Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0051G010 Amborella trichopoda HOM05D003500 ORTHO05D003919 2.2e-133 479.2 277 100.0
QL12p026085 Quercus lobata HOM05D003500 ORTHO05D003919 1.7e-16 90.9 162 40.1
TAR624G1157 Trochodendron aralioides HOM05D003500 ORTHO05D003919 2.2e-16 90.5 163 38.7
Dinv30238 Davidia involucrata HOM05D003500 ORTHO05D003919 6.3e-16 89.0 164 36.6
Cfa013328 Carpinus fangiana HOM05D003500 ORTHO05D003919 9.2e-15 85.1 136 41.9
CiPaw.07G208500 Carya illinoinensis HOM05D003500 ORTHO05D003919 9.2e-15 85.1 133 41.4
Haze_21819 Corylus avellana HOM05D003500 ORTHO05D003919 1.2e-14 84.7 134 41.0
ECA248G2427 Erigeron canadensis HOM05D002222 ORTHO05D002354 2.3e-13 80.5 163 38.0
Hma1.2p1_0140F.1_g063720 Hydrangea macrophylla HOM05D003500 ORTHO05D003919 2.3e-13 80.5 160 34.4
ClCG08G012430 Citrullus lanatus HOM05D003500 ORTHO05D003919 2.9e-13 80.1 165 40.0
PSO063G0209 Papaver somniferum HOM05D003500 ORTHO05D003919 5.0e-13 79.3 155 35.5
Duzib187G1538 Durio zibethinus HOM05D003500 ORTHO05D003919 8.6e-13 78.6 135 41.5
MBI11_g07535_MAGBIO Magnolia biondii HOM05D003500 ORTHO05D003919 8.6e-13 78.6 163 39.3
SGA_v2.0_scaffold169G38640 Striga asiatica HOM05D003500 ORTHO05D003919 1.1e-12 78.2 164 32.3
THA.LOC104818564 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 1.5e-12 77.8 160 38.8
CSS0048332 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 2.5e-12 77.0 143 35.0
CsaV3_3G025090 Cucumis sativus L. HOM05D003500 ORTHO05D003919 3.3e-12 76.6 139 38.1
Aqoxy7G01735 Aquilegia oxysepala HOM05D003500 ORTHO05D003919 4.3e-12 76.3 135 36.3
Dinv14210 Davidia involucrata HOM05D003500 ORTHO05D003919 4.3e-12 76.3 160 35.0
Rhsim07G0154900 Rhododendron simsii HOM05D003500 ORTHO05D003919 4.3e-12 76.3 140 32.9
Potri.018G035800 Populus trichocarpa HOM05D003500 ORTHO05D003919 7.3e-12 75.5 158 34.8
Thecc.09G037900 Theobroma cacao HOM05D003500 ORTHO05D003919 7.3e-12 75.5 132 37.1
Sed0000644 Sechium edule HOM05D003500 ORTHO05D003919 1.2e-11 74.7 150 39.3
Actinidia14650 Actinidia chinensis HOM05D003500 ORTHO05D003919 1.6e-11 74.3 154 32.5
PSO782G3147 Papaver somniferum HOM05D003500 ORTHO05D003919 2.1e-11 73.9 155 34.8
MELO3C011162.2 Cucumis melo HOM05D003500 ORTHO05D003919 6.1e-11 72.4 138 40.6
Sabra18G0036300 Salix brachista HOM05D003500 ORTHO05D003919 1.4e-10 71.2 164 32.3
Gohir.A07G024400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 1.8e-10 70.9 174 30.5
Thecc.06G088400 Theobroma cacao HOM05D003500 ORTHO05D003919 1.8e-10 70.9 132 37.1
Duzib235G1266 Durio zibethinus HOM05D003500 ORTHO05D003919 2.3e-10 70.5 149 34.9
COL.COLO4_30382 Corchorus olitorius HOM05D003500 ORTHO05D003919 4.0e-10 69.7 147 39.5
Dinv30507 Davidia involucrata HOM05D003500 ORTHO05D003919 4.0e-10 69.7 141 41.1
