Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0053G018 Amborella trichopoda HOM05D007164 ORTHO05D008802 0.0e+00 1140.9 565 100.0
ATR0691G271 Amborella trichopoda HOM05D007164 ORTHO05D008802 2.4e-54 217.6 150 77.3
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 7.3e-51 206.1 497 31.6
MBI16_g23765_MAGBIO Magnolia biondii HOM05D007164 ORTHO05D008802 1.1e-41 175.6 372 33.3
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 8.6e-36 156.0 397 30.5
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 1.5e-35 155.2 351 33.0
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 1.6e-34 151.8 244 37.7
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 3.6e-34 150.6 398 31.4
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 8.9e-33 146.0 420 30.2
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 1.2e-32 145.6 464 29.1
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 1.2e-32 145.6 384 31.8
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 2.6e-32 144.4 402 29.6
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 2.2e-31 141.4 450 30.0
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 9.2e-30 136.0 422 29.9
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 1.6e-29 135.2 431 30.2
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.6e-29 135.2 423 29.6
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 1.6e-29 135.2 343 31.5
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 2.7e-29 134.4 422 28.9
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 7.8e-29 132.9 306 30.7
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 1.0e-28 132.5 313 32.3
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 3.9e-28 130.6 353 33.1
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 5.1e-28 130.2 222 39.6
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 1.5e-27 128.6 453 28.7
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 1.5e-27 128.6 451 28.8
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 1.9e-27 128.3 223 40.4
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 2.5e-27 127.9 301 31.2
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 9.5e-27 125.9 323 31.3
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 1.6e-26 125.2 461 29.1
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 1.6e-26 125.2 338 32.0
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 1.6e-26 125.2 433 29.3
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 3.6e-26 124.0 441 27.4
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 6.2e-26 123.2 229 38.0
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 6.8e-25 119.8 171 42.1
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 8.9e-25 119.4 337 27.6
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 8.9e-25 119.4 244 34.4
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 8.9e-25 119.4 447 25.7
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 3.4e-24 117.5 368 31.2
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 4.4e-24 117.1 195 35.9
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 1.7e-23 115.2 321 31.2
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 1.7e-23 115.2 383 30.5
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 4.9e-23 113.6 387 29.7
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 4.9e-23 113.6 303 33.3
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 2.4e-22 111.3 241 32.4
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 3.2e-22 110.9 340 30.6
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 9.2e-22 109.4 371 28.6
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 1.6e-21 108.6 473 24.3
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 2.1e-21 108.2 227 35.2
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 2.7e-21 107.8 318 28.6
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 4.6e-21 107.1 227 33.0
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 6.0e-21 106.7 367 28.1
Hund18121 Selenicereus undatus HOM05D007164 ORTHO05D008802 1.0e-20 105.9 246 32.1
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 1.3e-20 105.5 474 25.9
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 1.3e-20 105.5 491 25.9
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 3.0e-20 104.4 308 28.9
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 3.0e-20 104.4 174 37.4
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 3.0e-20 104.4 344 26.7
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 3.0e-20 104.4 199 33.2
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 6.6e-20 103.2 474 25.5
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 1.1e-19 102.4 317 28.1
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 1.5e-19 102.1 174 36.2
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 2.5e-19 101.3 336 28.6
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 3.3e-19 100.9 340 27.4
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 3.3e-19 100.9 152 39.5
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 5.6e-19 100.1 320 28.4
Migut.D00187 Erythranthe guttata HOM05D007164 ORTHO05D008802 1.2e-18 99.0 233 34.3
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 1.6e-18 98.6 145 41.4
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 2.1e-18 98.2 309 28.8
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 2.8e-18 97.8 238 33.6
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 3.6e-18 97.4 416 27.6
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 4.7e-18 97.1 167 37.1
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 4.7e-18 97.1 221 32.6
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 1.4e-17 95.5 318 28.0
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 1.4e-17 95.5 410 26.8
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 1.8e-17 95.1 375 26.7
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 4.4e-16 90.5 293 27.0
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 9.9e-16 89.4 173 35.8
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 1.3e-15 89.0 435 24.8
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 1.3e-15 89.0 203 35.5
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 2.2e-15 88.2 332 26.8
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 2.9e-15 87.8 193 30.6
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 6.4e-15 86.7 200 33.5
Oeu047456.1 Olea europaea HOM05D007164 ORTHO05D008802 1.2e-13 82.4 153 39.2
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 2.1e-13 81.6 176 36.4
Nitab4.5_0005474g0060 Nicotiana tabacum HOM05D000498 ORTHO05D000354 1.0e-12 79.3 180 33.3
Nitab4.5_0009457g0020 Nicotiana tabacum HOM05D007164 ORTHO05D008802 1.0e-12 79.3 181 33.7
Solyc09g074840.4 Solanum lycopersicum HOM05D007164 ORTHO05D008802 1.3e-12 79.0 286 28.7
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 2.3e-12 78.2 266 28.9
AagrBONN_evm.TU.Sc2ySwM_117.3923 Anthoceros agrestis HOM05D007164 ORTHO05D008802 1.3e-10 72.4 186 29.0
Peaxi162Scf00067g02422 Petunia axillaris HOM05D007164 ORTHO05D008802 1.3e-10 72.4 342 26.6
SEGI_29739 Sequoiadendron giganteum HOM05D007164 ORTHO05D008802 2.8e-10 71.2 87 42.5
HanXRQChr10g0283981 Helianthus annuus HOM05D007164 ORTHO05D008802 6.2e-10 70.1 69 50.7
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 6.2e-10 70.1 394 25.4
MELO3C019559.2 Cucumis melo HOM05D007164 ORTHO05D008802 1.1e-09 69.3 256 28.9
Pp3c3_15490 Physcomitrium patens HOM05D007164 ORTHO05D008802 9.9e-08 62.8 248 23.8
VMungo0540G1256 Vigna mungo HOM05D007164 ORTHO05D008802 1.3e-07 62.4 93 38.7
Zm00001eb133720 Zea mays HOM05D000144 ORTHO05D008802 9.3e-06 56.2 90 36.7


User provided reference genes

Program Settings