Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0064G033 Amborella trichopoda HOM05D006409 ORTHO05D008250 1.2e-270 936.0 510 100.0
TAR629G2567 Trochodendron aralioides HOM05D006409 ORTHO05D008250 9.6e-103 378.3 439 53.1
Aqoxy3G03581 Aquilegia oxysepala HOM05D006409 ORTHO05D008250 2.6e-84 317.0 478 44.8
PSO302G0195 Papaver somniferum HOM05D006409 ORTHO05D008250 3.8e-83 313.2 493 42.0
PSO017G5610 Papaver somniferum HOM05D006409 ORTHO05D008250 1.6e-81 307.8 449 44.3
PSO478G4763 Papaver somniferum HOM05D006409 ORTHO05D008250 1.3e-78 298.1 449 43.9
Ciclev10020474m.g Citrus clementina HOM05D006409 ORTHO05D008250 1.4e-77 294.7 395 46.6
Thecc.03G097200 Theobroma cacao HOM05D006409 ORTHO05D008250 2.2e-75 287.3 393 45.3
QL10p018676 Quercus lobata HOM05D006409 ORTHO05D008250 1.4e-72 278.1 410 45.4
Nn4g23374 Nelumbo nucifera HOM05D006409 ORTHO05D008250 2.6e-71 273.9 449 42.5
Prupe.5G201100 Prunus persica HOM05D006409 ORTHO05D008250 3.3e-71 273.5 400 46.8
Potri.015G048900 Populus trichocarpa HOM05D006409 ORTHO05D008250 1.7e-70 271.2 403 44.4
Duzib084G0027 Durio zibethinus HOM05D006409 ORTHO05D008250 2.2e-70 270.8 403 44.4
Sabra15G0078400 Salix brachista HOM05D006409 ORTHO05D008250 2.2e-70 270.8 393 44.5
CiPaw.11G050000 Carya illinoinensis HOM05D006409 ORTHO05D008250 8.2e-70 268.9 403 44.7
MD14G1208800 Malus domestica HOM05D006409 ORTHO05D008250 1.4e-69 268.1 392 43.9
Dinv38786 Davidia involucrata HOM05D006409 ORTHO05D008250 7.0e-69 265.8 389 45.5
Nitab4.5_0001961g0070 Nicotiana tabacum HOM05D006409 ORTHO05D008250 7.0e-69 265.8 402 43.8
CANSAT80G1113 Cannabis sativa HOM05D006409 ORTHO05D008250 3.8e-67 260.0 401 42.6
Rhsim08G0148500 Rhododendron simsii HOM05D006409 ORTHO05D008250 5.0e-67 259.6 394 45.2
Cfa019299 Carpinus fangiana HOM05D006409 ORTHO05D008250 1.6e-65 254.6 412 43.4
Sopen12g016610 Solanum pennellii HOM05D006409 ORTHO05D008250 8.8e-64 248.8 398 42.2
GSVIVG01007923001 Vitis vinifera HOM05D006409 ORTHO05D008250 1.2e-63 248.4 410 41.5
Lj4g0024886 Lotus japonicus HOM05D006409 ORTHO05D008250 4.4e-63 246.5 398 42.2
Oeu014392.1 Olea europaea HOM05D006409 ORTHO05D006262 4.4e-63 246.5 401 42.4
PGSC0003DMG400012806 Solanum tuberosum HOM05D006409 ORTHO05D008250 7.5e-63 245.7 417 40.8
Manes.14G084000 Manihot esculenta HOM05D006409 ORTHO05D008250 3.7e-62 243.4 397 41.6
FAN18G2755 Fragaria x ananassa HOM05D006409 ORTHO05D008250 2.7e-60 237.3 411 41.4
FAN13G1588 Fragaria x ananassa HOM05D006409 ORTHO05D008250 3.5e-60 236.9 393 42.0
