Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0057G021 Amborella trichopoda HOM05D006946 ORTHO05D008634 7.5e-204 713.8 394 100.0
TAR629G0179 Trochodendron aralioides HOM05D006946 ORTHO05D008634 2.9e-83 313.2 354 49.2
Haze_02851 Corylus avellana HOM05D006946 ORTHO05D008634 5.0e-83 312.4 342 49.1
Aqoxy5G04137 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 4.2e-82 309.3 349 48.1
Aqoxy1G01627 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 9.5e-82 308.1 349 48.1
vmacro13499 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 1.6e-81 307.4 353 49.3
GSVIVG01018284001 Vitis vinifera HOM05D006946 ORTHO05D008634 3.6e-81 306.2 346 49.1
PGR042G0965 Punica granatum HOM05D006946 ORTHO05D008634 6.1e-81 305.4 350 48.0
Cfa011066 Carpinus fangiana HOM05D006946 ORTHO05D008634 1.0e-80 304.7 349 45.8
COL.COLO4_12403 Corchorus olitorius HOM05D006946 ORTHO05D008634 1.4e-80 304.3 356 47.5
Duzib133G0968 Durio zibethinus HOM05D006946 ORTHO05D008634 5.2e-80 302.4 348 48.6
HanXRQChr13g0423251 Helianthus annuus HOM05D006946 ORTHO05D008634 5.2e-80 302.4 350 47.1
PSO717G0092 Papaver somniferum HOM05D006946 ORTHO05D008634 6.8e-80 302.0 355 47.0
PSO675G1257 Papaver somniferum HOM05D006946 ORTHO05D008634 1.5e-79 300.8 355 47.3
Phvul.010G049700 Phaseolus vulgaris HOM05D006946 ORTHO05D008634 2.0e-79 300.4 351 47.6
Atru.chr5.122 Acer truncatum HOM05D006946 ORTHO05D008634 7.5e-79 298.5 337 47.5
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 9.8e-79 298.1 348 46.6
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 1.3e-78 297.7 328 51.2
QL04p030124 Quercus lobata HOM05D006946 ORTHO05D008634 2.8e-78 296.6 340 47.1
Gorai.008G109100 Gossypium raimondii HOM05D006946 ORTHO05D008634 3.7e-78 296.2 321 49.2
Thecc.01G395400 Theobroma cacao HOM05D006946 ORTHO05D008634 4.9e-78 295.8 348 47.1
CSS0010598 Camellia sinensis var. sinensis HOM05D006946 ORTHO05D008634 1.8e-77 293.9 347 47.6
Glyma.03G110700 Glycine max HOM05D006946 ORTHO05D008634 2.4e-77 293.5 351 46.4
Gohir.D12G100200 Gossypium hirsutum HOM05D006946 ORTHO05D008634 2.4e-77 293.5 303 50.5
Rhsim07G0036200 Rhododendron simsii HOM05D006946 ORTHO05D008634 5.4e-77 292.4 349 47.0
RcHm_v2.0_Chr1g0347961 Rosa chinensis HOM05D006946 ORTHO05D008634 5.4e-77 292.4 288 53.1
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 7.8e-76 288.5 344 44.8
FAN06G0853 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.3e-75 287.7 352 46.3
FvH4_7g10220 Fragaria vesca HOM05D006946 ORTHO05D008634 3.8e-75 286.2 352 46.0
FAN06G0591 Fragaria x ananassa HOM05D006946 ORTHO05D008634 5.0e-75 285.8 352 46.3
VMungo0331G1797 Vigna mungo HOM05D006946 ORTHO05D008634 6.6e-75 285.4 351 45.0
Lj3g0014310 Lotus japonicus HOM05D006946 ORTHO05D008634 1.1e-74 284.6 346 44.5
HPP92_022105 Vanilla planifolia HOM05D006946 ORTHO05D008634 1.1e-74 284.6 350 45.4
FAN10G0617 Fragaria x ananassa HOM05D006946 ORTHO05D008634 3.3e-74 283.1 352 45.7
HPP92_022132 Vanilla planifolia HOM05D006946 ORTHO05D008634 4.3e-74 282.7 342 45.3
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea HOM05D006946 ORTHO05D008634 5.6e-74 282.3 329 45.9
FAN10G1802 Fragaria x ananassa HOM05D006946 ORTHO05D008634 7.3e-74 282.0 352 45.5
Nn1g00836 Nelumbo nucifera HOM05D006946 ORTHO05D008634 1.2e-73 281.2 347 46.1
