Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 8.2e-216 753.4 378 100.0
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 5.2e-154 548.1 395 73.2
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 4.4e-153 545.0 358 77.7
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 6.4e-152 541.2 341 78.0
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 8.3e-152 540.8 358 77.4
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 3.2e-151 538.9 338 78.1
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 2.0e-150 536.2 353 76.2
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.3e-149 533.5 371 73.6
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 4.3e-148 528.5 354 76.3
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 9.5e-148 527.3 334 79.0
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 1.2e-147 526.9 322 81.1
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 2.8e-147 525.8 329 80.5
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 4.7e-147 525.0 322 80.7
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 8.1e-147 524.2 307 84.4
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 8.1e-147 524.2 307 84.4
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 1.1e-146 523.9 354 77.1
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 8.9e-146 520.8 315 81.0
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 2.0e-145 519.6 323 79.6
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.6e-145 519.2 358 75.1
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 2.6e-145 519.2 355 75.8
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 4.4e-145 518.5 355 75.5
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 4.4e-145 518.5 324 81.2
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 5.8e-145 518.1 328 79.3
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 5.8e-145 518.1 346 75.1
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 7.5e-145 517.7 319 79.3
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 9.8e-145 517.3 324 80.9
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.3e-144 516.9 313 81.2
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 1.3e-144 516.9 328 79.3
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 1.7e-144 516.5 339 77.0
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 1.7e-144 516.5 358 71.8
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 2.9e-144 515.8 362 71.3
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 2.9e-144 515.8 335 77.3
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 3.7e-144 515.4 306 83.0
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 3.7e-144 515.4 328 78.4
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 4.9e-144 515.0 338 76.6
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 4.9e-144 515.0 348 76.7
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 8.3e-144 514.2 337 76.3
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 1.1e-143 513.8 327 77.7
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 1.4e-143 513.5 328 77.4
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 1.4e-143 513.5 334 76.9
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 3.2e-143 512.3 349 73.6
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 3.2e-143 512.3 317 77.9
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 4.1e-143 511.9 325 77.8
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 5.4e-143 511.5 333 77.5
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 7.1e-143 511.1 341 74.8
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 9.2e-143 510.8 333 75.7
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 9.2e-143 510.8 341 76.0
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 1.6e-142 510.0 365 72.6
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 1.6e-142 510.0 305 81.0
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 2.7e-142 509.2 331 77.0
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 2.7e-142 509.2 361 72.9
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 3.5e-142 508.8 329 77.2
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 3.5e-142 508.8 330 76.4
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 4.6e-142 508.4 343 75.5
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 6.0e-142 508.1 321 76.6
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 6.0e-142 508.1 336 76.8
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 7.8e-142 507.7 330 77.3
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 1.7e-141 506.5 372 71.8
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 1.7e-141 506.5 333 77.2
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 1.7e-141 506.5 337 74.2
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 1.7e-141 506.5 306 79.4
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 2.3e-141 506.1 344 73.5
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 5.1e-141 505.0 314 79.0
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 5.1e-141 505.0 315 79.4
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 1.1e-140 503.8 378 69.8
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.1e-140 503.8 378 69.8
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.1e-140 503.8 312 77.2
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 1.5e-140 503.4 306 79.1
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 1.5e-140 503.4 312 77.2
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 1.9e-140 503.1 366 71.9
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 1.9e-140 503.1 312 76.9
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 1.9e-140 503.1 325 76.3
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 2.5e-140 502.7 321 76.0
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 3.3e-140 502.3 331 74.3
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.3e-140 501.9 316 78.2
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 4.3e-140 501.9 325 76.6
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 5.6e-140 501.5 311 80.1
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 7.3e-140 501.1 339 73.7
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 1.2e-139 500.4 320 77.5
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 1.2e-139 500.4 333 75.7
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 1.2e-139 500.4 313 78.0
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 1.2e-139 500.4 325 75.7
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 6.2e-139 498.0 347 70.9
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 1.8e-138 496.5 326 77.9
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 2.3e-138 496.1 377 69.2
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 2.3e-138 496.1 313 78.6
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 3.1e-138 495.7 326 75.8
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 5.2e-138 495.0 323 75.5
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 5.2e-138 495.0 339 72.6
