Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 2.2e-50 202.6 153 100.0
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 3.6e-37 158.7 153 57.5
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 3.0e-36 155.6 151 57.6
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 5.2e-36 154.8 154 57.1
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 8.9e-36 154.1 153 56.9
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 1.5e-35 153.3 149 57.0
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 3.4e-35 152.1 153 54.9
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 3.4e-35 152.1 153 54.9
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 3.4e-35 152.1 151 57.6
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 1.3e-34 150.2 153 56.9
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 4.9e-34 148.3 149 57.0
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 4.9e-34 148.3 149 57.7
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 6.4e-34 147.9 150 56.7
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 8.3e-34 147.5 150 56.7
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 1.1e-33 147.1 158 55.7
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 1.4e-33 146.7 149 55.7
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 1.4e-33 146.7 145 55.2
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 2.4e-33 146.0 153 56.9
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 2.4e-33 146.0 151 55.0
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 2.4e-33 146.0 151 55.0
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 2.4e-33 146.0 153 56.9
DCAR_003178 Daucus carota HOM05D006047 ORTHO05D007353 4.1e-33 145.2 150 57.3
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 4.1e-33 145.2 148 56.1
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 7.0e-33 144.4 153 55.6
CANSAT21G1105 Cannabis sativa HOM05D006047 ORTHO05D007353 9.2e-33 144.1 150 56.0
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 9.2e-33 144.1 149 55.0
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 1.2e-32 143.7 145 56.6
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 1.6e-32 143.3 148 55.4
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 2.0e-32 142.9 150 56.7
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 2.0e-32 142.9 148 55.4
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 2.7e-32 142.5 151 55.0
Prupe.8G167000 Prunus persica HOM05D006047 ORTHO05D007353 3.5e-32 142.1 146 55.5
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 3.5e-32 142.1 150 52.7
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 5.9e-32 141.4 146 54.8
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 5.9e-32 141.4 152 53.9
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 7.8e-32 141.0 149 54.4
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 1.0e-31 140.6 144 56.2
unitig_52.g17373 Utricularia gibba HOM05D006047 ORTHO05D007353 1.0e-31 140.6 149 55.0
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 2.3e-31 139.4 152 53.9
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 2.3e-31 139.4 149 54.4
RcHm_v2.0_Chr6g0278481 Rosa chinensis HOM05D006047 ORTHO05D007353 2.3e-31 139.4 149 55.7
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 2.3e-31 139.4 149 54.4
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 2.3e-31 139.4 149 54.4
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 3.0e-31 139.0 149 55.7
Eucgr.G01785 Eucalyptus grandis HOM05D006047 ORTHO05D007353 3.9e-31 138.7 154 50.6
Gohir.A03G205400 Gossypium hirsutum HOM05D006047 ORTHO05D007353 3.9e-31 138.7 149 53.0
Lalb_Chr01g0021661 Lupinus albus HOM05D006047 ORTHO05D007353 3.9e-31 138.7 149 52.3
Ca_08043_v3 Cicer arietinum L. HOM05D006047 ORTHO05D007353 5.0e-31 138.3 149 52.3
Gohir.D02G226700 Gossypium hirsutum HOM05D006047 ORTHO05D007353 6.6e-31 137.9 149 52.3
Gorai.005G254600 Gossypium raimondii HOM05D006047 ORTHO05D007353 6.6e-31 137.9 149 52.3
FvH4_2g15480 Fragaria vesca HOM05D006047 ORTHO05D007353 8.6e-31 137.5 150 54.0
FAN20G3211 Fragaria x ananassa HOM05D006047 ORTHO05D007353 8.6e-31 137.5 150 54.0
FAN24G2638 Fragaria x ananassa HOM05D006047 ORTHO05D007353 8.6e-31 137.5 150 54.0
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 8.6e-31 137.5 148 54.1
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 8.6e-31 137.5 149 61.7
Gohir.A01G002200 Gossypium hirsutum HOM05D006047 ORTHO05D007353 1.1e-30 137.1 151 54.3
Medtr7g081070 Medicago truncatula HOM05D006047 ORTHO05D007353 1.1e-30 137.1 149 52.3
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 1.5e-30 136.7 148 53.4
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 1.5e-30 136.7 152 62.5
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 1.9e-30 136.3 144 56.9
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 1.9e-30 136.3 144 54.9
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 1.9e-30 136.3 144 54.9
HanXRQChr10g0300821 Helianthus annuus HOM05D006047 ORTHO05D007353 2.5e-30 136.0 158 50.0
Lj1g0011713 Lotus japonicus HOM05D006047 ORTHO05D007353 2.5e-30 136.0 149 53.0
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 3.3e-30 135.6 150 53.3
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 3.3e-30 135.6 146 52.1
