Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0068G039 Amborella trichopoda HOM05D005841 ORTHO05D007132 1.6e-126 456.1 222 100.0
PSO339G0077 Papaver somniferum HOM05D005841 ORTHO05D007132 2.6e-81 305.8 216 69.9
PSO384G2928 Papaver somniferum HOM05D005841 ORTHO05D007132 1.0e-80 303.9 216 69.4
Atru.chr12.1096 Acer truncatum HOM05D005841 ORTHO05D007132 8.8e-77 290.8 216 67.1
Glyma.06G313000 Glycine max HOM05D005841 ORTHO05D007132 9.7e-76 287.3 217 67.3
CSS0023245 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 2.8e-75 285.8 220 63.2
Dinv24065 Davidia involucrata HOM05D005841 ORTHO05D007132 2.8e-75 285.8 216 64.4
CDE02G3427 Ceratophyllum demersum HOM05D005841 ORTHO05D007132 4.8e-75 285.0 217 67.7
Potri.003G189400 Populus trichocarpa HOM05D005841 ORTHO05D007132 4.8e-75 285.0 218 67.0
Potri.001G036400 Populus trichocarpa HOM05D005841 ORTHO05D007132 4.1e-74 282.0 219 67.6
Rhsim03G0005600 Rhododendron simsii HOM05D005841 ORTHO05D007132 7.0e-74 281.2 216 63.4
Sabra01G0025200 Salix brachista HOM05D005841 ORTHO05D007132 7.0e-74 281.2 219 67.6
vmacro07900 Vaccinium macrocarpon HOM05D005841 ORTHO05D007132 7.0e-74 281.2 216 63.9
Sabra03G0139600 Salix brachista HOM05D005841 ORTHO05D007132 9.1e-74 280.8 219 66.7
Dinv14310 Davidia involucrata HOM05D005841 ORTHO05D007132 1.2e-73 280.4 216 63.4
THA.LOC104824200 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 2.7e-73 279.3 216 63.0
GSVIVG01027370001 Vitis vinifera HOM05D005841 ORTHO05D007132 2.7e-73 279.3 225 60.9
CSS0015441 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 4.5e-73 278.5 217 63.1
Aqoxy3G04362 Aquilegia oxysepala HOM05D005841 ORTHO05D007132 1.3e-72 276.9 219 63.0
VMungo1080G1721 Vigna mungo HOM05D005841 ORTHO05D007132 1.7e-72 276.6 217 65.4
Medtr3g011510 Medicago truncatula HOM05D005841 ORTHO05D007132 2.9e-72 275.8 217 64.5
Phvul.005G012800 Phaseolus vulgaris HOM05D005841 ORTHO05D007132 2.9e-72 275.8 217 64.1
THA.LOC104809184 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 3.8e-72 275.4 216 63.0
SEGI_15550 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 5.0e-72 275.0 218 61.9
Glyma.04G125600 Glycine max HOM05D005841 ORTHO05D007132 8.5e-72 274.2 217 64.5
Actinidia22040 Actinidia chinensis HOM05D005841 ORTHO05D007132 1.5e-71 273.5 198 67.7
Lalb_Chr18g0048171 Lupinus albus HOM05D005841 ORTHO05D007132 1.5e-71 273.5 216 62.5
Ca_26913_v3 Cicer arietinum L. HOM05D005841 ORTHO05D007132 1.9e-71 273.1 217 64.5
Psat5g225080 Pisum sativum HOM05D005841 ORTHO05D007132 3.2e-71 272.3 217 64.5
Thecc.10G128400 Theobroma cacao HOM05D005841 ORTHO05D007132 4.2e-71 271.9 213 61.5
MBI19_g24060_MAGBIO Magnolia biondii HOM05D005841 ORTHO05D007132 5.5e-71 271.6 263 55.5