Gorai.001G029300 Gossypium raimondii HOM05D003500 ORTHO05D003919 4.0e-10 69.7 134 32.8
Haze_16428 Corylus avellana HOM05D003500 ORTHO05D003919 5.2e-10 69.3 167 34.7
Gohir.D07G028000 Gossypium hirsutum HOM05D003500 ORTHO05D003919 5.2e-10 69.3 174 31.0
Sed0003187 Sechium edule HOM05D003500 ORTHO05D003919 5.2e-10 69.3 173 34.1
A08p18080 Brassica napus HOM05D003500 ORTHO05D003919 6.8e-10 68.9 126 34.9
Prupe.3G070800 Prunus persica HOM05D003500 ORTHO05D003919 6.8e-10 68.9 134 38.1
QL05p023510 Quercus lobata HOM05D003500 ORTHO05D003919 6.8e-10 68.9 174 35.1
Ah.10g025530 Amaranthus hybridus HOM05D003500 ORTHO05D003919 8.9e-10 68.6 130 36.2
CiPaw.01G239100 Carya illinoinensis HOM05D003500 ORTHO05D003919 8.9e-10 68.6 134 35.8
CsaV3_2G031120 Cucumis sativus L. HOM05D003500 ORTHO05D003919 8.9e-10 68.6 163 38.0
BcaB03g12755 Brassica carinata HOM05D003500 ORTHO05D003919 1.2e-09 68.2 126 33.3
Cfa002069 Carpinus fangiana HOM05D003500 ORTHO05D003919 1.2e-09 68.2 164 34.8
AUR62032393 Chenopodium quinoa HOM05D003500 ORTHO05D003919 1.2e-09 68.2 129 34.1
ClCG07G013080 Citrullus lanatus HOM05D003500 ORTHO05D003919 1.2e-09 68.2 144 38.2
Solyc08g068060.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 1.2e-09 68.2 132 36.4
Sopen08g021950 Solanum pennellii HOM05D003500 ORTHO05D003919 1.2e-09 68.2 132 36.4
arahy.Tifrunner.gnm1.ann1.V41S3G Arachis hypogaea HOM05D003500 ORTHO05D003919 1.5e-09 67.8 130 35.4
BraA08t33760Z Brassica rapa HOM05D003500 ORTHO05D003919 1.5e-09 67.8 126 34.9
Oeu014656.1 Olea europaea HOM05D003500 ORTHO05D003919 1.5e-09 67.8 129 35.7
RcHm_v2.0_Chr6g0305551 Rosa chinensis HOM05D003500 ORTHO05D003919 1.5e-09 67.8 130 36.9
EL10Ac2g02525 Beta vulgaris HOM05D003500 ORTHO05D003919 2.0e-09 67.4 135 34.8
C03p87180 Brassica napus HOM05D003500 ORTHO05D003919 2.0e-09 67.4 126 34.1
BolC3t21020H Brassica oleracea HOM05D003500 ORTHO05D003919 2.0e-09 67.4 126 34.1
Nitab4.5_0002393g0050 Nicotiana tabacum HOM05D003500 ORTHO05D003919 2.0e-09 67.4 134 35.8
CANSAT35G1218 Cannabis sativa HOM05D003500 ORTHO05D003919 2.6e-09 67.0 165 31.5
CARHR240660 Cardamine hirsuta HOM05D003500 ORTHO05D003919 2.6e-09 67.0 131 35.1
Eucgr.C02880 Eucalyptus grandis HOM05D003500 ORTHO05D003919 2.6e-09 67.0 171 30.4
Thhalv10025931m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 2.6e-09 67.0 128 35.2
HanXRQChr01g0029371 Helianthus annuus HOM05D003500 ORTHO05D003919 2.6e-09 67.0 163 31.3
C01p06230 Brassica napus HOM05D003500 ORTHO05D003919 3.4e-09 66.6 160 33.8
AUR62024822 Chenopodium quinoa HOM05D003500 ORTHO05D003919 3.4e-09 66.6 129 33.3
Duzib168G0612 Durio zibethinus HOM05D003500 ORTHO05D003919 3.4e-09 66.6 133 33.1
Manes.16G069800 Manihot esculenta HOM05D003500 ORTHO05D003919 3.4e-09 66.6 179 30.7