Eucgr.B00571 Eucalyptus grandis HOM05D006409 ORTHO05D008250 5.9e-60 236.1 394 43.9
PGR083G0341 Punica granatum HOM05D006409 ORTHO05D008250 2.2e-59 234.2 382 40.8
THA.LOC104818336 Tarenaya hassleriana HOM05D006409 ORTHO05D008250 2.2e-59 234.2 400 41.8
MSTRG.22971 Avicennia marina HOM05D006409 ORTHO05D008250 2.9e-59 233.8 405 41.5
Gohir.D12G183500 Gossypium hirsutum HOM05D006409 ORTHO05D008250 3.8e-59 233.4 410 40.5
Nitab4.5_0005160g0050 Nicotiana tabacum HOM05D006409 ORTHO05D008250 1.1e-58 231.9 407 40.8
Solyc12g036300.3 Solanum lycopersicum HOM05D006409 ORTHO05D008250 2.5e-58 230.7 398 40.7
Gorai.008G196800 Gossypium raimondii HOM05D006409 ORTHO05D008250 5.5e-58 229.6 393 40.7
Carub.0008s2186 Capsella rubella HOM05D006409 ORTHO05D008250 2.7e-57 227.3 399 38.3
TWI81G1094 Tripterygium wilfordii HOM05D006409 ORTHO05D008250 8.0e-57 225.7 396 41.4
Cpa.g.sc94.9 Carica papaya HOM05D006409 ORTHO05D008250 2.3e-56 224.2 391 39.4
CDE06G0998 Ceratophyllum demersum HOM05D006409 ORTHO05D008250 2.3e-56 224.2 454 37.9
Sp6g35060 Schrenkiella parvula HOM05D006409 ORTHO05D008250 8.8e-56 222.2 404 39.4
Glyma.05G022800 Glycine max HOM05D006409 ORTHO05D008250 1.2e-55 221.9 396 40.4
Actinidia09250 Actinidia chinensis HOM05D006409 ORTHO05D008250 5.7e-55 219.5 349 42.4
MELO3C002015.2 Cucumis melo HOM05D006409 ORTHO05D008250 7.5e-55 219.2 404 40.3
COL.COLO4_22753 Corchorus olitorius HOM05D006409 ORTHO05D008250 1.3e-54 218.4 403 39.5
Peaxi162Scf00106g00081 Petunia axillaris HOM05D006409 ORTHO05D008250 2.2e-54 217.6 404 39.6
CsaV3_1G005860 Cucumis sativus L. HOM05D006409 ORTHO05D008250 2.8e-54 217.2 406 39.4
Haze_07680 Corylus avellana HOM05D006409 ORTHO05D008250 6.3e-54 216.1 324 45.1
RcHm_v2.0_Chr7g0182601 Rosa chinensis HOM05D006409 ORTHO05D008250 1.8e-53 214.5 404 39.1
C03p03950 Brassica napus HOM05D006409 ORTHO05D008250 3.1e-53 213.8 404 38.1
BolC3t12932H Brassica oleracea HOM05D006409 ORTHO05D008250 3.1e-53 213.8 404 38.1
Cc00_g02320 Coffea canephora HOM05D006409 ORTHO05D008250 4.1e-53 213.4 402 40.0
FvH4_5g14277 Fragaria vesca HOM05D006409 ORTHO05D008250 5.4e-53 213.0 344 43.3
SEGI_28191 Sequoiadendron giganteum HOM05D006409 ORTHO05D008250 1.2e-52 211.8 493 34.9
SEGI_37085 Sequoiadendron giganteum HOM05D006409 ORTHO05D008250 1.2e-52 211.8 493 34.9
DCAR_026015 Daucus carota HOM05D006409 ORTHO05D008250 5.9e-52 209.5 397 38.3
AL6G18220 Arabidopsis lyrata HOM05D006409 ORTHO05D008250 7.7e-52 209.1 402 38.1
BcaB01g05645 Brassica carinata HOM05D006409 ORTHO05D008250 1.0e-51 208.8 396 38.9
