Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0057G071 Amborella trichopoda HOM05D007049 ORTHO05D008896 1.3e-49 199.5 107 100.0
Rhsim08G0116100 Rhododendron simsii HOM05D007049 ORTHO05D008896 8.7e-22 107.1 86 61.6
CSS0000179 Camellia sinensis var. sinensis HOM05D007049 ORTHO05D008896 1.5e-21 106.3 86 59.3
SalBow7G2968 Salvia bowleyana HOM05D007049 ORTHO05D008896 3.3e-21 105.1 86 60.5
Nn5g27287 Nelumbo nucifera HOM05D007049 ORTHO05D008896 4.3e-21 104.8 81 61.7
MBI13_g30327_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 1.3e-20 103.2 79 63.3
MBI13_g15314_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 1.6e-20 102.8 79 63.3
Hma1.2p1_0400F.1_g144580 Hydrangea macrophylla HOM05D007049 ORTHO05D008896 2.8e-20 102.1 86 58.1
TAR624G0348 Trochodendron aralioides HOM05D007049 ORTHO05D008896 2.8e-20 102.1 87 58.6
TAR624G1340 Trochodendron aralioides HOM05D007049 ORTHO05D008896 2.8e-20 102.1 87 58.6
TWI12G1157 Tripterygium wilfordii HOM05D007049 ORTHO05D008896 3.7e-20 101.7 86 58.1
CAN.G4100.1 Capsicum annuum HOM05D007049 ORTHO05D008896 4.8e-20 101.3 78 65.4
CAN.G608.33 Capsicum annuum HOM05D007049 ORTHO05D008896 4.8e-20 101.3 78 65.4
COL.COLO4_06913 Corchorus olitorius HOM05D007049 ORTHO05D008896 6.2e-20 100.9 86 59.3
Sed0002937 Sechium edule HOM05D007049 ORTHO05D008896 6.2e-20 100.9 86 59.3
Gohir.A13G115800 Gossypium hirsutum HOM05D007049 ORTHO05D008896 8.1e-20 100.5 85 57.6
Eucgr.F02581 Eucalyptus grandis HOM05D007049 ORTHO05D008896 1.1e-19 100.1 90 55.6
Oeu023195.1 Olea europaea HOM05D007049 ORTHO05D008896 1.1e-19 100.1 86 58.1
Sabra01G0012500 Salix brachista HOM05D007049 ORTHO05D008896 1.1e-19 100.1 87 57.5
EL10Ac7g16149 Beta vulgaris HOM05D007049 ORTHO05D008896 1.4e-19 99.8 90 54.4
Cc10_g08690 Coffea canephora HOM05D007049 ORTHO05D008896 1.4e-19 99.8 86 59.3
FAN08G2573 Fragaria x ananassa HOM05D007049 ORTHO05D008896 1.4e-19 99.8 78 62.8
Thecc.08G177900 Theobroma cacao HOM05D007049 ORTHO05D008896 1.4e-19 99.8 86 58.1
Migut.C01376 Erythranthe guttata HOM05D007049 ORTHO05D008896 1.8e-19 99.4 86 57.0
Gohir.D13G119000 Gossypium hirsutum HOM05D007049 ORTHO05D008896 1.8e-19 99.4 85 57.6
Gorai.013G133400 Gossypium raimondii HOM05D007049 ORTHO05D008896 1.8e-19 99.4 85 57.6
Nitab4.5_0000213g0160 Nicotiana tabacum HOM05D007049 ORTHO05D008896 1.8e-19 99.4 86 58.1
Os08g0278600 Oryza sativa ssp. japonica HOM05D007049 ORTHO05D008896 1.8e-19 99.4 83 60.2
Nitab4.5_0000398g0030 Nicotiana tabacum HOM05D007049 ORTHO05D008896 2.4e-19 99.0 86 58.1
QL04p010524 Quercus lobata HOM05D007049 ORTHO05D008896 2.4e-19 99.0 86 55.8
Peaxi162Scf00078g00061 Petunia axillaris HOM05D007049 ORTHO05D008896 3.1e-19 98.6 78 62.8
FAN18G1167 Fragaria x ananassa HOM05D007049 ORTHO05D008896 4.0e-19 98.2 78 61.5
FAN18G2563 Fragaria x ananassa HOM05D007049 ORTHO05D008896 4.0e-19 98.2 78 61.5
Solyc09g007070.1 Solanum lycopersicum HOM05D007049 ORTHO05D008896 4.0e-19 98.2 80 61.2
Sopen09g001930 Solanum pennellii HOM05D007049 ORTHO05D008896 4.0e-19 98.2 80 61.2
PGSC0003DMG401002024 Solanum tuberosum HOM05D007049 ORTHO05D008896 4.0e-19 98.2 78 62.8
