Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 1.9e-210 735.7 406 100.0
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 2.4e-133 479.6 410 62.7
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 2.1e-132 476.5 418 62.2
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 1.1e-130 470.7 418 60.3
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 2.1e-129 466.5 409 61.9
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 4.9e-126 455.3 410 60.0
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 4.9e-126 455.3 409 61.4
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 1.1e-125 454.1 410 60.5
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 4.2e-125 452.2 408 59.3
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 4.2e-125 452.2 410 60.0
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 3.5e-124 449.1 410 59.3
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 1.1e-122 444.1 416 58.7
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.5e-122 443.7 411 61.3
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 1.9e-122 443.4 410 60.0
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 1.6e-121 440.3 408 58.6
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 1.6e-121 440.3 438 56.2
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 2.1e-121 439.9 410 58.3
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 3.7e-121 439.1 410 58.8
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 6.2e-121 438.3 410 60.2
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 8.2e-121 438.0 410 58.5
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 1.1e-120 437.6 412 57.5
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 1.4e-120 437.2 413 57.4
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 6.9e-120 434.9 410 58.8
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 9.0e-120 434.5 410 58.0
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 1.2e-119 434.1 406 56.9
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 1.0e-118 431.0 410 57.1
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 1.7e-118 430.3 401 59.1
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 2.9e-118 429.5 413 57.6
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 1.9e-117 426.8 410 59.8
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 4.2e-117 425.6 416 56.7
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 5.5e-117 425.2 410 57.8
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 7.1e-117 424.9 413 57.4
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 1.6e-116 423.7 407 57.5
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 1.6e-116 423.7 412 56.3
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 1.6e-116 423.7 412 57.0
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 3.5e-116 422.5 407 57.5
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 4.6e-116 422.2 401 57.1
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 7.9e-116 421.4 415 56.9
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.0e-115 421.0 422 58.1
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 1.8e-115 420.2 411 55.7
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 1.8e-115 420.2 410 57.3
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 6.7e-115 418.3 411 57.9
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 8.7e-115 417.9 413 56.7
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 8.7e-115 417.9 410 57.3
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 1.5e-114 417.2 412 56.3
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 1.5e-114 417.2 413 55.4
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 1.9e-114 416.8 433 55.0
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 1.9e-114 416.8 417 59.0
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 2.5e-114 416.4 414 54.3
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 4.3e-114 415.6 418 56.0
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 4.3e-114 415.6 410 55.6
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 7.4e-114 414.8 412 55.3
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.3e-113 414.1 426 54.2
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 2.2e-113 413.3 412 56.1
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 3.7e-113 412.5 410 55.9
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 6.3e-113 411.8 418 56.2
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 6.3e-113 411.8 418 54.8
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 1.1e-112 411.0 410 56.3
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 1.1e-112 411.0 418 55.0
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 1.4e-112 410.6 416 55.5
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 1.8e-112 410.2 418 55.5
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 1.8e-112 410.2 418 55.5
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 2.4e-112 409.8 410 54.6
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 3.1e-112 409.5 413 55.7
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 3.1e-112 409.5 410 56.6
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 4.1e-112 409.1 418 55.0
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 6.9e-112 408.3 414 53.1
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 9.0e-112 407.9 411 55.5
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 1.5e-111 407.1 410 54.1
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 2.6e-111 406.4 438 52.5
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 2.6e-111 406.4 408 55.9
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 4.5e-111 405.6 413 55.2
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 7.7e-111 404.8 418 55.0
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 7.7e-111 404.8 414 54.1
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 1.0e-110 404.4 411 55.2
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 1.0e-110 404.4 406 56.4
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 1.0e-110 404.4 417 53.5
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 1.0e-110 404.4 410 54.6
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 1.7e-110 403.7 411 55.0
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 1.7e-110 403.7 411 55.0
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 3.8e-110 402.5 418 54.8
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 6.5e-110 401.7 444 51.8
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 6.5e-110 401.7 418 54.3
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 8.5e-110 401.4 395 56.2
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.1e-109 401.0 418 54.1
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 7.2e-109 398.3 465 50.8
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 1.2e-108 397.5 419 54.9
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 2.1e-108 396.7 463 50.1
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 1.4e-107 394.0 413 54.0
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 1.8e-107 393.7 393 57.3
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 5.1e-107 392.1 436 51.8
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 2.5e-106 389.8 411 53.8
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 3.7e-105 386.0 463 50.3
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.4e-104 383.3 447 50.3
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 3.6e-100 369.4 418 51.0
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 1.8e-99 367.1 355 57.5
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 2.4e-96 356.7 493 45.6
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 9.1e-96 354.8 405 52.1
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 1.5e-95 354.0 410 49.8
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.0e-95 353.6 418 49.8
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 6.1e-92 342.0 317 57.7
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 4.4e-90 335.9 411 49.1
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 1.7e-89 334.0 298 61.7
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 2.2e-89 333.6 410 49.0
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 2.6e-87 326.6 299 58.9
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 1.3e-70 271.2 432 40.7
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 6.8e-67 258.8 254 54.7
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 4.5e-63 246.1 460 40.2
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.1e-48 198.4 176 57.4
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 9.2e-48 195.3 176 56.8
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.7e-47 193.7 176 56.8
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 3.5e-47 193.4 376 35.9
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 1.2e-42 178.3 142 59.9
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 3.2e-40 170.2 176 51.1
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.2e-34 151.8 161 50.9
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.1e-32 145.2 124 58.1
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 3.0e-30 137.1 127 56.7
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 8.4e-25 119.0 113 59.3
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 1.4e-19 101.7 111 49.5
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 5.8e-18 96.3 95 60.0
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 6.4e-17 92.8 121 46.3
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 5.4e-16 89.7 124 44.4
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 1.3e-14 85.1 90 55.6
GSVIVG01006058001 Vitis vinifera HOM05D002866 ORTHO05D441252 6.7e-06 56.2 30 83.3


User provided reference genes

Program Settings