Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 0.0e+00 1230.3 641 100.0
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 4.8e-43 180.3 492 34.3
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 1.2e-41 175.6 681 30.5
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 2.0e-41 174.9 340 39.7
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 5.0e-40 170.2 649 33.4
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 2.5e-39 167.9 504 33.5
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 4.2e-39 167.2 496 34.1
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 1.6e-38 165.2 407 36.9
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 1.4e-37 162.2 352 40.3
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 1.8e-37 161.8 428 33.9
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 2.3e-37 161.4 459 34.2
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 2.3e-37 161.4 496 34.5
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 5.2e-37 160.2 312 40.4
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 1.5e-36 158.7 633 29.4
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 2.0e-36 158.3 401 34.4
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 2.0e-36 158.3 401 34.2
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 5.7e-36 156.8 459 36.4
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 7.5e-36 156.4 358 42.2
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 2.8e-35 154.5 468 35.0
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 2.8e-35 154.5 309 38.2
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 3.7e-35 154.1 394 41.6
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 4.9e-35 153.7 451 33.3
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 6.3e-35 153.3 512 35.7
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 6.3e-35 153.3 584 30.7
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 1.1e-34 152.5 504 31.5
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 1.1e-34 152.5 651 31.5
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 1.4e-34 152.1 524 32.6
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 1.8e-34 151.8 456 33.3
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 2.4e-34 151.4 359 35.1
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 7.0e-34 149.8 565 31.0
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 7.0e-34 149.8 219 43.8
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 7.0e-34 149.8 629 30.7
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 1.6e-33 148.7 392 38.8
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 1.6e-33 148.7 227 46.3
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 2.0e-33 148.3 603 33.8
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 2.7e-33 147.9 408 33.1
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 2.7e-33 147.9 325 36.6
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 3.5e-33 147.5 397 36.5
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 4.5e-33 147.1 648 29.8
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 5.9e-33 146.7 409 32.3
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 7.7e-33 146.4 608 30.8
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 1.0e-32 146.0 268 38.4
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 1.0e-32 146.0 636 28.3
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 1.3e-32 145.6 305 37.0
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 2.3e-32 144.8 625 28.8
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 2.3e-32 144.8 433 35.6
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 2.9e-32 144.4 314 35.4
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 2.9e-32 144.4 595 29.4
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 1.5e-31 142.1 324 37.7
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 1.5e-31 142.1 277 37.2
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.9e-31 141.7 570 31.1
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.9e-31 141.7 303 40.9
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 1.9e-31 141.7 297 42.8
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 7.2e-31 139.8 375 37.9
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 1.2e-30 139.0 201 44.8
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 1.6e-30 138.7 343 34.4
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 2.1e-30 138.3 375 34.1
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 2.1e-30 138.3 479 32.8
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 2.8e-30 137.9 453 32.7
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 3.6e-30 137.5 674 29.8
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 4.7e-30 137.1 385 33.5
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 6.1e-30 136.7 507 30.6
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 6.1e-30 136.7 561 31.2
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 8.0e-30 136.3 218 42.2
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 1.0e-29 136.0 303 36.3
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 1.0e-29 136.0 231 40.3
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 1.4e-29 135.6 611 28.3
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 3.0e-29 134.4 405 36.5
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 4.0e-29 134.0 438 33.1
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 4.0e-29 134.0 519 32.2
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 5.2e-29 133.7 443 32.5
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 6.8e-29 133.3 656 30.2
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 1.2e-28 132.5 415 36.9
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 2.0e-28 131.7 579 29.7
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 2.0e-28 131.7 366 34.4
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 4.4e-28 130.6 203 40.9
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 5.7e-28 130.2 317 38.2
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 7.5e-28 129.8 219 42.9
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 7.5e-28 129.8 658 29.5
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 1.3e-27 129.0 448 32.6
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 1.7e-27 128.6 331 37.5
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 1.7e-27 128.6 496 31.7
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 1.7e-27 128.6 327 35.2
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 2.2e-27 128.3 575 30.8
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 3.7e-27 127.5 599 28.5
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 4.9e-27 127.1 591 31.3
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 1.1e-26 125.9 237 39.2
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 2.4e-26 124.8 575 28.5
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 4.1e-26 124.0 592 28.2
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 3.5e-25 120.9 551 29.6
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 4.6e-25 120.6 297 35.7
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 5.0e-24 117.1 473 29.8
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 6.6e-24 116.7 226 35.8
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 1.9e-23 115.2 600 30.5
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 2.5e-23 114.8 262 35.9
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 1.2e-22 112.5 219 41.1
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 4.0e-21 107.5 449 32.1
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 2.6e-20 104.8 622 28.1
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 3.4e-20 104.4 410 30.7
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 3.0e-16 91.3 677 28.7
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 4.0e-13 80.9 418 26.1
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 1.2e-12 79.3 427 26.9
Pp3c27_4140 Physcomitrium patens HOM05D006718 ORTHO05D008492 2.9e-11 74.7 276 28.3
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 1.6e-09 68.9 274 25.2
CBR_g22941 Chara braunii HOM05D006718 ORTHO05D008492 1.7e-08 65.5 273 26.7


User provided reference genes

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