Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0068G069 Amborella trichopoda HOM05D002209 ORTHO05D007926 2.5e-156 555.4 292 100.0
CDE08G0043 Ceratophyllum demersum HOM05D002209 ORTHO05D007926 1.2e-84 317.4 237 64.6
TAR622G1089 Trochodendron aralioides HOM05D002209 ORTHO05D007926 3.7e-83 312.4 235 64.3
Nitab4.5_0001158g0030 Nicotiana tabacum HOM05D002209 ORTHO05D007926 3.1e-82 309.3 237 65.4
Peaxi162Scf00683g10026 Petunia axillaris HOM05D002209 ORTHO05D007926 1.2e-81 307.4 235 66.0
Nitab4.5_0012369g0010 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.6e-81 307.0 235 66.0
CSS0012934 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 2.0e-81 306.6 241 63.5
CSS0018698 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 2.0e-81 306.6 241 63.5
Hma1.2p1_1257F.1_g270850 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 2.9e-80 302.8 238 64.3
Nitab4.5_0000150g0080 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.1e-79 300.8 231 66.2
PSO017G1461 Papaver somniferum HOM05D002209 ORTHO05D007926 3.3e-79 299.3 231 62.8
PSO478G0876 Papaver somniferum HOM05D002209 ORTHO05D007926 3.3e-79 299.3 231 62.8
Cfa019698 Carpinus fangiana HOM05D002209 ORTHO05D007926 4.3e-79 298.9 235 62.6
MBI13_g00575_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D007926 9.5e-79 297.7 237 63.3
Duzib160G0876 Durio zibethinus HOM05D002209 ORTHO05D007926 1.6e-78 297.0 236 61.4
Sopen00g010550 Solanum pennellii HOM05D002209 ORTHO05D007926 1.6e-78 297.0 235 64.7
PGSC0003DMG400005659 Solanum tuberosum HOM05D002209 ORTHO05D007926 3.6e-78 295.8 235 64.3
Solyc03g119010.3 Solanum lycopersicum HOM05D002209 ORTHO05D007926 6.1e-78 295.0 231 64.9
Actinidia18911 Actinidia chinensis HOM05D002209 ORTHO05D007926 8.0e-78 294.7 227 64.3
Nn2g14536 Nelumbo nucifera HOM05D002209 ORTHO05D007926 8.0e-78 294.7 238 60.5
Aqoxy3G00431 Aquilegia oxysepala HOM05D002209 ORTHO05D007926 1.4e-77 293.9 236 63.6
CiPaw.15G139100 Carya illinoinensis HOM05D002209 ORTHO05D007926 1.8e-77 293.5 232 62.5
Rhsim12G0139900 Rhododendron simsii HOM05D002209 ORTHO05D007926 1.8e-77 293.5 238 61.8
Atru.chr9.948 Acer truncatum HOM05D002209 ORTHO05D007926 4.0e-77 292.4 231 63.6
PGR083G0394 Punica granatum HOM05D002209 ORTHO05D007926 5.2e-77 292.0 236 60.2
SalBow5G1692 Salvia bowleyana HOM05D002209 ORTHO05D007926 1.2e-76 290.8 210 68.6
Lsat_1_v5_gn_3_114081 Lactuca sativa HOM05D002209 ORTHO05D007926 3.4e-76 289.3 235 62.1
CsaV3_1G007020 Cucumis sativus L. HOM05D002209 ORTHO05D007926 1.3e-75 287.3 235 58.7
Thecc.06G020700 Theobroma cacao HOM05D002209 ORTHO05D007926 1.7e-75 287.0 235 60.0
ClCG04G010780 Citrullus lanatus HOM05D002209 ORTHO05D007926 2.2e-75 286.6 235 59.1
Actinidia35109 Actinidia chinensis HOM05D002209 ORTHO05D007926 2.9e-75 286.2 227 62.6