BcaC01g01007 Brassica carinata HOM05D003500 ORTHO05D003919 4.4e-09 66.2 126 33.3
PGSC0003DMG400014491 Solanum tuberosum HOM05D003500 ORTHO05D003919 4.4e-09 66.2 133 34.6
vmacro18911 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 4.4e-09 66.2 134 40.3
PGR044G1892 Punica granatum HOM05D003500 ORTHO05D003919 5.7e-09 65.9 164 34.1
TAR636G0685 Trochodendron aralioides HOM05D003500 ORTHO05D003919 5.7e-09 65.9 134 38.1
Ciclev10027012m.g Citrus clementina HOM05D003500 ORTHO05D003919 7.5e-09 65.5 132 35.6
BolC1t00621H Brassica oleracea HOM05D003500 ORTHO05D003919 1.3e-08 64.7 159 33.3
BraA01t00536Z Brassica rapa HOM05D003500 ORTHO05D003919 1.3e-08 64.7 170 32.9
Sp7g30440 Schrenkiella parvula HOM05D003500 ORTHO05D003919 1.3e-08 64.7 128 35.2
Sc09g0008940 Simmondsia chinensis HOM05D003500 ORTHO05D003919 1.3e-08 64.7 133 34.6
Migut.E01507 Erythranthe guttata HOM05D003500 ORTHO05D003919 1.7e-08 64.3 133 31.6
Aa31LG2G16940 Aethionema arabicum HOM05D003500 ORTHO05D003919 2.2e-08 63.9 119 37.8
TPR.G21779 Trifolium pratense HOM05D003500 ORTHO05D003919 2.2e-08 63.9 150 30.7
TPR.G31013 Trifolium pratense HOM05D003500 ORTHO05D003919 2.2e-08 63.9 148 30.4
GSVIVG01035753001 Vitis vinifera HOM05D003500 ORTHO05D003919 2.2e-08 63.9 129 31.0
A01p05660 Brassica napus HOM05D003500 ORTHO05D003919 2.9e-08 63.5 167 32.9
FvH4_2g36330 Fragaria vesca HOM05D003500 ORTHO05D003919 2.9e-08 63.5 130 36.9
FAN27G2449 Fragaria x ananassa HOM05D003500 ORTHO05D003919 2.9e-08 63.5 130 36.9
Lalb_Chr03g0029341 Lupinus albus HOM05D003500 ORTHO05D003919 2.9e-08 63.5 150 35.3
MD15G1099900 Malus domestica HOM05D003500 ORTHO05D003919 2.9e-08 63.5 136 35.3
AL7G19270 Arabidopsis lyrata HOM05D002156 ORTHO05D003919 3.7e-08 63.2 126 33.3
CANSAT56G2888 Cannabis sativa HOM05D003500 ORTHO05D003919 3.7e-08 63.2 161 34.2
Glyma.07G006100 Glycine max HOM05D003500 ORTHO05D003919 3.7e-08 63.2 173 35.3
MD17G1194800 Malus domestica HOM05D003500 ORTHO05D003919 3.7e-08 63.2 143 35.7
RcHm_v2.0_Chr2g0137891 Rosa chinensis HOM05D003500 ORTHO05D003919 3.7e-08 63.2 131 35.1
Sed0015651 Sechium edule HOM05D003500 ORTHO05D003919 3.7e-08 63.2 171 37.4
TWI32G0121 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 3.7e-08 63.2 130 31.5
Atru.chr7.2303 Acer truncatum HOM05D003500 ORTHO05D003919 4.9e-08 62.8 173 31.8
BcaC09g52062 Brassica carinata HOM05D003500 ORTHO05D003919 4.9e-08 62.8 157 31.8
MSTRG.14007 Avicennia marina HOM05D003500 ORTHO05D003919 6.4e-08 62.4 163 29.4
FvH4_6g31220 Fragaria vesca HOM05D003500 ORTHO05D003919 6.4e-08 62.4 171 32.2
FAN14G5419 Fragaria x ananassa HOM05D003500 ORTHO05D003919 6.4e-08 62.4 171 32.2
AT4G32680 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 8.3e-08 62.0 126 32.5
Rhsim08G0221500 Rhododendron simsii HOM05D003500 ORTHO05D003919 8.3e-08 62.0 167 34.1
