HOM05D003201 ORTHO05D008805 5.1e-73 278.5 270 54.4
Solyc01g057570.3 Solanum lycopersicum HOM05D003201 ORTHO05D008805 5.1e-73 278.5 263 54.4
Zm00001eb047810 Zea mays HOM05D003201 ORTHO05D008805 5.1e-73 278.5 272 52.6
Thhalv10026088m.g Eutrema salsugineum HOM05D003201 ORTHO05D008805 1.1e-72 277.3 256 55.9
Sopen01g022430 Solanum pennellii HOM05D003201 ORTHO05D008805 1.1e-72 277.3 263 54.4
CAN.G431.2 Capsicum annuum HOM05D003201 ORTHO05D008805 1.5e-72 276.9 270 54.1
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 1.2e-71 273.9 256 56.2
AUR62000916 Chenopodium quinoa HOM05D003201 ORTHO05D008805 2.8e-71 272.7 259 54.4
HPP92_021155 Vanilla planifolia HOM05D003201 ORTHO05D008805 2.8e-71 272.7 253 54.9
MSTRG.12815 Avicennia marina HOM05D003201 ORTHO05D008805 4.7e-71 271.9 265 54.0
Migut.N00525 Erythranthe guttata HOM05D003201 ORTHO05D008805 4.0e-70 268.9 264 56.1
vmacro04280 Vaccinium macrocarpon HOM05D003201 ORTHO05D008805 2.0e-69 266.5 277 52.0
MD11G1000200 Malus domestica HOM05D003201 ORTHO05D008805 3.4e-69 265.8 262 53.8
Pp3c2_18510 Physcomitrium patens HOM05D003201 ORTHO05D008805 2.9e-68 262.7 255 51.8
BcaC09g51346 Brassica carinata HOM05D003201 ORTHO05D008805 9.3e-67 257.7 206 61.2
Sopen01g019970 Solanum pennellii HOM05D003201 ORTHO05D008805 7.8e-66 254.6 263 52.1
EL10Ac4g09260 Beta vulgaris HOM05D003201 ORTHO05D008805 1.0e-65 254.2 294 47.6
unitig_0.g1143 Utricularia gibba HOM05D003201 ORTHO05D008805 1.0e-65 254.2 241 54.8
CiPaw.03G255400 Carya illinoinensis HOM05D003201 ORTHO05D008805 1.7e-65 253.4 223 59.2
arahy.Tifrunner.gnm1.ann1.75P5EB Arachis hypogaea HOM05D003201 ORTHO05D008805 2.3e-65 253.1 235 57.9
SGA_v2.0_scaffold6G03334 Striga asiatica HOM05D003201 ORTHO05D008805 3.9e-65 252.3 274 50.4
Sed0008662 Sechium edule HOM05D003201 ORTHO05D008805 8.7e-65 251.1 252 52.4
Lsat_1_v5_gn_1_71340 Lactuca sativa HOM05D003201 ORTHO05D008805 1.5e-64 250.4 203 57.6
PGR119G1272 Punica granatum HOM05D003201 ORTHO05D008805 7.3e-64 248.1 263 53.2
Eucgr.J01718 Eucalyptus grandis HOM05D003201 ORTHO05D008805 3.6e-63 245.7 231 56.3
Gorai.006G132500 Gossypium raimondii HOM05D003201 ORTHO05D008805 4.8e-63 245.4 188 63.3
Sc18g0002730 Simmondsia chinensis HOM05D003201 ORTHO05D008805 1.1e-62 244.2 207 58.0
Atru.chr2.209 Acer truncatum HOM05D003201 ORTHO05D008805 3.1e-62 242.7 183 63.9
arahy.Tifrunner.gnm1.ann1.F1EX5J Arachis hypogaea HOM05D003201 ORTHO05D008805 6.9e-62 241.5 236 55.5
Ciclev10029320m.g Citrus clementina HOM05D003201 ORTHO05D008805 9.0e-62 241.1 180 65.0
Mapoly0007s0017 Marchantia polymorpha HOM05D003201 ORTHO05D008805 5.8e-61 238.4 257 46.7
Os10g0420000 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008805 6.4e-60 235.0 264 47.7
SMO147G0005 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 6.4e-60 235.0 245 48.6
SMO132G0004 Selaginella moellendorffii HOM05D003201 ORTHO05D008805 9.3e-59 231.1 258 46.9
AT4G20350 Arabidopsis thaliana HOM05D003201 ORTHO05D008805 1.9e-51 206.8 200 55.5
AUR62004843 Chenopodium quinoa HOM05D003201 ORTHO05D008805 1.8e-49 200.3 139 66.2
FAN16G0934 Fragaria x ananassa HOM05D000104 ORTHO05D004363 1.5e-48 197.2 247 49.0
Haze_24508 Corylus avellana HOM05D003201 ORTHO05D008805 5.6e-48 195.3 195 55.9