Ciclev10001427m.g Citrus clementina HOM05D005841 ORTHO05D007132 7.2e-71 271.2 171 76.6
Migut.J01841 Erythranthe guttata HOM05D005841 ORTHO05D007132 7.2e-71 271.2 217 61.8
Lj3g0005753 Lotus japonicus HOM05D005841 ORTHO05D007132 9.4e-71 270.8 217 64.5
Sc20g0000960 Simmondsia chinensis HOM05D005841 ORTHO05D007132 9.4e-71 270.8 216 62.0
MSTRG.19910 Avicennia marina HOM05D005841 ORTHO05D007132 1.6e-70 270.0 216 61.6
Oeu007758.1 Olea europaea HOM05D005841 ORTHO05D007132 1.6e-70 270.0 216 59.7
TWI15G0221 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 2.1e-70 269.6 217 63.6
Ah.07g203740 Amaranthus hybridus HOM05D005841 ORTHO05D007132 2.7e-70 269.2 216 61.1
SGA_v2.0_scaffold69G23059 Striga asiatica HOM05D005841 ORTHO05D007132 8.0e-70 267.7 216 61.1
BcaB01g00199 Brassica carinata HOM05D005841 ORTHO05D007132 1.0e-69 267.3 231 58.0
Aa31sc488G20 Aethionema arabicum HOM05D005841 ORTHO05D007132 1.4e-69 266.9 215 61.9
A09p47340 Brassica napus HOM05D005841 ORTHO05D007132 1.8e-69 266.5 187 69.0
Lju124A25T34 Lonicera japonica HOM05D005841 ORTHO05D007132 2.3e-69 266.2 218 62.8
DCAR_019783 Daucus carota HOM05D005841 ORTHO05D007132 3.0e-69 265.8 216 63.0
Gorai.010G208800 Gossypium raimondii HOM05D005841 ORTHO05D007132 4.0e-69 265.4 213 61.0
Gohir.A06G171000 Gossypium hirsutum HOM05D005841 ORTHO05D007132 6.8e-69 264.6 213 61.0
Gohir.D06G178900 Gossypium hirsutum HOM05D005841 ORTHO05D007132 6.8e-69 264.6 213 61.0
Manes.04G153300 Manihot esculenta HOM05D005841 ORTHO05D007132 1.5e-68 263.5 236 58.1
Sp5g08040 Schrenkiella parvula HOM05D005841 ORTHO05D007132 2.6e-68 262.7 180 70.0
BolC8t50563H Brassica oleracea HOM05D005841 ORTHO05D007132 5.7e-68 261.5 188 69.1
TWI38G1535 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 5.7e-68 261.5 217 62.2
COL.COLO4_09288 Corchorus olitorius HOM05D005841 ORTHO05D007132 9.8e-68 260.8 215 59.5
Duzib128G0994 Durio zibethinus HOM05D005841 ORTHO05D007132 9.8e-68 260.8 204 61.8
Os01g0104100 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 1.7e-67 260.0 221 57.9
Thhalv10010421m.g Eutrema salsugineum HOM05D005841 ORTHO05D007132 2.2e-67 259.6 186 67.2
BraA09t40195Z Brassica rapa HOM05D005841 ORTHO05D007132 2.8e-67 259.2 188 68.1
C08p29570 Brassica napus HOM05D005841 ORTHO05D007132 3.7e-67 258.8 188 68.6
EL10Ac9g20941 Beta vulgaris HOM05D005841 ORTHO05D007132 4.8e-67 258.5 217 58.5
Haze_02951 Corylus avellana HOM05D005841 ORTHO05D007132 4.8e-67 258.5 186 67.7
Prupe.2G051700 Prunus persica HOM05D005841 ORTHO05D007132 4.8e-67 258.5 210 62.9
RcHm_v2.0_Chr1g0330051 Rosa chinensis HOM05D005841 ORTHO05D007132 8.3e-67 257.7 221 60.6