MELO3C002120.2 Cucumis melo HOM05D002209 ORTHO05D007926 6.4e-75 285.0 235 58.3
ECA240G0871 Erigeron canadensis HOM05D002209 ORTHO05D007926 6.4e-75 285.0 235 60.9
Zm00001eb128260 Zea mays HOM05D002209 ORTHO05D007926 1.8e-74 283.5 234 57.3
CAN.G1129.32 Capsicum annuum HOM05D002209 ORTHO05D007926 5.4e-74 282.0 213 66.2
Migut.L01913 Erythranthe guttata HOM05D002209 ORTHO05D007926 5.4e-74 282.0 230 62.2
MSTRG.22939 Avicennia marina HOM05D002209 ORTHO05D007926 9.2e-74 281.2 226 63.3
Gohir.D06G123100 Gossypium hirsutum HOM05D002209 ORTHO05D007926 1.6e-73 280.4 235 60.4
Gorai.010G143200 Gossypium raimondii HOM05D002209 ORTHO05D007926 3.5e-73 279.3 235 60.0
HPP92_026682 Vanilla planifolia HOM05D002209 ORTHO05D007926 3.5e-73 279.3 233 55.8
QL10p027511 Quercus lobata HOM05D002209 ORTHO05D007926 4.6e-73 278.9 236 58.1
Ciclev10009263m.g Citrus clementina HOM05D002209 ORTHO05D007926 5.9e-73 278.5 235 60.0
Sc10g0009340 Simmondsia chinensis HOM05D002209 ORTHO05D007926 5.9e-73 278.5 237 58.2
Gohir.A06G114800 Gossypium hirsutum HOM05D002209 ORTHO05D007926 7.8e-73 278.1 235 60.0
HanXRQChr03g0090991 Helianthus annuus HOM05D002209 ORTHO05D007926 7.8e-73 278.1 232 60.8
Manes.14G168500 Manihot esculenta HOM05D002209 ORTHO05D007926 7.8e-73 278.1 236 59.7
Potri.015G041800 Populus trichocarpa HOM05D002209 ORTHO05D007926 7.8e-73 278.1 237 59.1
Sabra15G0055300 Salix brachista HOM05D002209 ORTHO05D007926 7.8e-73 278.1 230 60.9
AUR62033751 Chenopodium quinoa HOM05D002209 ORTHO05D007926 1.0e-72 277.7 252 57.9
Sed0021446 Sechium edule HOM05D002209 ORTHO05D007926 2.3e-72 276.6 235 56.6
SGA_v2.0_scaffold21G09613 Striga asiatica HOM05D002209 ORTHO05D007926 2.3e-72 276.6 232 60.8
Phvul.002G327300 Phaseolus vulgaris HOM05D002209 ORTHO05D007926 5.0e-72 275.4 236 57.6
Glyma.05G243600 Glycine max HOM05D002209 ORTHO05D007926 1.1e-71 274.2 237 58.2
Mapoly0110s0002 Marchantia polymorpha HOM05D002209 ORTHO05D007926 3.3e-71 272.7 234 57.7
Ah.11g045280 Amaranthus hybridus HOM05D002209 ORTHO05D007926 4.3e-71 272.3 229 59.8
EL10Ac5g11521 Beta vulgaris HOM05D002209 ORTHO05D007926 5.6e-71 271.9 235 59.6
VMungo0251G3506 Vigna mungo HOM05D002209 ORTHO05D007926 7.3e-71 271.6 236 56.8
Medtr8g106740 Medicago truncatula HOM05D002209 ORTHO05D007926 2.1e-70 270.0 235 56.6
unitig_27.g24963 Utricularia gibba HOM05D002209 ORTHO05D007926 3.6e-70 269.2 237 57.8
CANSAT80G1708 Cannabis sativa HOM05D002209 ORTHO05D007926 4.7e-70 268.9 229 58.5
CANSAT80G2078 Cannabis sativa HOM05D002209 ORTHO05D007926 4.7e-70 268.9 229 58.5
Lalb_Chr09g0330531 Lupinus albus HOM05D002209 ORTHO05D007926 1.8e-69 266.9 213 59.2
MD14G1233600 Malus domestica HOM05D002209 ORTHO05D007926 4.0e-69 265.8 227 59.5
Eucgr.B00853 Eucalyptus grandis HOM05D002209 ORTHO05D007926 5.2e-69 265.4 232 56.0
DCAR_011381 Daucus carota HOM05D002209 ORTHO05D007926 1.2e-68 264.2 235 58.3