AUR62005054 Chenopodium quinoa HOM05D003201 ORTHO05D008805 1.6e-47 193.7 201 51.7
FAN11G2508 Fragaria x ananassa HOM05D003201 ORTHO05D008805 4.8e-47 192.2 199 54.8
Nitab4.5_0000075g0050 Nicotiana tabacum HOM05D003201 ORTHO05D008805 3.4e-45 186.0 279 40.5
FAN25G0659 Fragaria x ananassa HOM05D003201 ORTHO05D008805 4.5e-45 185.7 191 54.5
MBI13_g36948_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 1.2e-42 177.6 178 53.4
Manes.18G121700 Manihot esculenta HOM05D003201 ORTHO05D008805 1.2e-42 177.6 192 50.5
Duzib093G2193 Durio zibethinus HOM05D003201 ORTHO05D008805 3.5e-42 176.0 262 40.8
Cpa.g.sc30.50 Carica papaya HOM05D003201 ORTHO05D008805 3.9e-41 172.6 189 52.4
Rhsim13G0235500 Rhododendron simsii HOM05D003201 ORTHO05D008805 6.9e-38 161.8 318 35.2
SalBow3G4219 Salvia bowleyana HOM05D003201 ORTHO05D008805 3.3e-32 142.9 135 54.8
MCO03G055 Micromonas commoda HOM05D003201 ORTHO05D008805 1.7e-31 140.6 249 36.9
CBR_g45550 Chara braunii HOM05D000019 ORTHO05D000353 6.3e-31 138.7 107 56.1
FAN21G2623 Fragaria x ananassa HOM05D003201 ORTHO05D008805 6.3e-31 138.7 162 50.6
Lj1A555G38 Lonicera japonica HOM05D003201 ORTHO05D008805 3.1e-30 136.3 158 48.7
Ca_25246_v3 Cicer arietinum L. HOM05D003201 ORTHO05D008805 1.2e-29 134.4 151 49.7
Hund07019 Selenicereus undatus HOM05D003201 ORTHO05D008805 2.0e-29 133.7 157 49.0
Nitab4.5_0005125g0010 Nicotiana tabacum HOM05D003201 ORTHO05D008805 9.4e-27 124.8 131 51.9
COL.COLO4_24749 Corchorus olitorius HOM05D003201 ORTHO05D008805 3.0e-25 119.8 262 32.8
PGSC0003DMG400026601 Solanum tuberosum HOM05D003201 ORTHO05D008805 1.3e-23 114.4 159 42.1
ATR0798G001 Amborella trichopoda HOM05D003201 ORTHO05D008805 1.8e-22 110.5 58 94.8
Cre14.g632791 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008805 5.9e-21 105.5 173 35.8
FAN11G4037 Fragaria x ananassa HOM05D003201 ORTHO05D008805 1.7e-20 104.0 64 71.9
FAN25G1903 Fragaria x ananassa HOM05D003201 ORTHO05D008805 1.2e-18 97.8 73 65.8
Cfa026017 Carpinus fangiana HOM05D003201 ORTHO05D124792 4.8e-15 85.9 188 31.4
MCO08G131 Micromonas commoda HOM05D003201 ORTHO05D008805 1.4e-14 84.3 195 33.3
PRCOL_00004726 Prasinoderma coloniale HOM05D003201 ORTHO05D008805 2.3e-09 67.0 98 36.7
Aa31LG2G14440 Aethionema arabicum HOM05D007105 ORTHO05D009304 4.4e-08 62.8 196 28.1
CBR_g45547 Chara braunii HOM05D003201 ORTHO05D008805 5.7e-08 62.4 268 26.5
Thhalv10006757m.g Eutrema salsugineum HOM05D007105 ORTHO05D004932 7.5e-08 62.0 195 28.2
arahy.Tifrunner.gnm1.ann1.68R93N Arachis hypogaea HOM05D006806 ORTHO05D008448 2.8e-07 60.1 182 27.5
arahy.Tifrunner.gnm1.ann1.IELT58 Arachis hypogaea HOM05D006806 ORTHO05D008448 4.8e-07 59.3 166 28.9
Carub.0001s2995 Capsella rubella HOM05D007105 ORTHO05D009304 4.8e-07 59.3 198 28.8
Sp1g27320 Schrenkiella parvula HOM05D007105 ORTHO05D009304 8.2e-07 58.5 195 27.7
Medtr5g026030 Medicago truncatula HOM05D007105 ORTHO05D009304 1.4e-06 57.8 197 26.9
MCO10G232 Micromonas commoda HOM05D006806 ORTHO05D008448 4.1e-06 56.2 159 28.3
AL1G49460 Arabidopsis lyrata HOM05D007105 ORTHO05D009304 9.1e-06 55.1 196 28.1


User provided reference genes

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