BcaB02g07739 Brassica carinata HOM05D005841 ORTHO05D007132 1.1e-66 257.3 186 67.2
QL04p022932 Quercus lobata HOM05D005841 ORTHO05D007132 1.1e-66 257.3 258 52.7
Sed0011967 Sechium edule HOM05D005841 ORTHO05D007132 1.1e-66 257.3 185 67.0
Os02g0795300 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 1.4e-66 256.9 224 58.9
AT3G54360 Arabidopsis thaliana HOM05D005841 ORTHO05D007132 1.8e-66 256.5 185 67.0
MD07G1085200 Malus domestica HOM05D005841 ORTHO05D007132 1.8e-66 256.5 222 59.5
arahy.Tifrunner.gnm1.ann1.AX9XXP Arachis hypogaea HOM05D005841 ORTHO05D007132 2.4e-66 256.1 227 57.7
TPR.G5121 Trifolium pratense HOM05D005841 ORTHO05D007132 2.4e-66 256.1 253 54.9
unitig_699.g19444 Utricularia gibba HOM05D005841 ORTHO05D007132 2.4e-66 256.1 216 59.3
AL5G35420 Arabidopsis lyrata HOM05D005841 ORTHO05D007132 3.1e-66 255.8 180 68.3
Carub.0005s2096 Capsella rubella HOM05D005841 ORTHO05D007132 3.1e-66 255.8 180 67.8
Ah.15g098060 Amaranthus hybridus HOM05D005841 ORTHO05D007132 4.1e-66 255.4 216 59.3
AUR62041651 Chenopodium quinoa HOM05D005841 ORTHO05D007132 4.1e-66 255.4 216 59.3
Cc06_g15810 Coffea canephora HOM05D005841 ORTHO05D007132 5.4e-66 255.0 226 58.4
Eucgr.G03178 Eucalyptus grandis HOM05D005841 ORTHO05D007132 5.4e-66 255.0 233 57.9
A07p22080 Brassica napus HOM05D005841 ORTHO05D007132 7.0e-66 254.6 180 67.8
BraA07t29891Z Brassica rapa HOM05D005841 ORTHO05D007132 7.0e-66 254.6 180 67.8
Lsat_1_v5_gn_5_163601 Lactuca sativa HOM05D005841 ORTHO05D007132 7.0e-66 254.6 180 67.8
Hund07799 Selenicereus undatus HOM05D005841 ORTHO05D007132 7.0e-66 254.6 217 59.9
HanXRQChr13g0390471 Helianthus annuus HOM05D005841 ORTHO05D007132 9.1e-66 254.2 179 66.5
CANSAT56G0667 Cannabis sativa HOM05D005841 ORTHO05D007132 1.2e-65 253.8 233 54.5
CARHR164270 Cardamine hirsuta HOM05D005841 ORTHO05D007132 1.2e-65 253.8 185 65.9
MSTRG.26082 Avicennia marina HOM05D005841 ORTHO05D007132 2.0e-65 253.1 228 57.9
ClCG11G012870 Citrullus lanatus HOM05D005841 ORTHO05D007132 4.5e-65 251.9 185 66.5
ECA248G0891 Erigeron canadensis HOM05D005841 ORTHO05D007132 5.9e-65 251.5 177 66.7
FvH4_7g04620 Fragaria vesca HOM05D005841 ORTHO05D007132 7.7e-65 251.1 217 58.1
FAN06G4202 Fragaria x ananassa HOM05D005841 ORTHO05D007132 7.7e-65 251.1 217 58.1
FAN10G3225 Fragaria x ananassa HOM05D005841 ORTHO05D007132 7.7e-65 251.1 217 58.1
FAN06G1077 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.0e-64 250.8 217 57.6
FAN01G0675 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.3e-64 250.4 217 58.1
Nitab4.5_0000324g0020 Nicotiana tabacum HOM05D005841 ORTHO05D007132 2.2e-64 249.6 264 51.5
MELO3C011778.2 Cucumis melo HOM05D005841 ORTHO05D007132 2.9e-64 249.2 185 64.9
