Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 2.9e-88 328.6 167 100.0
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 1.8e-45 186.4 105 91.4
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 1.4e-37 160.2 109 73.4
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 3.1e-34 149.1 102 70.6
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 6.9e-34 147.9 117 65.0
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 3.4e-33 145.6 103 68.0
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 1.3e-32 143.7 116 62.1
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 1.3e-32 143.7 116 62.9
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 2.9e-32 142.5 105 68.6
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 2.9e-32 142.5 116 63.8
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 1.1e-31 140.6 123 59.3
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 1.4e-31 140.2 116 61.2
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 1.4e-31 140.2 116 61.2
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 2.5e-31 139.4 108 63.0
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 3.2e-31 139.0 119 61.3
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 4.2e-31 138.7 119 61.3
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 5.5e-31 138.3 123 58.5
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 5.5e-31 138.3 100 67.0
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 7.2e-31 137.9 116 59.5
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 1.2e-30 137.1 111 61.3
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 1.6e-30 136.7 116 59.5
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 1.6e-30 136.7 124 58.1
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 1.6e-30 136.7 120 62.5
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 1.6e-30 136.7 105 65.7
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 2.1e-30 136.3 123 57.7
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 2.1e-30 136.3 123 57.7
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 2.1e-30 136.3 122 60.7
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 2.1e-30 136.3 111 61.3
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 2.1e-30 136.3 111 61.3
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 2.1e-30 136.3 103 67.0
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 2.7e-30 136.0 116 58.6
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 2.7e-30 136.0 116 58.6
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 3.6e-30 135.6 125 56.8
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 4.7e-30 135.2 111 61.3
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 4.7e-30 135.2 111 61.3
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 4.7e-30 135.2 120 59.2
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 1.0e-29 134.0 110 60.9
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 1.4e-29 133.7 124 57.3
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 1.4e-29 133.7 116 58.6
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 1.4e-29 133.7 111 60.4
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 1.4e-29 133.7 111 60.4
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 1.8e-29 133.3 120 56.7
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 2.3e-29 132.9 111 59.5
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 2.3e-29 132.9 114 58.8
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 3.0e-29 132.5 123 56.9
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 3.9e-29 132.1 121 59.5
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 5.1e-29 131.7 116 58.6
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 6.7e-29 131.3 111 59.5
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 8.8e-29 131.0 126 56.3
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 1.5e-28 130.2 114 57.9
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 2.6e-28 129.4 115 57.4
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 3.3e-28 129.0 116 57.8
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 3.3e-28 129.0 111 57.7
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 3.3e-28 129.0 112 57.1
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 3.3e-28 129.0 124 54.8
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 3.3e-28 129.0 124 54.8
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 4.4e-28 128.6 116 57.8
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 4.4e-28 128.6 116 56.0
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 5.7e-28 128.3 116 56.0
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 5.7e-28 128.3 116 56.0
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 5.7e-28 128.3 129 55.0
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 7.4e-28 127.9 116 55.2
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 7.4e-28 127.9 124 53.2
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 9.7e-28 127.5 107 60.7
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 9.7e-28 127.5 111 57.7
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 1.3e-27 127.1 110 59.1
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 1.3e-27 127.1 111 57.7
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 2.8e-27 125.9 116 55.2
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 2.8e-27 125.9 116 55.2
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 2.8e-27 125.9 124 55.6
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 2.8e-27 125.9 124 55.6
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 3.7e-27 125.6 116 54.3
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 4.8e-27 125.2 116 54.3
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 4.8e-27 125.2 119 56.3
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 1.1e-26 124.0 111 57.7
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 1.1e-26 124.0 113 57.5
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 1.4e-26 123.6 116 53.4
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 1.4e-26 123.6 115 54.8
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 1.4e-26 123.6 116 53.4
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 1.4e-26 123.6 115 56.5
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 1.8e-26 123.2 94 67.0
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 1.8e-26 123.2 111 56.8
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 3.1e-26 122.5 110 58.2
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 3.1e-26 122.5 116 54.3
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 4.1e-26 122.1 116 54.3
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 4.1e-26 122.1 116 54.3
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 5.3e-26 121.7 110 57.3
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 6.9e-26 121.3 117 53.0
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 9.1e-26 120.9 116 53.4
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 1.5e-25 120.2 116 53.4
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 1.5e-25 120.2 116 54.3
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 3.4e-25 119.0 116 52.6
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 3.4e-25 119.0 88 64.8
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 1.3e-24 117.1 116 53.4
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 1.7e-24 116.7 115 53.9
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.2e-24 116.3 117 52.1
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 2.2e-24 116.3 115 53.0
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 3.8e-24 115.5 111 55.0
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 3.8e-24 115.5 122 50.8
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 6.5e-24 114.8 107 53.3
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 4.2e-23 112.1 101 54.5
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 4.2e-23 112.1 115 51.3
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 2.1e-22 109.8 115 51.3
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.7e-22 109.4 108 52.8
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.6e-22 109.0 117 51.3
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 1.4e-21 107.1 113 53.1
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.8e-21 106.7 117 51.3
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.0e-20 103.2 108 52.8
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 2.0e-20 103.2 79 63.3
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 1.7e-19 100.1 124 46.0
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.8e-18 96.7 108 49.1
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.1e-18 95.9 113 48.7
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.1e-18 95.5 108 49.1
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 8.5e-16 87.8 79 55.7
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 1.4e-13 80.5 114 39.5
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 5.9e-09 65.1 57 59.6
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 7.2e-07 58.2 109 32.1


User provided reference genes

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