AL7G19060 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 1.1e-07 61.6 159 30.2
CAN.G886.10 Capsicum annuum HOM05D003500 ORTHO05D003919 1.1e-07 61.6 133 33.8
FAN20G2191 Fragaria x ananassa HOM05D003500 ORTHO05D003919 1.1e-07 61.6 130 36.2
Ciclev10009124m.g Citrus clementina HOM05D003500 ORTHO05D003919 1.4e-07 61.2 160 32.5
Lsat_1_v5_gn_1_49081 Lactuca sativa HOM05D003500 ORTHO05D003919 1.4e-07 61.2 152 38.2
VMungo1127G1234 Vigna mungo HOM05D003500 ORTHO05D003919 1.4e-07 61.2 133 34.6
ECA233G0641 Erigeron canadensis HOM05D003500 ORTHO05D003919 1.8e-07 60.8 171 28.7
Glyma.08G206700 Glycine max HOM05D003500 ORTHO05D003919 1.8e-07 60.8 164 35.4
Medtr6g007370 Medicago truncatula HOM05D003500 ORTHO05D003919 1.8e-07 60.8 150 31.3
Medtr7g446310 Medicago truncatula HOM05D003500 ORTHO05D003919 1.8e-07 60.8 150 31.3
Psat7g063400 Pisum sativum HOM05D003500 ORTHO05D003919 1.8e-07 60.8 144 31.9
Potri.003G055200 Populus trichocarpa HOM05D003500 ORTHO05D003919 2.4e-07 60.5 168 32.7
PGR102G2146 Punica granatum HOM05D003500 ORTHO05D003919 2.4e-07 60.5 158 36.1
Sc12g0009290 Simmondsia chinensis HOM05D003500 ORTHO05D003919 3.2e-07 60.1 175 32.0
Actinidia15719 Actinidia chinensis HOM05D003500 ORTHO05D003919 5.4e-07 59.3 139 31.7
arahy.Tifrunner.gnm1.ann1.HR3BJH Arachis hypogaea HOM05D003500 ORTHO05D003919 5.4e-07 59.3 142 31.7
Migut.I00867 Erythranthe guttata HOM05D003500 ORTHO05D003919 5.4e-07 59.3 171 29.8
Manes.11G047100 Manihot esculenta HOM05D003500 ORTHO05D003919 5.4e-07 59.3 177 33.3
Prupe.1G454700 Prunus persica HOM05D003500 ORTHO05D003919 5.4e-07 59.3 166 28.3
Ca_26668_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 7.0e-07 58.9 138 34.1
Lj8A606T22 Lonicera japonica HOM05D003500 ORTHO05D003919 7.0e-07 58.9 175 29.7
Peaxi162Scf00015g10038 Petunia axillaris HOM05D003500 ORTHO05D003919 7.0e-07 58.9 143 33.6
DCAR_003060 Daucus carota HOM05D003500 ORTHO05D003919 2.0e-06 57.4 125 35.2
Oeu000451.1 Olea europaea HOM05D003500 ORTHO05D003919 2.0e-06 57.4 164 31.1
Phvul.011G117800 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 2.0e-06 57.4 134 32.1
TWI18G0570 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 2.0e-06 57.4 139 34.5
HPP92_005532 Vanilla planifolia HOM05D003500 ORTHO05D003919 2.0e-06 57.4 152 30.9
Nitab4.5_0000671g0100 Nicotiana tabacum HOM05D003500 ORTHO05D003919 3.5e-06 56.6 136 33.1
Nitab4.5_0005851g0060 Nicotiana tabacum HOM05D003500 ORTHO05D003919 3.5e-06 56.6 135 36.3
Actinidia32755 Actinidia chinensis HOM05D003500 ORTHO05D003919 5.9e-06 55.8 173 30.1
Eucgr.F03015 Eucalyptus grandis HOM05D003500 ORTHO05D003919 5.9e-06 55.8 162 31.5
Glyma.12G113900 Glycine max HOM05D003500 ORTHO05D003919 5.9e-06 55.8 143 32.9


User provided reference genes

Program Settings