Nitab4.5_0004458g0010 Nicotiana tabacum HOM05D005841 ORTHO05D007132 2.9e-64 249.2 264 51.1
Zm00001eb126920 Zea mays HOM05D005841 ORTHO05D007132 2.9e-64 249.2 238 52.1
CsaV3_5G029280 Cucumis sativus L. HOM05D005841 ORTHO05D007132 3.8e-64 248.8 185 64.9
FAN03G2595 Fragaria x ananassa HOM05D005841 ORTHO05D007132 6.5e-64 248.1 217 57.6
CiPaw.14G011500 Carya illinoinensis HOM05D005841 ORTHO05D007132 8.5e-64 247.7 270 50.7
Peaxi162Scf00258g00731 Petunia axillaris HOM05D005841 ORTHO05D007132 3.2e-63 245.7 263 50.6
Sed0002293 Sechium edule HOM05D005841 ORTHO05D007132 7.2e-63 244.6 223 56.5
AUR62035532 Chenopodium quinoa HOM05D005841 ORTHO05D007132 1.2e-62 243.8 216 56.9
AUR62041645 Chenopodium quinoa HOM05D005841 ORTHO05D007132 4.7e-62 241.9 216 57.4
PGSC0003DMG400023670 Solanum tuberosum HOM05D005841 ORTHO05D007132 3.4e-60 235.7 281 47.3
arahy.Tifrunner.gnm1.ann1.87YK44 Arachis hypogaea HOM05D005841 ORTHO05D007132 1.3e-59 233.8 216 55.1
Nn2g15922 Nelumbo nucifera HOM05D005841 ORTHO05D007132 1.1e-58 230.7 216 56.5
Pp3c4_17260 Physcomitrium patens HOM05D005841 ORTHO05D007132 1.1e-58 230.7 167 64.1
Mapoly0042s0033 Marchantia polymorpha HOM05D005841 ORTHO05D007132 1.8e-58 229.9 213 54.5
Solyc10g080520.3 Solanum lycopersicum HOM05D005841 ORTHO05D007132 5.4e-58 228.4 229 52.4
Sopen10g031070 Solanum pennellii HOM05D005841 ORTHO05D007132 9.2e-58 227.6 306 43.1
AagrBONN_evm.TU.Sc2ySwM_344.2135 Anthoceros agrestis HOM05D005841 ORTHO05D007132 2.5e-55 219.5 234 50.9
SMO194G0025 Selaginella moellendorffii HOM05D005841 ORTHO05D007132 8.0e-54 214.5 169 57.4
BcaC08g44679 Brassica carinata HOM05D005841 ORTHO05D007132 4.0e-53 212.2 198 53.5
C06p22120 Brassica napus HOM05D005841 ORTHO05D007132 7.5e-52 208.0 149 65.8
BolC6t37399H Brassica oleracea HOM05D005841 ORTHO05D007132 7.5e-52 208.0 149 65.8
Gohir.D10G200101 Gossypium hirsutum HOM05D005841 ORTHO05D007132 3.7e-51 205.7 152 65.1
SEGI_12352 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 1.6e-46 190.3 154 60.4
HPP92_001714 Vanilla planifolia HOM05D005841 ORTHO05D007132 3.1e-45 186.0 131 67.2
Gorai.011G224300 Gossypium raimondii HOM05D005841 ORTHO05D007132 1.5e-39 167.2 157 55.4
AUR62039567 Chenopodium quinoa HOM05D005841 ORTHO05D007132 6.2e-38 161.8 128 64.8
CBR_g19049 Chara braunii HOM05D005841 ORTHO05D007132 3.7e-35 152.5 243 38.3
Hma1.2p1_3953F.1_g338060 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 2.3e-24 116.7 81 71.6
Psat0s5799g0040 Pisum sativum HOM05D005841 ORTHO05D007132 1.9e-10 70.5 74 52.7
Cre03.g172600 Chlamydomonas reinhardtii HOM05D005841 ORTHO05D007132 2.7e-09 66.6 81 38.3


User provided reference genes

Program Settings