Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 1.6e-80 302.8 161 100.0
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 4.9e-37 158.3 158 55.1
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 5.3e-31 138.3 157 50.3
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 9.0e-31 137.5 150 50.0
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 3.4e-30 135.6 153 49.7
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 1.0e-29 134.0 160 47.5
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 5.0e-29 131.7 159 47.2
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 8.5e-29 131.0 155 48.4
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 1.1e-28 130.6 151 47.7
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 1.9e-28 129.8 157 48.4
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 1.9e-28 129.8 152 46.7
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 3.2e-28 129.0 155 49.7
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 9.3e-28 127.5 159 45.9
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 1.2e-27 127.1 154 49.4
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 1.6e-27 126.7 159 46.5
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.7e-27 125.9 161 48.4
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 3.6e-27 125.6 161 47.8
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 4.6e-27 125.2 158 48.7
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 6.1e-27 124.8 156 49.4
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 6.1e-27 124.8 151 47.7
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 7.9e-27 124.4 159 45.9
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 7.9e-27 124.4 151 47.7
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 7.9e-27 124.4 154 48.7
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 1.3e-26 123.6 149 47.7
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 1.3e-26 123.6 158 46.8
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.8e-26 123.2 161 48.4
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 1.8e-26 123.2 158 46.8
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 3.0e-26 122.5 155 45.8
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 3.9e-26 122.1 157 48.4
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 3.9e-26 122.1 149 44.3
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 1.1e-25 120.6 126 50.0
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 1.1e-25 120.6 151 47.0
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.1e-25 120.6 167 46.1
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 1.9e-25 119.8 165 45.5
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 7.4e-25 117.9 164 45.1
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 9.7e-25 117.5 169 46.2
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 9.7e-25 117.5 169 45.6
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 2.8e-24 115.9 154 45.5
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 3.7e-24 115.5 155 44.5
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 4.8e-24 115.2 169 45.6
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 8.2e-24 114.4 160 44.4
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 1.1e-23 114.0 158 45.6
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 2.4e-23 112.8 157 43.9
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 3.1e-23 112.5 162 43.8
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 4.1e-23 112.1 149 45.6
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 4.1e-23 112.1 185 40.5
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 4.1e-23 112.1 150 48.0
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 1.2e-22 110.5 150 45.3
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 1.5e-22 110.2 160 43.1
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 2.6e-22 109.4 153 45.1
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 4.5e-22 108.6 116 50.0
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 5.9e-22 108.2 152 48.0
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 7.7e-22 107.8 160 43.8
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 1.3e-21 107.1 164 43.9
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 2.2e-21 106.3 145 45.5
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 1.1e-20 104.0 149 43.6
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 1.4e-20 103.6 148 45.3
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 2.5e-20 102.8 140 42.9
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 1.2e-19 100.5 165 43.6
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 3.6e-19 99.0 127 47.2
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 7.9e-19 97.8 131 42.0
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 1.5e-17 93.6 113 48.7
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 3.3e-17 92.4 126 42.1
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 4.4e-17 92.0 126 42.1
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 5.7e-17 91.7 125 43.2
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 5.7e-17 91.7 128 39.8
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 2.2e-16 89.7 121 41.3
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 8.2e-16 87.8 126 40.5
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 1.4e-15 87.0 126 40.5
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 2.4e-15 86.3 148 41.2
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 5.9e-14 81.6 135 40.7
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.3e-13 80.5 124 38.7
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 6.5e-13 78.2 150 40.0
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 9.4e-12 74.3 159 34.6
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 2.1e-11 73.2 126 39.7
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 6.1e-11 71.6 105 41.0
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 1.4e-10 70.5 79 49.4
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 1.8e-10 70.1 111 40.5
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 2.8e-08 62.8 125 40.8
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 3.1e-07 59.3 87 40.2


User provided reference genes

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