CARHR205310 Cardamine hirsuta HOM05D006409 ORTHO05D008250 1.3e-51 208.4 402 35.8
Glyma.17G076800 Glycine max HOM05D006409 ORTHO05D008250 1.3e-51 208.4 396 40.2
AL8G37860 Arabidopsis lyrata HOM05D006409 ORTHO05D008250 2.3e-51 207.6 401 38.4
ClCG04G011930 Citrullus lanatus HOM05D006409 ORTHO05D008250 2.3e-51 207.6 406 39.2
arahy.Tifrunner.gnm1.ann1.PS4SMH Arachis hypogaea HOM05D006409 ORTHO05D008250 2.9e-51 207.2 398 37.7
Gohir.A12G180800 Gossypium hirsutum HOM05D006409 ORTHO05D008250 5.0e-51 206.5 410 37.6
vmacro17591 Vaccinium macrocarpon HOM05D006409 ORTHO05D008250 5.0e-51 206.5 305 43.3
BolC9t59643H Brassica oleracea HOM05D006409 ORTHO05D008250 6.6e-51 206.1 395 38.5
BcaC06g32511 Brassica carinata HOM05D001913 ORTHO05D008250 1.9e-50 204.5 404 37.6
Atru.chr9.377 Acer truncatum HOM05D006409 ORTHO05D008250 9.5e-50 202.2 318 44.7
FAN08G0388 Fragaria x ananassa HOM05D006409 ORTHO05D008250 9.5e-50 202.2 404 38.6
Thhalv10013673m.g Eutrema salsugineum HOM05D006409 ORTHO05D008250 1.2e-49 201.8 404 38.4
AT5G07890 Arabidopsis thaliana HOM05D006409 ORTHO05D008250 1.6e-49 201.4 402 36.1
A10p28660 Brassica napus HOM05D006409 ORTHO05D008250 2.1e-49 201.1 394 38.3
CANSAT80G0413 Cannabis sativa HOM05D006409 ORTHO05D008250 2.8e-49 200.7 371 40.4
CAN.G172.10 Capsicum annuum HOM05D006409 ORTHO05D008250 1.4e-48 198.4 354 40.1
arahy.Tifrunner.gnm1.ann1.4D2E4C Arachis hypogaea HOM05D006409 ORTHO05D008250 2.3e-48 197.6 398 37.4
BraA10t44915Z Brassica rapa HOM05D001913 ORTHO05D006405 3.0e-48 197.2 391 38.1
Medtr4g109330 Medicago truncatula HOM05D006409 ORTHO05D008250 3.0e-48 197.2 335 41.8
BcaNung06903 Brassica carinata HOM05D006409 ORTHO05D008250 6.8e-48 196.1 394 38.6
C09p68980 Brassica napus HOM05D006409 ORTHO05D006405 1.2e-47 195.3 398 37.9
BraA03t09701Z Brassica rapa HOM05D006409 ORTHO05D008250 1.5e-47 194.9 402 37.8
VMungo1215G3198 Vigna mungo HOM05D006409 ORTHO05D008250 1.5e-47 194.9 369 39.6
A03p03510 Brassica napus HOM05D006409 ORTHO05D008250 3.4e-47 193.7 401 37.7
Zm00001eb108440 Zea mays HOM05D006409 ORTHO05D008250 5.7e-47 193.0 424 36.3
Phvul.L001604 Phaseolus vulgaris HOM05D006409 ORTHO05D008250 7.5e-47 192.6 396 37.6
AT5G61200 Arabidopsis thaliana HOM05D006409 ORTHO05D008250 2.2e-46 191.0 398 37.2
Carub.0006s0678 Capsella rubella HOM05D006409 ORTHO05D008250 8.3e-46 189.1 379 38.0
Lj5A105T60 Lonicera japonica HOM05D006409 ORTHO05D008250 1.8e-45 188.0 338 40.2
AUR62021594 Chenopodium quinoa HOM05D006409 ORTHO05D008250 2.4e-45 187.6 353 40.5