FAN15G3104 Fragaria x ananassa HOM05D006047 ORTHO05D007353 4.3e-30 135.2 149 53.7
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 4.3e-30 135.2 149 51.0
Psat3g100240 Pisum sativum HOM05D006047 ORTHO05D007353 4.3e-30 135.2 149 51.7
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 5.6e-30 134.8 155 52.3
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 5.6e-30 134.8 149 51.7
Ah.01g023100 Amaranthus hybridus HOM05D006047 ORTHO05D007353 7.3e-30 134.4 148 51.4
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 7.3e-30 134.4 149 52.3
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 9.5e-30 134.0 145 58.6
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 2.8e-29 132.5 147 51.7
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 2.8e-29 132.5 144 54.2
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 3.6e-29 132.1 136 59.6
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 3.6e-29 132.1 145 53.1
Lalb_Chr19g0126421 Lupinus albus HOM05D006047 ORTHO05D007353 4.7e-29 131.7 149 50.3
Sed0000957 Sechium edule HOM05D006047 ORTHO05D007353 4.7e-29 131.7 146 50.7
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 6.2e-29 131.3 135 57.0
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 8.0e-29 131.0 143 62.2
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 1.4e-28 130.2 147 51.0
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 1.8e-28 129.8 135 57.0
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 1.8e-28 129.8 146 50.0
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 2.3e-28 129.4 139 59.0
AL4G10070 Arabidopsis lyrata HOM05D006047 ORTHO05D007353 4.0e-28 128.6 145 49.7
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 4.0e-28 128.6 149 51.0
Zm00001eb331780 Zea mays HOM05D006047 ORTHO05D007353 5.2e-28 128.3 150 48.7
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 6.8e-28 127.9 146 49.3
SHI05754 Sapria himalayana HOM05D006047 ORTHO05D007353 6.8e-28 127.9 146 47.3
Carub.0004s0003 Capsella rubella HOM05D006047 ORTHO05D007353 8.9e-28 127.5 145 49.7
AT2G20940 Arabidopsis thaliana HOM05D006047 ORTHO05D007353 1.5e-27 126.7 145 49.0
Solyc03g044590.2 Solanum lycopersicum HOM05D006047 ORTHO05D007353 2.0e-27 126.3 149 49.7
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 4.4e-27 125.2 144 51.4
CARHR174220 Cardamine hirsuta HOM05D006047 ORTHO05D007353 5.8e-27 124.8 147 47.6
Duzib248G0446 Durio zibethinus HOM05D006047 ORTHO05D007353 7.5e-27 124.4 148 50.0
THA.LOC104824759 Tarenaya hassleriana HOM05D006047 ORTHO05D007353 9.8e-27 124.0 150 60.0
Sp4g00130 Schrenkiella parvula HOM05D006047 ORTHO05D007353 1.3e-26 123.6 148 48.6
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 1.7e-26 123.2 136 54.4
Zm00001eb103880 Zea mays HOM05D006047 ORTHO05D007353 3.7e-26 122.1 150 49.3
Thhalv10000376m.g Eutrema salsugineum HOM05D006047 ORTHO05D007353 4.9e-26 121.7 145 48.3
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 4.9e-26 121.7 136 51.5
BcaB06g27764 Brassica carinata HOM05D006047 ORTHO05D007353 8.3e-26 120.9 142 48.6
A04p15840 Brassica napus HOM05D006047 ORTHO05D007353 1.1e-25 120.6 142 47.9
C04p50240 Brassica napus HOM05D006047 ORTHO05D007353 1.1e-25 120.6 142 47.9
BolC4t26624H Brassica oleracea HOM05D006047 ORTHO05D007353 1.1e-25 120.6 142 47.9
BraA04t17215Z Brassica rapa HOM05D006047 ORTHO05D007353 1.1e-25 120.6 142 47.9
AagrBONN_evm.TU.Sc2ySwM_362.1962 Anthoceros agrestis HOM05D006047 ORTHO05D007353 5.4e-25 118.2 145 50.3
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 2.0e-24 116.3 135 60.7
TWI31G0769 Tripterygium wilfordii HOM05D006047 ORTHO05D007353 3.9e-23 112.1 148 45.3
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 5.6e-22 108.2 143 46.2
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 4.4e-19 98.6 142 51.4
SEGI_27161 Sequoiadendron giganteum HOM05D006047 ORTHO05D007353 5.8e-19 98.2 121 49.6
Sopen11g011060 Solanum pennellii HOM05D011435 ORTHO05D012656 2.9e-18 95.9 141 42.6
MD05G1195600 Malus domestica HOM05D006047 ORTHO05D007353 8.3e-18 94.4 129 45.7
SMO367G0473 Selaginella moellendorffii HOM05D006047 ORTHO05D007353 1.4e-17 93.6 144 42.4
BcaB01g02958 Brassica carinata HOM05D006047 ORTHO05D007353 1.9e-17 93.2 143 40.6
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 4.1e-17 92.0 144 38.2
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 7.1e-17 91.3 125 45.6
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 5.1e-15 85.1 126 48.4
PGR083G0073 Punica granatum HOM05D006047 ORTHO05D007353 1.9e-14 83.2 145 37.2
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 1.5e-11 73.6 54 64.8
HPP92_025899 Vanilla planifolia HOM05D006047 ORTHO05D007353 2.0e-11 73.2 59 57.6
BcaC01g04858 Brassica carinata HOM05D006047 ORTHO05D007353 5.8e-11 71.6 145 33.8
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 2.2e-10 69.7 49 69.4
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 6.4e-10 68.2 54 63.0
Sed0002860 Sechium edule HOM05D006047 ORTHO05D007353 7.1e-09 64.7 54 59.3
Zm00001eb046330 Zea mays HOM05D001486 ORTHO05D036446 1.2e-08 63.9 44 68.2
TAR624G0128 Trochodendron aralioides HOM05D006047 ORTHO05D007353 2.1e-08 63.2 59 55.9
Zm00001eb181930 Zea mays HOM05D001107 ORTHO05D007353 1.9e-06 56.6 44 65.9


User provided reference genes

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