Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 5.9e-197 690.6 342 100.0
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 7.8e-48 195.3 216 53.7
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 2.5e-46 190.3 219 53.4
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 2.5e-46 190.3 216 52.3
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 9.5e-46 188.3 222 50.5
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 8.0e-45 185.3 223 48.9
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 3.0e-44 183.3 219 52.1
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 1.5e-43 181.0 226 47.3
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 3.4e-43 179.9 222 48.6
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 5.8e-43 179.1 224 49.6
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 7.5e-43 178.7 217 49.3
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 9.8e-43 178.3 219 47.5
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 1.3e-42 177.9 229 48.5
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 1.7e-42 177.6 226 50.4
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 1.7e-42 177.6 226 50.4
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 2.9e-42 176.8 227 48.5
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 6.4e-42 175.6 228 49.6
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.1e-41 174.9 228 48.7
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 1.4e-41 174.5 216 48.1
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 1.9e-41 174.1 213 47.9
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 4.1e-41 172.9 228 48.7
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 4.1e-41 172.9 228 48.2
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 5.4e-41 172.6 215 47.4
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 9.2e-41 171.8 219 48.4
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 1.6e-40 171.0 217 49.3
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 2.0e-40 170.6 219 48.9
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 2.7e-40 170.2 220 47.7
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 2.7e-40 170.2 221 46.2
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 3.5e-40 169.9 220 42.7
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 1.0e-39 168.3 219 47.5
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 1.0e-39 168.3 219 45.2
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 1.3e-39 167.9 223 44.4
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 2.3e-39 167.2 221 45.7
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 2.3e-39 167.2 220 46.4
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 2.3e-39 167.2 266 39.8
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 2.3e-39 167.2 217 45.2
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 3.0e-39 166.8 220 46.4
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 8.6e-39 165.2 224 45.5
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 1.5e-38 164.5 226 45.6
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 2.5e-38 163.7 221 46.2
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 3.3e-38 163.3 218 49.5
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 3.3e-38 163.3 217 48.4
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 3.3e-38 163.3 217 48.4
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 2.8e-37 160.2 223 45.3
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 4.7e-37 159.5 230 46.5
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 4.7e-37 159.5 217 47.0
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 4.7e-37 159.5 241 42.3
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 6.2e-37 159.1 217 47.5
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 8.0e-37 158.7 220 45.5
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 1.1e-36 158.3 221 44.3
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 1.8e-36 157.5 221 44.8
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 3.1e-36 156.8 216 44.0
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 4.0e-36 156.4 222 44.1
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 8.9e-36 155.2 229 42.4
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 1.2e-35 154.8 224 45.5
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 3.4e-35 153.3 229 45.4
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 4.4e-35 152.9 224 44.2
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 2.2e-34 150.6 228 44.7
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 3.7e-34 149.8 220 41.8
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 6.4e-34 149.1 221 46.2
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 1.1e-33 148.3 222 45.5
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 1.4e-33 147.9 225 42.2
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 1.4e-33 147.9 235 42.1
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 3.2e-33 146.7 220 42.3
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 3.2e-33 146.7 222 44.1
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 3.2e-33 146.7 218 41.3
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 4.1e-33 146.4 221 43.0
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 4.1e-33 146.4 165 52.1
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 3.5e-32 143.3 232 41.8
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 1.0e-31 141.7 199 46.7
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 1.0e-31 141.7 225 43.1
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 1.3e-31 141.4 226 40.7
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 1.7e-31 141.0 219 40.2
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 5.1e-31 139.4 230 41.3
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 6.6e-31 139.0 220 40.0
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 1.9e-30 137.5 221 38.0
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 5.6e-30 136.0 216 38.9
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 7.3e-30 135.6 223 43.9
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 1.2e-29 134.8 223 39.5
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 2.1e-29 134.0 221 36.7
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 2.8e-29 133.7 221 41.2
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 3.6e-29 133.3 239 36.8
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 3.6e-29 133.3 165 46.7
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 8.1e-29 132.1 214 38.3
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 1.4e-28 131.3 219 37.0
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 1.4e-28 131.3 211 37.9
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 6.8e-28 129.0 128 54.7
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 3.4e-27 126.7 224 39.7
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 4.4e-27 126.3 228 38.2
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 5.8e-27 125.9 125 54.4
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 9.9e-27 125.2 165 47.3
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 1.7e-26 124.4 228 36.8
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 4.9e-26 122.9 223 39.0
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 8.3e-26 122.1 235 35.3
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 3.2e-25 120.2 220 38.2
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 9.2e-25 118.6 221 35.7
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 4.6e-24 116.3 234 37.6
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 1.3e-23 114.8 234 36.8
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 8.6e-23 112.1 232 37.9
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 8.6e-23 112.1 223 37.2
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 1.9e-22 110.9 221 38.9
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 4.3e-22 109.8 213 36.6
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 9.5e-22 108.6 241 33.6
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 1.6e-21 107.8 237 34.6
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 3.6e-21 106.7 131 44.3
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 4.0e-20 103.2 174 40.8
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 4.2e-17 93.2 121 48.8
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 1.0e-15 88.6 238 31.1
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 3.0e-15 87.0 112 41.1
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 3.9e-15 86.7 135 37.8
CDE06G0604 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 1.5e-14 84.7 111 47.7
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 1.7e-10 71.2 55 60.0
SEGI_26799 Sequoiadendron giganteum HOM05D006456 ORTHO05D007588 1.7e-10 71.2 101 42.6
SHI16259 Sapria himalayana HOM05D006456 ORTHO05D007588 3.0e-07 60.5 86 41.9
Actinidia31998 Actinidia chinensis HOM05D006456 ORTHO05D007588 3.3e-06 57.0 84 39.3
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 3.3e-06 57.0 80 38.8


User provided reference genes

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