Cpa.g.sc19.285 Carica papaya HOM05D007049 ORTHO05D008896 5.3e-19 97.8 86 57.0
CiPaw.15G066500 Carya illinoinensis HOM05D007049 ORTHO05D008896 5.3e-19 97.8 86 58.1
Ciclev10023082m.g Citrus clementina HOM05D007049 ORTHO05D008896 9.0e-19 97.1 87 58.6
Duzib177G1207 Durio zibethinus HOM05D007049 ORTHO05D008896 9.0e-19 97.1 85 55.3
Glyma.11G013800 Glycine max HOM05D007049 ORTHO05D008896 1.5e-18 96.3 87 56.3
RcHm_v2.0_Chr7g0212501 Rosa chinensis HOM05D007049 ORTHO05D008896 1.5e-18 96.3 86 55.8
RcHm_v2.0_Chr7g0212551 Rosa chinensis HOM05D007049 ORTHO05D008896 1.5e-18 96.3 86 55.8
PSO017G7166 Papaver somniferum HOM05D007049 ORTHO05D008896 2.0e-18 95.9 76 64.5
Phvul.002G036400 Phaseolus vulgaris HOM05D007049 ORTHO05D008896 2.0e-18 95.9 87 57.5
Prupe.8G009200 Prunus persica HOM05D007049 ORTHO05D008896 2.0e-18 95.9 86 55.8
PGR042G0623 Punica granatum HOM05D007049 ORTHO05D008896 2.6e-18 95.5 77 61.0
AUR62022356 Chenopodium quinoa HOM05D007049 ORTHO05D008896 3.4e-18 95.1 87 54.0
AUR62034352 Chenopodium quinoa HOM05D007049 ORTHO05D008896 3.4e-18 95.1 87 54.0
Ca_24471_v3 Cicer arietinum L. HOM05D007049 ORTHO05D008896 3.4e-18 95.1 87 56.3
Psat2g187280 Pisum sativum HOM05D007049 ORTHO05D008896 3.4e-18 95.1 86 60.5
Psat7g180160 Pisum sativum HOM05D007049 ORTHO05D008896 4.5e-18 94.7 86 60.5
RcHm_v2.0_Chr7g0212661 Rosa chinensis HOM05D007049 ORTHO05D008896 4.5e-18 94.7 86 54.7
VMungo1215G2220 Vigna mungo HOM05D007049 ORTHO05D008896 4.5e-18 94.7 87 56.3
ClCG08G001090 Citrullus lanatus HOM05D007049 ORTHO05D008896 5.8e-18 94.4 82 56.1
DCAR_006853 Daucus carota HOM05D007049 ORTHO05D008896 5.8e-18 94.4 86 54.7
Sc20g0003280 Simmondsia chinensis HOM05D007049 ORTHO05D008896 5.8e-18 94.4 80 56.2
TPR.G37942 Trifolium pratense HOM05D007049 ORTHO05D008896 5.8e-18 94.4 86 57.0
MELO3C022175.2 Cucumis melo HOM05D007049 ORTHO05D008896 7.6e-18 94.0 80 56.2
CsaV3_5G039970 Cucumis sativus L. HOM05D007049 ORTHO05D008896 7.6e-18 94.0 80 56.2
DCAR_017595 Daucus carota HOM05D007049 ORTHO05D008896 7.6e-18 94.0 86 54.7
Medtr5g008340 Medicago truncatula HOM05D007049 ORTHO05D008896 7.6e-18 94.0 86 58.1
ECA248G1776 Erigeron canadensis HOM05D007049 ORTHO05D008896 9.9e-18 93.6 85 52.9
Lalb_Chr03g0041921 Lupinus albus HOM05D007049 ORTHO05D008896 9.9e-18 93.6 79 58.2
BcaC02g07431 Brassica carinata HOM05D007049 ORTHO05D008896 1.3e-17 93.2 79 59.5
C04p67530 Brassica napus HOM05D007049 ORTHO05D008896 1.3e-17 93.2 79 59.5
Ah.05g168610 Amaranthus hybridus HOM05D007049 ORTHO05D008896 1.7e-17 92.8 87 54.0
Cfa019294 Carpinus fangiana HOM05D007049 ORTHO05D008896 1.7e-17 92.8 86 55.8
HanXRQChr04g0114811 Helianthus annuus HOM05D007049 ORTHO05D008896 1.7e-17 92.8 85 54.1
Zm00001eb026180 Zea mays HOM05D007049 ORTHO05D008896 1.7e-17 92.8 82 56.1
Aa31LG5G19930 Aethionema arabicum HOM05D007049 ORTHO05D008896 2.2e-17 92.4 87 57.5
arahy.Tifrunner.gnm1.ann1.6H88WF Arachis hypogaea HOM05D007049 ORTHO05D008896 2.2e-17 92.4 79 55.7
MD10G1006000 Malus domestica HOM05D007049 ORTHO05D008896 2.2e-17 92.4 77 58.4
Psat7g180120 Pisum sativum HOM05D007049 ORTHO05D008896 2.2e-17 92.4 86 59.3