Glyma.08G051400 Glycine max HOM05D002209 ORTHO05D007926 1.2e-68 264.2 236 55.9
CARHR093490 Cardamine hirsuta HOM05D002209 ORTHO05D007926 1.5e-68 263.8 236 56.4
TWI81G0293 Tripterygium wilfordii HOM05D002209 ORTHO05D007926 2.0e-68 263.5 238 55.9
MD00G1160500 Malus domestica HOM05D002209 ORTHO05D007926 2.6e-68 263.1 234 57.3
Prupe.5G229800 Prunus persica HOM05D002209 ORTHO05D007926 3.4e-68 262.7 237 55.3
Carub.0003s1789 Capsella rubella HOM05D002209 ORTHO05D007926 5.8e-68 261.9 236 55.9
Sabra15G0061600 Salix brachista HOM05D002209 ORTHO05D007926 7.5e-68 261.5 265 53.2
Pp3c9_17380 Physcomitrium patens HOM05D002209 ORTHO05D007926 9.8e-68 261.2 235 55.3
arahy.Tifrunner.gnm1.ann1.IWL1UH Arachis hypogaea HOM05D002209 ORTHO05D007926 1.3e-67 260.8 231 55.8
Lj4g0023570 Lotus japonicus HOM05D002209 ORTHO05D007926 2.2e-67 260.0 238 55.0
AagrBONN_evm.TU.Sc2ySwM_344.2039 Anthoceros agrestis HOM05D002209 ORTHO05D007926 2.9e-67 259.6 232 53.0
AT3G18165 Arabidopsis thaliana HOM05D002209 ORTHO05D007926 3.7e-67 259.2 236 55.9
BcaB04g20790 Brassica carinata HOM05D002209 ORTHO05D007926 3.7e-67 259.2 236 54.7
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 6.4e-67 258.5 236 55.5
Lalb_Chr16g0387151 Lupinus albus HOM05D002209 ORTHO05D007926 6.4e-67 258.5 193 63.2
TPR.G12761 Trifolium pratense HOM05D002209 ORTHO05D007926 6.4e-67 258.5 236 54.7
BcaC09g48772 Brassica carinata HOM05D002209 ORTHO05D007926 8.3e-67 258.1 236 55.5
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 8.3e-67 258.1 236 55.5
AL3G31340 Arabidopsis lyrata HOM05D002209 ORTHO05D007926 4.1e-66 255.8 236 55.1
arahy.Tifrunner.gnm1.ann1.7LX2IS Arachis hypogaea HOM05D002209 ORTHO05D007926 4.1e-66 255.8 235 54.0
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 4.1e-66 255.8 236 54.7
C05p47920 Brassica napus HOM05D002209 ORTHO05D007926 4.1e-66 255.8 236 54.7
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 4.1e-66 255.8 236 54.7
Thhalv10021375m.g Eutrema salsugineum HOM05D002209 ORTHO05D007926 5.4e-66 255.4 236 54.2
Sp3g16280 Schrenkiella parvula HOM05D002209 ORTHO05D007926 7.0e-66 255.0 236 54.7
BcaC05g28661 Brassica carinata HOM05D002209 ORTHO05D007926 9.2e-66 254.6 236 54.7
BolC5t33504H Brassica oleracea HOM05D002209 ORTHO05D007926 9.2e-66 254.6 236 54.7
THA.LOC104820370 Tarenaya hassleriana HOM05D002209 ORTHO05D007926 9.2e-66 254.6 236 54.7
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 1.2e-65 254.2 233 55.8
BraA05t21994Z Brassica rapa HOM05D002209 ORTHO05D007926 2.0e-65 253.4 236 54.7
A05p31590 Brassica napus HOM05D002209 ORTHO05D007926 2.7e-65 253.1 236 54.2
arahy.Tifrunner.gnm1.ann1.X5TZ4V Arachis hypogaea HOM05D002209 ORTHO05D007926 1.0e-64 251.1 235 54.5
arahy.Tifrunner.gnm1.ann1.A2QZNW Arachis hypogaea HOM05D002209 ORTHO05D007926 3.0e-64 249.6 235 54.0
