Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 0.0e+00 1552.0 778 100.0
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 4.1e-206 722.2 819 50.2
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 5.3e-193 678.7 818 47.3
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 1.7e-191 673.7 789 47.1
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 1.3e-188 664.1 832 46.6
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 6.9e-185 651.7 817 44.7
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 6.4e-183 645.2 809 44.1
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 5.5e-182 642.1 829 44.4
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 1.5e-179 634.0 823 44.7
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 1.5e-179 634.0 817 44.3
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 7.4e-179 631.7 816 43.4
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 1.3e-178 630.9 816 44.7
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 1.6e-178 630.6 802 44.4
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 1.6e-178 630.6 822 43.6
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 1.6e-178 630.6 819 44.1
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 2.1e-178 630.2 824 44.3
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 2.8e-178 629.8 807 44.0
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 4.0e-177 625.9 808 42.6
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 4.0e-177 625.9 812 43.7
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 5.3e-177 625.5 816 43.5
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 2.6e-176 623.2 805 42.9
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 5.8e-176 622.1 790 42.9
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 2.2e-175 620.2 805 43.4
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 2.9e-175 619.8 816 43.1
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 2.9e-175 619.8 825 41.8
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 3.8e-175 619.4 794 43.6
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 6.5e-175 618.6 805 42.7
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 4.2e-174 615.9 813 42.9
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 1.6e-173 614.0 805 43.5
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 2.1e-173 613.6 805 43.1
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 3.5e-173 612.8 798 43.2
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 4.6e-173 612.5 804 43.2
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 6.0e-173 612.1 808 44.4
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 3.0e-172 609.8 806 42.3
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 5.7e-171 605.5 803 43.6
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 7.4e-171 605.1 802 43.6
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 9.7e-171 604.7 807 44.0
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 9.7e-171 604.7 807 43.9
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 1.6e-170 604.0 804 44.5
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 2.2e-170 603.6 813 42.9
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 2.2e-170 603.6 802 43.1
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 3.7e-170 602.8 798 44.4
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 8.2e-170 601.7 818 43.6
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 1.8e-169 600.5 811 41.9
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 2.4e-169 600.1 811 41.6
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 3.1e-169 599.7 801 44.2
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 4.1e-169 599.4 810 42.7
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 4.1e-169 599.4 806 42.9
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 5.3e-169 599.0 810 43.5
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 2.0e-168 597.0 807 43.2
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 3.4e-168 596.3 807 43.1
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 3.4e-168 596.3 807 43.1
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 2.2e-167 593.6 807 43.1
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 2.2e-167 593.6 788 42.4
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 2.9e-167 593.2 824 42.5
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 1.9e-166 590.5 797 42.3
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 4.6e-165 585.9 821 42.8
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 6.7e-164 582.0 821 42.6
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 1.1e-163 581.3 872 40.9
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 2.5e-163 580.1 812 42.5
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 9.7e-163 578.2 805 41.9
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 2.8e-162 576.6 820 43.0
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 1.8e-161 573.9 794 41.6
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 9.1e-161 571.6 870 40.0
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 1.2e-160 571.2 814 41.3
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 1.0e-159 568.2 800 42.6
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 1.7e-159 567.4 817 41.5
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 2.2e-159 567.0 807 40.4
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 2.9e-159 566.6 818 40.6
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 6.5e-159 565.5 793 42.4
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 6.5e-159 565.5 864 38.5
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 4.2e-158 562.8 814 40.9
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 3.6e-157 559.7 812 40.8
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 2.3e-156 557.0 821 39.8
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 2.3e-156 557.0 821 39.8
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 3.9e-156 556.2 797 42.2
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 2.0e-155 553.9 816 40.1
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 2.2e-154 550.4 726 44.9
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 3.7e-154 549.7 805 40.0
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 8.2e-154 548.5 804 39.1
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 1.4e-153 547.7 625 47.0
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 4.5e-152 542.7 784 42.1
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 1.7e-151 540.8 783 41.9
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 9.4e-150 535.0 773 41.1
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 1.4e-148 531.2 809 38.8
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 1.5e-147 527.7 784 40.9
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 8.2e-146 521.9 804 38.7
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 1.8e-145 520.8 629 45.0
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 1.2e-144 518.1 776 40.7
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 2.6e-144 516.9 847 39.9
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 5.2e-132 476.1 686 40.8
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 1.6e-125 454.5 790 36.8
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 2.8e-122 443.7 609 42.5
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 2.5e-118 430.6 669 39.9
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 4.0e-116 423.3 576 43.4
Pp3c19_23280 Physcomitrium patens HOM05D006677 ORTHO05D008348 1.1e-105 388.7 874 33.1
AagrBONN_evm.TU.Sc2ySwM_228.2440 Anthoceros agrestis HOM05D006677 ORTHO05D008348 2.9e-90 337.4 871 31.5
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 1.7e-87 328.2 803 31.5
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 2.7e-80 304.3 778 30.3
TPR.G36090 Trifolium pratense HOM05D006677 ORTHO05D008348 3.8e-58 230.7 386 38.3
TAR365G0661 Trochodendron aralioides HOM05D006677 ORTHO05D008348 9.3e-57 226.1 238 52.1
GSVIVG01006276001 Vitis vinifera HOM05D006677 ORTHO05D008348 6.0e-56 223.4 238 47.5
DCAR_004979 Daucus carota HOM05D006677 ORTHO05D008348 3.9e-55 220.7 310 41.3
DCAR_004986 Daucus carota HOM05D006677 ORTHO05D008348 5.1e-55 220.3 309 40.8
TPR.G37689 Trifolium pratense HOM05D006677 ORTHO05D008348 5.1e-55 220.3 321 40.5
GSVIVG01006275001 Vitis vinifera HOM05D006677 ORTHO05D000005 6.3e-45 186.8 273 42.1
Cpa.g.sc3684.1 Carica papaya HOM05D006677 ORTHO05D008348 8.2e-45 186.4 283 38.9
TAR629G1120 Trochodendron aralioides HOM05D006677 ORTHO05D008348 3.1e-36 157.9 137 55.5
CBR_g16835 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-35 155.6 1001 23.5
TAR633G2042 Trochodendron aralioides HOM05D006677 ORTHO05D008348 3.8e-34 151.0 152 54.6
Os10g0560500 Oryza sativa ssp. japonica HOM05D006677 ORTHO05D008348 6.5e-34 150.2 261 40.6
DCAR_004983 Daucus carota HOM05D006677 ORTHO05D008348 1.4e-28 132.5 223 36.8
DCAR_004974 Daucus carota HOM05D006677 ORTHO05D008348 2.4e-28 131.7 227 37.0
DCAR_004984 Daucus carota HOM05D006677 ORTHO05D008348 3.8e-18 97.8 89 53.9
DCAR_004972 Daucus carota HOM05D006677 ORTHO05D008348 1.5e-14 85.9 117 44.4
Cre06.g278126 Chlamydomonas reinhardtii HOM05D006677 ORTHO05D008348 4.4e-14 84.3 141 35.5
CAN.G26.36 Capsicum annuum HOM05D006677 ORTHO05D008348 1.7e-13 82.4 166 33.7
MCO13G224 Micromonas commoda HOM05D006677 ORTHO05D008348 1.2e-11 76.3 132 31.8
TPR.G36480 Trifolium pratense HOM05D004733 ORTHO05D008348 1.4e-07 62.8 53 50.9
ECA233G4789 Erigeron canadensis HOM05D006677 ORTHO05D008348 5.7e-06 57.4 53 52.8


User provided reference genes

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