Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 3.6e-51 204.5 97 100.0
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 7.1e-39 163.7 92 83.7
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 1.7e-24 115.9 96 61.5
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 8.4e-24 113.6 92 62.0
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 4.2e-23 111.3 97 57.7
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 4.2e-23 111.3 97 57.7
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 5.5e-23 110.9 95 60.0
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 5.5e-23 110.9 96 57.3
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 7.1e-23 110.5 96 56.2
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 7.1e-23 110.5 96 57.3
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 9.3e-23 110.2 97 56.7
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 2.1e-22 109.0 98 58.2
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 2.1e-22 109.0 96 58.3
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 4.6e-22 107.8 84 59.5
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 4.6e-22 107.8 97 59.8
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 6.0e-22 107.5 96 57.3
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 7.9e-22 107.1 96 56.2
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 7.9e-22 107.1 97 57.7
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 1.0e-21 106.7 96 58.3
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 1.3e-21 106.3 96 57.3
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 1.8e-21 105.9 96 57.3
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 2.3e-21 105.5 96 56.2
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 3.0e-21 105.1 96 56.2
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 3.0e-21 105.1 84 60.7
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 3.0e-21 105.1 96 58.3
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 3.9e-21 104.8 94 55.3
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 3.9e-21 104.8 96 56.2
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 1.1e-20 103.2 84 63.1
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 1.5e-20 102.8 96 57.3
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 1.5e-20 102.8 96 57.3
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 1.9e-20 102.4 94 55.3
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 1.9e-20 102.4 97 54.6
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 2.5e-20 102.1 96 54.2
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 4.3e-20 101.3 97 55.7
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 5.6e-20 100.9 96 54.2
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 5.6e-20 100.9 84 57.1
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 7.4e-20 100.5 96 54.2
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 7.4e-20 100.5 96 58.3
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 7.4e-20 100.5 96 53.1
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 7.4e-20 100.5 96 52.1
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 9.6e-20 100.1 84 59.5
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 1.3e-19 99.8 96 55.2
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 1.6e-19 99.4 96 54.2
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 1.6e-19 99.4 96 52.1
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 1.6e-19 99.4 96 54.2
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 2.1e-19 99.0 96 52.1
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 2.1e-19 99.0 84 58.3
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 2.1e-19 99.0 96 53.1
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 2.8e-19 98.6 79 62.0
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 3.7e-19 98.2 98 55.1
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 3.7e-19 98.2 93 52.7
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 8.2e-19 97.1 96 56.2
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 8.2e-19 97.1 96 53.1
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 1.1e-18 96.7 96 53.1
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.1e-18 96.7 97 52.6
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 1.4e-18 96.3 96 52.1
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 1.4e-18 96.3 96 47.9
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 1.4e-18 96.3 96 54.2
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 1.8e-18 95.9 96 53.1
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 2.4e-18 95.5 96 54.2
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 2.4e-18 95.5 96 54.2
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 2.4e-18 95.5 96 54.2
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 2.4e-18 95.5 79 59.5
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 2.4e-18 95.5 85 57.6
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 2.4e-18 95.5 85 57.6
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 2.4e-18 95.5 77 62.3
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 3.1e-18 95.1 100 45.0
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 5.3e-18 94.4 98 50.0
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 5.3e-18 94.4 79 57.0
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 5.3e-18 94.4 105 46.7
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 5.3e-18 94.4 97 52.6
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 5.3e-18 94.4 96 53.1
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 6.9e-18 94.0 94 54.3
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 6.9e-18 94.0 84 56.0
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 6.9e-18 94.0 96 54.2
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 9.0e-18 93.6 96 52.1
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 9.0e-18 93.6 96 49.0
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 1.2e-17 93.2 99 51.5
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 1.2e-17 93.2 97 50.5
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 1.2e-17 93.2 79 59.5
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 1.2e-17 93.2 79 59.5
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 1.5e-17 92.8 96 45.8
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 1.5e-17 92.8 79 58.2
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 1.5e-17 92.8 79 58.2
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 2.0e-17 92.4 77 59.7
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 2.6e-17 92.0 79 55.7
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 3.4e-17 91.7 98 51.0
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 3.4e-17 91.7 79 57.0
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 4.5e-17 91.3 80 57.5
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 4.5e-17 91.3 97 53.6
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 5.8e-17 90.9 96 49.0
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 5.8e-17 90.9 84 56.0
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 1.3e-16 89.7 84 54.8
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 1.7e-16 89.4 84 52.4
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 2.2e-16 89.0 79 57.0
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 2.2e-16 89.0 79 57.0
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 2.9e-16 88.6 79 55.7
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 8.4e-16 87.0 80 57.5
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 8.4e-16 87.0 79 54.4
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 1.1e-15 86.7 84 50.0
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 2.5e-15 85.5 73 54.8
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 2.5e-15 85.5 77 51.9
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 4.2e-15 84.7 84 50.0
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 5.5e-15 84.3 86 52.3
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 5.5e-15 84.3 79 54.4
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 5.5e-15 84.3 90 52.2
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 2.1e-14 82.4 79 51.9
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 3.9e-13 78.2 79 40.5
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 1.1e-12 76.6 71 54.9
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 2.5e-12 75.5 69 55.1
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 3.7e-11 71.6 72 51.4
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 3.1e-10 68.6 68 44.1
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 6.9e-10 67.4 76 46.1
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 9.0e-10 67.0 92 42.4
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 1.2e-09 66.6 71 45.1
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 2.2e-08 62.4 78 44.9
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 2.2e-08 62.4 80 47.5
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 2.9e-08 62.0 73 46.6
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 1.4e-07 59.7 78 43.6
ATR0326G034 Amborella trichopoda HOM05D005681 ORTHO05D068436 4.6e-06 54.7 32 68.8
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 4.6e-06 54.7 57 47.4


User provided reference genes

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