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 6.8e-138 494.6 369 69.6
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 8.9e-138 494.2 339 73.2
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 8.9e-138 494.2 307 79.2
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 8.9e-138 494.2 297 81.5
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.5e-137 493.4 330 75.5
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 1.5e-137 493.4 367 69.5
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 2.0e-137 493.0 321 75.7
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 2.0e-137 493.0 326 76.7
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.4e-137 492.3 368 70.1
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 9.9e-137 490.7 319 78.4
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.7e-136 490.0 311 77.2
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 3.8e-136 488.8 325 76.6
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 3.8e-136 488.8 325 76.6
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 3.8e-136 488.8 325 76.6
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 4.9e-136 488.4 325 76.6
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 4.9e-136 488.4 325 76.6
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 4.9e-136 488.4 325 76.6
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 6.4e-136 488.0 309 77.0
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 6.4e-136 488.0 331 76.1
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 6.4e-136 488.0 342 72.2
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 6.4e-136 488.0 364 70.1
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 8.4e-136 487.6 311 75.9
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 8.4e-136 487.6 330 76.4
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 1.1e-135 487.3 307 80.1
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 1.1e-135 487.3 321 76.9
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 4.1e-135 485.3 344 70.3
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 1.0e-133 480.7 315 74.3
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 1.3e-133 480.3 346 71.4
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 3.9e-133 478.8 307 76.5
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 4.3e-132 475.3 320 74.1
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 8.1e-131 471.1 321 73.2
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 1.8e-130 469.9 301 76.7
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 2.6e-129 466.1 339 69.6
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 4.4e-129 465.3 356 63.5
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 2.9e-128 462.6 421 59.4
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 2.9e-128 462.6 344 69.8
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 5.4e-127 458.4 358 67.3
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 2.7e-126 456.1 334 67.4
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 1.7e-125 453.4 314 72.0
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 2.3e-125 453.0 312 68.9
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 1.1e-124 450.7 309 69.3
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 3.3e-124 449.1 272 79.4
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.3e-123 447.2 350 62.0
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 5.8e-121 438.3 291 77.7
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 4.9e-120 435.3 338 67.2
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 6.4e-120 434.9 352 65.9
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 5.4e-119 431.8 280 75.0
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 7.1e-119 431.4 322 71.4
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 4.6e-118 428.7 311 66.2
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.3e-117 427.2 251 81.7
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 2.1e-115 419.9 237 86.1
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 2.8e-115 419.5 325 68.3
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 1.1e-114 417.5 336 61.6
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 9.3e-111 404.4 339 66.1
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.3e-107 394.0 322 64.3
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 2.8e-107 392.9 381 56.7
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 2.6e-105 386.3 318 62.6
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 2.2e-104 383.3 302 66.6
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 3.2e-95 352.8 222 79.3
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 1.8e-93 347.1 337 54.6
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 9.7e-92 341.3 227 74.4
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 5.9e-89 332.0 222 70.7
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 1.1e-76 291.2 245 64.9
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 4.2e-63 246.1 345 45.8
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 4.2e-63 246.1 172 68.6
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 9.8e-60 235.0 151 76.8
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 1.4e-53 214.5 159 70.4
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 2.0e-41 174.1 156 57.7
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 2.0e-33 147.5 95 76.8
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 5.2e-29 132.9 105 64.8
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 2.9e-27 127.1 331 29.6
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 5.4e-26 122.9 335 29.0
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 1.7e-24 117.9 337 27.0
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 4.7e-22 109.8 65 76.9
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.1e-21 108.6 236 35.2
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 4.1e-18 96.7 67 73.1
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 4.1e-18 96.7 67 73.1
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 9.2e-18 95.5 377 26.3
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 1.6e-17 94.7 67 73.1
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 3.9e-16 90.1 59 72.9
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 1.1e-15 88.6 80 61.2
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 5.4e-10 69.7 57 66.7
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 7.1e-10 69.3 108 35.2
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 1.2e-09 68.6 34 91.2
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 1.6e-09 68.2 33 93.9
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 1.7e-08 64.7 35 82.9
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 1.5e-07 61.6 39 71.8
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 1.5e-07 61.6 39 71.8
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 2.5e-07 60.8 39 69.2


User provided reference genes

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