THA.LOC104824284 Tarenaya hassleriana HOM05D007049 ORTHO05D008896 2.2e-17 92.4 79 57.0
LjContig00222g0016429 Lotus japonicus HOM05D007049 ORTHO05D008896 3.8e-17 91.7 79 57.0
Prupe.8G008400 Prunus persica HOM05D007049 ORTHO05D008896 3.8e-17 91.7 86 54.7
Sabra01G0012700 Salix brachista HOM05D007049 ORTHO05D008896 3.8e-17 91.7 75 58.7
HPP92_017350 Vanilla planifolia HOM05D007049 ORTHO05D008896 3.8e-17 91.7 85 60.0
Carub.0004s2178 Capsella rubella HOM05D007049 ORTHO05D008896 8.4e-17 90.5 79 57.0
CARHR134570 Cardamine hirsuta HOM05D007049 ORTHO05D008896 8.4e-17 90.5 79 57.0
Thhalv10017481m.g Eutrema salsugineum HOM05D007049 ORTHO05D008896 8.4e-17 90.5 79 58.2
HanXRQChr10g0289041 Helianthus annuus HOM05D007049 ORTHO05D008896 8.4e-17 90.5 85 52.9
Psat7g180080 Pisum sativum HOM05D007049 ORTHO05D008896 8.4e-17 90.5 86 58.1
CANSAT25G3584 Cannabis sativa HOM05D007049 ORTHO05D008896 1.4e-16 89.7 77 58.4
Aqoxy3G02546 Aquilegia oxysepala HOM05D007049 ORTHO05D008896 1.9e-16 89.4 82 54.9
RcHm_v2.0_Chr6g0251481 Rosa chinensis HOM05D007049 ORTHO05D008896 1.9e-16 89.4 83 54.2
AL4G37190 Arabidopsis lyrata HOM05D007049 ORTHO05D008896 2.4e-16 89.0 79 55.7
A04p30310 Brassica napus HOM05D007049 ORTHO05D008896 2.4e-16 89.0 80 60.0
unitig_46.g17984 Utricularia gibba HOM05D007049 ORTHO05D008896 2.4e-16 89.0 88 55.7
BcaB06g29104 Brassica carinata HOM05D007049 ORTHO05D008896 3.2e-16 88.6 80 58.8
BolC4t28250H Brassica oleracea HOM05D007049 ORTHO05D008896 3.2e-16 88.6 80 58.8
Prupe.8G008800 Prunus persica HOM05D007049 ORTHO05D008896 4.2e-16 88.2 81 56.8
Sp4g21990 Schrenkiella parvula HOM05D007049 ORTHO05D008896 4.2e-16 88.2 79 58.2
BraA04t18476Z Brassica rapa HOM05D007049 ORTHO05D008896 7.1e-16 87.4 80 57.5
FAN04G0010 Fragaria x ananassa HOM05D007049 ORTHO05D008896 7.1e-16 87.4 70 61.4
AT2G39725 Arabidopsis thaliana HOM05D007049 ORTHO05D008896 9.3e-16 87.0 79 55.7
arahy.Tifrunner.gnm1.ann1.CT79FY Arachis hypogaea HOM05D007049 ORTHO05D008896 9.3e-16 87.0 76 53.9
Psat7g195680 Pisum sativum HOM05D007049 ORTHO05D008896 1.3e-14 83.2 86 55.8
Pp3c4_6780 Physcomitrium patens HOM05D007049 ORTHO05D008896 1.8e-14 82.8 80 55.0
SMO353G0203 Selaginella moellendorffii HOM05D007049 ORTHO05D008896 2.3e-14 82.4 69 59.4
Mapoly0004s0187 Marchantia polymorpha HOM05D007049 ORTHO05D008896 1.1e-13 80.1 79 50.6
SGA_v2.0_scaffold118G32610 Striga asiatica HOM05D007049 ORTHO05D008896 3.3e-13 78.6 79 53.2
FAN13G1882 Fragaria x ananassa HOM05D007049 ORTHO05D008896 2.8e-12 75.5 66 56.1
Potri.001G018100 Populus trichocarpa HOM05D007049 ORTHO05D008896 4.8e-12 74.7 68 57.4
SHI21473 Sapria himalayana HOM05D000105 ORTHO05D000023 6.2e-12 74.3 63 60.3
Manes.01G011600 Manihot esculenta HOM05D007049 ORTHO05D008896 1.1e-11 73.6 69 55.1
Prupe.8G009100 Prunus persica HOM05D007049 ORTHO05D008896 5.3e-11 71.2 78 48.7
MCO05G024 Micromonas commoda HOM05D007049 ORTHO05D008896 1.3e-09 66.6 78 44.9
MD05G1008200 Malus domestica HOM05D007049 ORTHO05D008896 2.7e-07 58.9 57 52.6


User provided reference genes

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