TPR.G33124 Trifolium pratense HOM05D006946 ORTHO05D008634 2.8e-73 280.0 333 43.8
FAN03G2893 Fragaria x ananassa HOM05D006946 ORTHO05D008634 3.6e-73 279.6 348 45.4
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 4.7e-73 279.3 345 45.5
Sc02g0003120 Simmondsia chinensis HOM05D006946 ORTHO05D008634 6.1e-73 278.9 341 45.2
CANSAT25G1232 Cannabis sativa HOM05D006946 ORTHO05D008634 8.0e-73 278.5 290 49.7
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea HOM05D006946 ORTHO05D008634 2.3e-72 276.9 330 45.5
PGSC0003DMG400025996 Solanum tuberosum HOM05D006946 ORTHO05D008634 3.0e-72 276.6 333 46.5
THA.LOC104817188 Tarenaya hassleriana HOM05D006946 ORTHO05D008634 8.9e-72 275.0 348 44.8
vmacro13524 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 1.2e-71 274.6 413 41.4
Zm00001eb200010 Zea mays HOM05D006946 ORTHO05D008634 2.0e-71 273.9 354 44.1
Medtr8g006950 Medicago truncatula HOM05D006946 ORTHO05D008634 3.4e-71 273.1 342 43.0
Potri.002G138000 Populus trichocarpa HOM05D006946 ORTHO05D008634 3.4e-71 273.1 349 43.0
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 3.4e-71 273.1 333 45.9
Ca_25802_v3 Cicer arietinum L. HOM05D006946 ORTHO05D008634 5.8e-71 272.3 345 43.5
Nitab4.5_0007027g0020 Nicotiana tabacum HOM05D006946 ORTHO05D008634 5.8e-71 272.3 334 47.6
Gohir.A12G097300 Gossypium hirsutum HOM05D006946 ORTHO05D008634 9.8e-71 271.6 260 52.7
TWI14G0580 Tripterygium wilfordii HOM05D006946 ORTHO05D008634 9.8e-71 271.6 339 45.1
Sopen01g036020 Solanum pennellii HOM05D006946 ORTHO05D008634 1.3e-70 271.2 354 43.5
Carub.0005s2704 Capsella rubella HOM05D006946 ORTHO05D008634 4.9e-70 269.2 295 47.1
ECA240G0199 Erigeron canadensis HOM05D006946 ORTHO05D008634 6.4e-70 268.9 359 44.0
Sp5g02920 Schrenkiella parvula HOM05D006946 ORTHO05D008634 1.4e-69 267.7 292 47.3
CAN.G1473.5 Capsicum annuum HOM05D006946 ORTHO05D008634 4.1e-69 266.2 339 47.5
CARHR170620 Cardamine hirsuta HOM05D006946 ORTHO05D008634 4.1e-69 266.2 289 48.8
Lalb_Chr07g0195411 Lupinus albus HOM05D006946 ORTHO05D008634 5.4e-69 265.8 330 44.5
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 4.6e-68 262.7 332 44.3
Thhalv10006060m.g Eutrema salsugineum HOM05D006946 ORTHO05D008634 7.8e-68 261.9 292 46.9
Lsat_1_v5_gn_3_126900 Lactuca sativa HOM05D006946 ORTHO05D008634 3.0e-67 260.0 352 42.6
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 1.5e-66 257.7 344 43.6
Aa31LG10G14420 Aethionema arabicum HOM05D006946 ORTHO05D008634 5.6e-66 255.8 313 44.1
AT3G60300 Arabidopsis thaliana HOM05D006946 ORTHO05D008634 7.3e-66 255.4 300 45.7
Cc02_g25140 Coffea canephora HOM05D006946 ORTHO05D008634 7.3e-66 255.4 350 42.0
Eucgr.E01546 Eucalyptus grandis HOM05D006946 ORTHO05D008634 7.3e-66 255.4 357 42.9
EL10Ac1g00757 Beta vulgaris HOM05D006946 ORTHO05D008634 1.1e-64 251.5 328 42.4
Psat4g224200 Pisum sativum HOM05D006946 ORTHO05D008634 4.0e-64 249.6 341 40.2
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 4.0e-64 249.6 372 42.7
Ah.05g177890 Amaranthus hybridus HOM05D006946 ORTHO05D008634 4.9e-62 242.7 281 43.8
A04p01710 Brassica napus HOM05D006946 ORTHO05D008634 1.2e-60 238.0 288 44.1
C04p32350 Brassica napus HOM05D006946 ORTHO05D008634 1.2e-60 238.0 293 44.0
AUR62023403 Chenopodium quinoa HOM05D006946 ORTHO05D008634 3.9e-59 233.0 319 40.8
AL5G42520 Arabidopsis lyrata HOM05D006946 ORTHO05D008634 1.1e-58 231.5 291 43.6