Os07g0598700 Oryza sativa ssp. japonica HOM05D006409 ORTHO05D008250 3.1e-45 187.2 463 35.6
Lalb_Chr13g0302951 Lupinus albus HOM05D006409 ORTHO05D008250 2.0e-44 184.5 392 36.2
Actinidia04843 Actinidia chinensis HOM05D006409 ORTHO05D008250 2.3e-43 181.0 284 43.3
TPR.G2042 Trifolium pratense HOM05D006409 ORTHO05D008250 1.5e-42 178.3 403 36.5
HanXRQChr09g0270151 Helianthus annuus HOM05D006409 ORTHO05D008250 1.2e-41 175.3 402 35.3
Sed0008489 Sechium edule HOM05D006409 ORTHO05D008250 3.6e-41 173.7 406 37.2
Migut.I00315 Erythranthe guttata HOM05D006409 ORTHO05D008250 1.0e-40 172.2 406 35.2
Psat4g048440 Pisum sativum HOM05D006409 ORTHO05D008250 3.1e-40 170.6 332 37.7
AUR62008498 Chenopodium quinoa HOM05D006409 ORTHO05D008250 1.2e-39 168.7 404 36.4
SalBow5G3762 Salvia bowleyana HOM05D006409 ORTHO05D008250 1.5e-39 168.3 395 35.9
Sc04g0003080 Simmondsia chinensis HOM05D006409 ORTHO05D008250 1.5e-34 151.8 401 34.7
ECA232G2526 Erigeron canadensis HOM05D006409 ORTHO05D008250 1.2e-33 148.7 402 34.1
Hund02605 Selenicereus undatus HOM05D006409 ORTHO05D008250 1.2e-31 142.1 401 32.9
C04p51620 Brassica napus HOM05D006409 ORTHO05D008250 2.6e-31 141.0 297 36.7
BcaC02g08700 Brassica carinata HOM05D006409 ORTHO05D008250 2.4e-29 134.4 285 37.2
Ca_21789_v3 Cicer arietinum L. HOM05D006409 ORTHO05D008250 5.4e-29 133.3 286 36.4
Ah.02g113920 Amaranthus hybridus HOM05D006409 ORTHO05D008250 3.6e-25 120.6 402 29.4
EL10Ac5g11100 Beta vulgaris HOM05D006409 ORTHO05D008250 6.8e-24 116.3 401 29.9
BcaC02g08698 Brassica carinata HOM05D006409 ORTHO05D008250 1.3e-22 112.1 274 36.5
HanXRQChr16g0502261 Helianthus annuus HOM05D006409 ORTHO05D008250 2.7e-20 104.4 374 29.1
Duzib068G0538 Durio zibethinus HOM05D006409 ORTHO05D008250 6.6e-19 99.8 215 34.9
arahy.Tifrunner.gnm1.ann1.LPT8KM Arachis hypogaea HOM05D006409 ORTHO05D008250 4.4e-15 87.0 73 61.6
Actinidia12838 Actinidia chinensis HOM05D006409 ORTHO05D008250 1.1e-13 82.4 90 53.3
AagrBONN_evm.TU.Sc2ySwM_344.1629 Anthoceros agrestis HOM05D006409 ORTHO05D008250 2.1e-12 78.2 285 25.6
Lsat_1_v5_gn_4_110201 Lactuca sativa HOM05D006409 ORTHO05D008250 2.1e-12 78.2 357 25.8
BcaC02g08699 Brassica carinata HOM05D006409 ORTHO05D008250 6.0e-12 76.6 217 31.3
C04p51600 Brassica napus HOM05D006409 ORTHO05D008250 1.6e-09 68.6 79 48.1
SGA_v2.0_scaffold25G10967 Striga asiatica HOM05D006409 ORTHO05D008250 9.0e-08 62.8 362 26.0


User provided reference genes

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