Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 5.8e-49 197.2 97 100.0
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 2.6e-25 118.6 80 68.8
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 3.8e-24 114.8 78 66.7
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 4.9e-24 114.4 86 65.1
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 6.4e-24 114.0 82 68.3
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 8.4e-24 113.6 86 65.1
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 8.4e-24 113.6 74 73.0
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 8.4e-24 113.6 74 73.0
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 8.4e-24 113.6 74 73.0
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 8.4e-24 113.6 74 73.0
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 1.1e-23 113.2 86 65.1
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 1.4e-23 112.8 86 65.1
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 1.9e-23 112.5 78 67.9
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 2.4e-23 112.1 86 65.1
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 2.4e-23 112.1 81 69.1
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 2.4e-23 112.1 74 71.6
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 4.2e-23 111.3 74 73.0
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 5.5e-23 110.9 81 65.4
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 5.5e-23 110.9 86 64.0
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 7.1e-23 110.5 86 65.1
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 7.1e-23 110.5 77 66.2
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 9.3e-23 110.2 86 64.0
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 9.3e-23 110.2 86 64.0
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 9.3e-23 110.2 83 67.5
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 9.3e-23 110.2 79 65.8
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 1.2e-22 109.8 86 64.0
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 1.2e-22 109.8 86 64.0
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 1.2e-22 109.8 86 64.0
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 1.2e-22 109.8 86 64.0
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 1.2e-22 109.8 82 64.6
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 1.6e-22 109.4 78 67.9
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 1.6e-22 109.4 78 67.9
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 1.6e-22 109.4 74 70.3
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 2.1e-22 109.0 74 70.3
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 2.7e-22 108.6 86 62.8
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 2.7e-22 108.6 78 65.4
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 2.7e-22 108.6 81 63.0
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 3.5e-22 108.2 83 65.1
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 3.5e-22 108.2 83 66.3
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 3.5e-22 108.2 74 68.9
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 3.5e-22 108.2 78 65.4
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 4.6e-22 107.8 78 65.4
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 4.6e-22 107.8 84 64.3
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 4.6e-22 107.8 79 67.1
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 6.0e-22 107.5 74 68.9
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 6.0e-22 107.5 80 63.8
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 7.9e-22 107.1 81 63.0
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 7.9e-22 107.1 81 63.0
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 7.9e-22 107.1 81 63.0
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 7.9e-22 107.1 74 67.6
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 1.0e-21 106.7 74 68.9
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 1.3e-21 106.3 78 65.4
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 1.3e-21 106.3 78 65.4
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 1.8e-21 105.9 74 66.2
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 1.8e-21 105.9 74 67.6
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 2.3e-21 105.5 74 66.2
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 2.3e-21 105.5 80 63.8
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 2.3e-21 105.5 74 67.6
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 2.3e-21 105.5 74 67.6
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 3.0e-21 105.1 80 63.8
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 3.9e-21 104.8 74 64.9
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 3.9e-21 104.8 81 59.3
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 3.9e-21 104.8 80 65.0
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 5.1e-21 104.4 77 66.2
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 5.1e-21 104.4 74 68.9
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 5.1e-21 104.4 74 67.6
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 6.7e-21 104.0 80 63.8
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 8.7e-21 103.6 80 65.0
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 8.7e-21 103.6 74 67.6
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 8.7e-21 103.6 78 64.1
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.1e-20 103.2 73 64.4
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 1.5e-20 102.8 86 58.1
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 1.9e-20 102.4 84 61.9
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 1.9e-20 102.4 74 64.9
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 1.9e-20 102.4 74 64.9
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 3.3e-20 101.7 74 64.9
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 3.3e-20 101.7 74 64.9
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 3.3e-20 101.7 80 62.5
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 3.3e-20 101.7 80 62.5
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 3.3e-20 101.7 74 64.9
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 3.3e-20 101.7 73 64.4
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 4.3e-20 101.3 95 53.7
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 4.3e-20 101.3 74 63.5
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 5.6e-20 100.9 80 63.8
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 7.4e-20 100.5 74 63.5
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 7.4e-20 100.5 78 61.5
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 9.6e-20 100.1 71 66.2
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 9.6e-20 100.1 74 63.5
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 1.6e-19 99.4 78 61.5
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 1.6e-19 99.4 77 59.7
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 1.6e-19 99.4 78 62.8
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 2.8e-19 98.6 78 60.3
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 3.7e-19 98.2 80 61.2
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 3.7e-19 98.2 80 62.5
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 3.7e-19 98.2 82 58.5
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 4.8e-19 97.8 80 58.8
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 6.2e-19 97.4 74 62.2
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 8.2e-19 97.1 79 60.8
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 8.2e-19 97.1 74 60.8
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 8.2e-19 97.1 79 59.5
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 4.0e-18 94.7 76 61.8
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 9.0e-18 93.6 75 60.0
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 1.5e-17 92.8 79 59.5
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 2.0e-17 92.4 77 58.4
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 3.4e-17 91.7 79 57.0
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 5.8e-17 90.9 95 52.6
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 1.9e-15 85.9 74 54.1
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 1.9e-15 85.9 76 52.6
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 3.5e-14 81.6 69 58.0
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 2.0e-09 65.9 36 83.3
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 1.7e-08 62.8 63 60.3
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 6.5e-08 60.8 34 85.3
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 3.6e-06 55.1 51 54.9


User provided reference genes

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