CiPaw.14G020200 Carya illinoinensis HOM05D006946 ORTHO05D008634 3.3e-58 229.9 209 56.0
BolC4t24784H Brassica oleracea HOM05D006946 ORTHO05D008634 4.3e-58 229.6 311 41.2
BraA04t15895Z Brassica rapa HOM05D006946 ORTHO05D008634 4.0e-56 223.0 306 41.2
Nitab4.5_0000920g0010 Nicotiana tabacum HOM05D006946 ORTHO05D008634 2.2e-54 217.2 362 41.2
Mapoly0040s0025 Marchantia polymorpha HOM05D006946 ORTHO05D008634 6.4e-54 215.7 349 34.4
Sabra02G0106500 Salix brachista HOM05D006946 ORTHO05D008634 1.4e-53 214.5 426 35.2
unitig_750.g28410 Utricularia gibba HOM05D006946 ORTHO05D008634 2.7e-52 210.3 361 38.5
AUR62013748 Chenopodium quinoa HOM05D006946 ORTHO05D008634 2.3e-51 207.2 319 38.2
Actinidia18349 Actinidia chinensis HOM05D006946 ORTHO05D008634 7.3e-50 202.2 252 45.6
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 1.6e-49 201.1 415 35.7
Hund27407 Selenicereus undatus HOM05D006946 ORTHO05D008634 1.5e-47 194.5 263 41.8
Manes.05G055200 Manihot esculenta HOM05D006946 ORTHO05D008634 2.2e-46 190.7 229 44.5
Prupe.2G132200 Prunus persica HOM05D006946 ORTHO05D008634 1.9e-45 187.6 189 51.9
AagrBONN_evm.TU.Sc2ySwM_117.2461 Anthoceros agrestis HOM05D006946 ORTHO05D008634 9.2e-45 185.3 275 34.9
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 2.7e-44 183.7 178 53.4
Dinv43613 Davidia involucrata HOM05D006946 ORTHO05D008634 7.3e-42 175.6 232 44.4
Lj9A556T13 Lonicera japonica HOM05D006946 ORTHO05D008634 2.1e-41 174.1 185 51.4
Medtr5g027110 Medicago truncatula HOM05D006946 ORTHO05D008634 2.4e-40 170.6 230 41.7
PSO017G5203 Papaver somniferum HOM05D006946 ORTHO05D008634 2.6e-39 167.2 197 46.2
SMO352G0084 Selaginella moellendorffii HOM05D006946 ORTHO05D008634 1.7e-35 154.5 158 43.0
CBR_g38735 Chara braunii HOM05D000019 ORTHO05D000353 2.8e-33 147.1 301 29.9
Potri.014G048000 Populus trichocarpa HOM05D006946 ORTHO05D008634 1.3e-27 128.3 219 37.0
MCO13G420 Micromonas commoda HOM05D006946 ORTHO05D008634 3.3e-26 123.6 167 37.1
Cpa.g.sc22.64 Carica papaya HOM05D006946 ORTHO05D008634 2.9e-22 110.5 103 50.5
Cre13.g581801 Chlamydomonas reinhardtii HOM05D006946 ORTHO05D008634 6.9e-16 89.4 236 28.0
MD02G1213400 Malus domestica HOM05D006946 ORTHO05D008634 1.5e-15 88.2 123 41.5
Psat1g142640 Pisum sativum HOM05D006946 ORTHO05D008634 1.4e-13 81.6 91 45.1
SEGI_22555 Sequoiadendron giganteum HOM05D006946 ORTHO05D000002 3.2e-13 80.5 142 37.3
Psat2g026240 Pisum sativum HOM05D006946 ORTHO05D008634 2.1e-12 77.8 96 44.8
Psat1g142600 Pisum sativum HOM05D006946 ORTHO05D008634 1.3e-11 75.1 78 48.7
Cpa.g.sc22.65 Carica papaya HOM05D006946 ORTHO05D008634 1.8e-11 74.7 203 29.6
PRCOL_00003801 Prasinoderma coloniale HOM05D013257 ORTHO05D015313 9.0e-08 62.4 243 25.1
Os11g0565400 Oryza sativa ssp. japonica HOM05D006946 ORTHO05D008634 5.9e-07 59.7 44 61.4
Migut.G01067 Erythranthe guttata HOM05D003486 ORTHO05D004600 1.3e-06 58.5 109 32.1
Hma1.2p1_0072F.1_g038330 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 1.7e-06 58.2 44 56.8
GSVIVG01010755001 Vitis vinifera HOM05D003486 ORTHO05D004600 3.8e-06 57.0 115 31.3
Duzib151G0706 Durio zibethinus HOM05D003486 ORTHO05D004600 6.5e-06 56.2 112 32.1
HPP92_022101 Vanilla planifolia HOM05D006946 ORTHO05D008634 6.5e-06 56.2 44 54.5


User provided reference genes

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