GSVIVG01008385001 Vitis vinifera HOM05D002209 ORTHO05D007926 3.0e-64 249.6 182 67.0
Lj9A422G65 Lonicera japonica HOM05D002209 ORTHO05D007926 7.3e-63 245.0 203 62.1
Hund02335 Selenicereus undatus HOM05D002209 ORTHO05D007926 1.6e-62 243.8 232 57.3
vmacro16426 Vaccinium macrocarpon HOM05D002209 ORTHO05D007926 2.6e-60 236.5 309 44.7
COL.COLO4_07530 Corchorus olitorius HOM05D002209 ORTHO05D007926 6.4e-59 231.9 185 61.1
Cc04_g06640 Coffea canephora HOM05D002209 ORTHO05D007926 1.1e-55 221.1 182 61.0
Ca_14628_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 7.3e-55 218.4 222 52.3
RcHm_v2.0_Chr7g0178821 Rosa chinensis HOM05D002209 ORTHO05D007926 7.3e-55 218.4 234 50.4
FvH4_5g17030 Fragaria vesca HOM05D002209 ORTHO05D007926 1.4e-53 214.2 234 50.4
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 4.0e-53 212.6 220 49.5
FAN13G0553 Fragaria x ananassa HOM05D002209 ORTHO05D007926 5.2e-53 212.2 234 50.0
Dinv13547 Davidia involucrata HOM05D002209 ORTHO05D007926 1.2e-52 211.1 237 48.9
FAN08G0602 Fragaria x ananassa HOM05D002209 ORTHO05D007926 1.2e-52 211.1 234 49.6
SMO339G0064 Selaginella moellendorffii HOM05D002209 ORTHO05D007926 4.4e-52 209.1 238 43.7
FAN18G2854 Fragaria x ananassa HOM05D002209 ORTHO05D007926 2.9e-51 206.5 234 49.1
AUR62029954 Chenopodium quinoa HOM05D002209 ORTHO05D007926 6.4e-51 205.3 186 58.1
HPP92_018005 Vanilla planifolia HOM05D002209 ORTHO05D007926 8.4e-51 204.9 196 50.0
SEGI_33728 Sequoiadendron giganteum HOM05D002209 ORTHO05D007926 4.1e-50 202.6 131 71.8
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 6.0e-49 198.7 233 47.6
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 2.5e-47 193.4 137 69.3
Oeu014368.1 Olea europaea HOM05D002209 ORTHO05D007926 7.3e-47 191.8 155 61.9
Hma1.2p1_1257F.1_g270860 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 2.6e-44 183.3 139 66.2
Psat7g003920 Pisum sativum HOM05D002209 ORTHO05D007926 6.0e-41 172.2 137 61.3
Cre17.g697350 Chlamydomonas reinhardtii HOM05D002209 ORTHO05D007926 3.9e-32 142.9 197 41.6
MCO11G869 Micromonas commoda HOM05D002209 ORTHO05D007926 3.3e-31 139.8 227 37.4
C05p44850 Brassica napus HOM05D002209 ORTHO05D007926 5.7e-15 85.9 79 51.9
BolC5t33212H Brassica oleracea HOM05D002209 ORTHO05D007926 5.7e-15 85.9 79 51.9
AUR62029953 Chenopodium quinoa HOM05D002209 ORTHO05D007926 9.0e-13 78.6 72 54.2
Ca_17308_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 1.4e-10 71.2 71 50.7
Psat7g003960 Pisum sativum HOM05D002209 ORTHO05D007926 1.4e-10 71.2 71 49.3
Ca_29797_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 1.6e-09 67.8 64 56.2
Pp3c15_21980 Physcomitrium patens HOM05D002209 ORTHO05D312687 4.8e-06 56.2 40 62.5


User provided reference genes

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