Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 1.7e-207 725.7 348 100.0
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 2.8e-122 442.6 306 71.2
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 2.8e-122 442.6 303 71.0
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 2.8e-122 442.6 304 70.4
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 6.3e-122 441.4 307 69.4
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 2.7e-120 436.0 312 69.6
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 7.7e-120 434.5 303 70.0
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 2.2e-119 433.0 302 69.2
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 2.9e-119 432.6 299 70.2
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 5.0e-119 431.8 313 69.3
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 6.5e-119 431.4 299 70.2
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 8.5e-119 431.0 302 70.2
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 2.5e-118 429.5 303 69.0
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 5.5e-118 428.3 305 69.8
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 5.5e-118 428.3 303 70.0
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 7.2e-118 427.9 303 69.6
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 7.2e-118 427.9 303 69.6
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 9.4e-118 427.6 308 68.8
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 9.4e-118 427.6 308 68.8
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 1.2e-117 427.2 308 68.2
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 1.6e-117 426.8 307 68.4
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 2.1e-117 426.4 307 68.4
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 4.7e-117 425.2 307 68.4
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 4.7e-117 425.2 303 69.3
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 6.1e-117 424.9 306 68.6
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 1.0e-116 424.1 303 69.0
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 1.0e-116 424.1 301 69.1
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 1.8e-116 423.3 310 66.8
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 2.3e-116 422.9 303 69.0
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 3.0e-116 422.5 303 69.0
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 4.0e-116 422.2 301 69.1
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 5.2e-116 421.8 304 68.4
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 6.8e-116 421.4 306 69.0
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 8.8e-116 421.0 303 67.3
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 2.6e-115 419.5 312 67.3
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 2.6e-115 419.5 307 65.8
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 3.4e-115 419.1 305 68.2
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 3.4e-115 419.1 305 66.2
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 4.4e-115 418.7 306 69.0
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 4.4e-115 418.7 307 66.1
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 9.8e-115 417.5 296 68.2
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 2.2e-114 416.4 289 70.9
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 6.3e-114 414.8 307 64.8
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 6.3e-114 414.8 348 60.9
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 8.3e-114 414.5 349 60.7
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 8.3e-114 414.5 303 67.0
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 1.1e-113 414.1 299 67.2
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.8e-113 413.3 311 65.9
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 2.4e-113 412.9 297 69.0
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 3.1e-113 412.5 303 67.0
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 4.1e-113 412.1 307 67.4
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 4.1e-113 412.1 307 64.5
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 4.1e-113 412.1 303 66.0
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 7.0e-113 411.4 311 65.6
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 2.7e-112 409.5 304 66.4
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 3.5e-112 409.1 304 66.4
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 5.9e-112 408.3 307 64.8
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 5.9e-112 408.3 303 65.7
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.3e-111 406.4 319 63.0
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 3.8e-111 405.6 302 66.6
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 1.1e-110 404.1 278 71.9
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 1.1e-110 404.1 303 67.0
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 1.9e-110 403.3 299 65.6
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 1.9e-110 403.3 299 65.9
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.5e-110 402.9 319 62.7
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 5.6e-110 401.7 304 65.8
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 9.5e-110 401.0 307 65.5
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 1.2e-109 400.6 299 66.2
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 1.2e-109 400.6 278 71.6
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.1e-109 399.8 311 63.7
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 2.8e-109 399.4 292 67.8
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 6.1e-109 398.3 278 71.6
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 2.3e-108 396.4 299 65.6
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 8.9e-108 394.4 297 66.0
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 1.5e-107 393.7 307 63.5
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.2e-106 389.8 342 58.5
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 3.7e-106 389.0 328 62.2
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 7.0e-105 384.8 278 68.3
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 2.3e-103 379.8 307 61.6
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 3.9e-103 379.0 285 66.3
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 3.9e-103 379.0 337 59.1
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 3.3e-102 375.9 278 68.0
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 3.6e-101 372.5 262 69.5
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.4e-100 370.5 306 60.1
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 2.3e-100 369.8 265 69.4
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 3.1e-100 369.4 328 59.1
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 3.1e-100 369.4 328 59.1
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 4.0e-100 369.0 303 63.0
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 4.4e-99 365.5 359 54.0
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 7.5e-99 364.8 336 58.3
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 1.9e-97 360.1 261 68.6
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 5.4e-97 358.6 337 55.8
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 7.8e-96 354.8 263 68.1
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 7.8e-96 354.8 303 58.4
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 2.5e-94 349.7 299 55.2
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 5.6e-94 348.6 261 65.9
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 7.3e-94 348.2 282 61.7
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 3.6e-93 345.9 303 59.7
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 8.1e-93 344.7 352 53.4
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 2.0e-91 340.1 260 65.8
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 2.2e-90 336.7 304 58.9
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 1.4e-89 334.0 292 54.1
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 5.4e-89 332.0 302 58.3
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 3.5e-88 329.3 309 52.4
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 6.6e-87 325.1 242 66.9
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 1.1e-84 317.8 301 52.2
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 6.8e-84 315.1 307 50.5
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 2.6e-83 313.2 261 62.1
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 3.2e-81 306.2 245 63.7
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 3.2e-81 306.2 213 70.4
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 7.1e-81 305.1 224 67.4
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 1.2e-77 294.3 229 64.6
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 4.9e-74 282.3 195 69.2
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 1.9e-73 280.4 253 58.9
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 3.6e-69 266.2 221 63.3
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 1.4e-60 237.7 234 55.1
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 1.4e-57 227.6 356 38.5
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 3.7e-45 186.4 133 67.7
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 6.3e-45 185.7 123 70.7
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 1.5e-43 181.0 129 68.2
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 7.4e-38 162.2 154 54.5
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 8.5e-34 148.7 310 33.9
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 1.1e-30 138.3 273 35.2
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 1.7e-29 134.4 107 58.9
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.3e-21 108.2 84 64.3
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 5.0e-18 96.3 96 50.0
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 3.7e-13 80.1 46 76.1
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 5.9e-11 72.8 56 66.1


User provided reference genes

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