Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 4.9e-287 990.3 464 100.0
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 5.3e-241 837.4 462 82.5
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 1.5e-240 835.9 462 81.8
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 1.1e-238 829.7 462 82.3
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 3.2e-238 828.2 462 81.6
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 7.1e-238 827.0 459 81.5
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 7.1e-238 827.0 462 81.0
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 2.7e-237 825.1 462 81.4
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 3.5e-237 824.7 474 78.9
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.9e-237 823.5 462 81.0
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 1.0e-236 823.2 462 81.0
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 1.3e-236 822.8 462 81.0
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 3.0e-236 821.6 462 80.5
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 1.5e-235 819.3 462 79.2
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 1.5e-235 819.3 462 80.3
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 1.9e-235 818.9 462 80.3
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 3.3e-235 818.1 462 80.7
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 4.3e-235 817.8 462 80.5
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 1.3e-234 816.2 462 80.5
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 1.6e-234 815.8 462 80.3
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 2.8e-234 815.1 462 80.3
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 2.8e-234 815.1 462 80.1
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 2.8e-234 815.1 462 80.5
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 3.7e-234 814.7 462 79.9
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 6.2e-234 813.9 463 79.9
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 6.2e-234 813.9 462 79.0
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 3.1e-233 811.6 462 78.4
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 3.1e-233 811.6 462 79.9
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 4.0e-233 811.2 462 80.7
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 9.0e-233 810.1 462 79.2
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 9.0e-233 810.1 461 79.8
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 1.2e-232 809.7 462 78.4
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.5e-232 809.3 461 80.0
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 2.6e-232 808.5 461 80.0
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 2.6e-232 808.5 461 80.0
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 5.8e-232 807.4 462 78.6
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.0e-231 806.6 462 78.8
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 1.3e-231 806.2 462 79.2
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 1.7e-231 805.8 463 78.6
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 1.7e-231 805.8 463 79.5
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.2e-231 805.4 461 79.8
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 6.5e-231 803.9 462 79.7
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 5.5e-230 800.8 462 78.4
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 7.9e-229 797.0 463 78.4
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 1.8e-228 795.8 462 78.1
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 1.8e-228 795.8 479 75.8
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 3.0e-228 795.0 462 77.9
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 3.0e-228 795.0 462 77.9
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 3.9e-228 794.7 462 77.9
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 5.1e-228 794.3 462 77.5
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 8.7e-228 793.5 468 76.9
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 1.5e-227 792.7 460 78.3
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 4.3e-227 791.2 462 77.7
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 5.7e-227 790.8 462 76.6
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 6.9e-225 783.9 460 77.4
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 1.2e-224 783.1 460 77.4
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 1.5e-224 782.7 466 77.3
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 3.4e-224 781.6 462 75.5
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 7.7e-224 780.4 459 75.8
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 1.7e-223 779.2 461 76.6
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 3.8e-223 778.1 462 77.1
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.1e-222 776.5 462 76.8
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 1.9e-222 775.8 447 78.3
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 4.2e-222 774.6 462 76.4
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 2.1e-221 772.3 462 76.2
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 2.1e-221 772.3 462 76.4
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 1.8e-220 769.2 462 75.8
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 2.3e-220 768.8 462 76.2
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 5.1e-220 767.7 462 76.0
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 3.3e-219 765.0 462 75.5
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 2.2e-218 762.3 462 76.2
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 4.8e-218 761.1 462 75.3
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 6.3e-218 760.8 462 76.0
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 8.2e-218 760.4 462 74.5
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 1.2e-216 756.5 490 71.4
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 1.0e-215 753.4 462 73.8
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 1.1e-214 750.0 462 74.5
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 2.5e-214 748.8 462 76.0
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 2.5e-214 748.8 462 74.5
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 2.7e-213 745.3 462 74.5
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 4.7e-213 744.6 500 69.8
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.1e-209 733.4 463 72.1
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 7.2e-198 694.1 394 80.5
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 6.3e-194 681.0 460 67.6
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 1.8e-193 679.5 501 64.5
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 3.5e-192 675.2 463 67.6
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.9e-190 669.5 462 64.1
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 5.5e-190 667.9 462 64.5
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.0e-183 647.1 469 62.9
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 4.7e-181 638.3 461 66.2
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 7.0e-177 624.4 345 82.6
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 3.5e-176 622.1 346 82.7
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 3.5e-176 622.1 346 82.7
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 2.3e-175 619.4 469 59.5
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 5.6e-174 614.8 342 82.7
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 9.5e-174 614.0 343 81.3
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.8e-173 612.5 343 81.6
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 1.3e-170 603.6 327 84.7
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.7e-170 602.1 342 81.6
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.1e-166 590.5 341 78.6
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 2.0e-163 579.7 342 79.2
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 2.6e-163 579.3 341 77.1
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 6.4e-162 574.7 451 56.8
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 9.2e-161 570.9 310 83.5
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.1e-148 530.8 301 80.4
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 5.8e-147 525.0 341 72.1
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.2e-144 517.3 295 79.0
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 4.6e-144 515.4 297 80.1
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 4.8e-141 505.4 379 61.5
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 4.8e-141 505.4 277 82.3
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.6e-136 490.3 293 76.8
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 3.5e-136 489.2 280 80.0
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 7.9e-104 381.7 454 40.7
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 7.9e-96 355.1 491 36.5
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.7e-66 257.7 157 72.6
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.3e-53 214.9 110 87.3
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.3e-53 214.9 110 87.3
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 1.3e-53 214.9 185 57.3
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.7e-53 214.5 110 87.3
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 5.2e-39 166.4 100 77.0
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 5.6e-09 66.6 40 72.5


User provided reference genes

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