Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0049G082 Amborella trichopoda HOM05D006478 ORTHO05D008071 1.1e-69 266.5 141 100.0
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 1.3e-25 120.2 110 59.1
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 1.3e-25 120.2 122 53.3
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 1.4e-24 116.7 123 54.5
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 1.9e-24 116.3 123 52.0
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 2.5e-24 115.9 123 55.3
CDE02G0477 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 4.2e-24 115.2 117 51.3
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 7.2e-24 114.4 103 61.2
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 9.4e-24 114.0 121 52.1
TAR629G1779 Trochodendron aralioides HOM05D006478 ORTHO05D008071 9.4e-24 114.0 132 50.8
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 2.7e-23 112.5 120 47.5
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 2.7e-23 112.5 120 55.0
Manes.14G035000 Manihot esculenta HOM05D006478 ORTHO05D008071 3.6e-23 112.1 117 53.8
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 4.6e-23 111.7 120 50.0
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 6.1e-23 111.3 143 45.5
Carub.0008s1155 Capsella rubella HOM05D006478 ORTHO05D008071 7.9e-23 110.9 112 53.6
PGR042G2342 Punica granatum HOM05D006478 ORTHO05D008071 7.9e-23 110.9 121 52.1
Sc19g0001980 Simmondsia chinensis HOM05D006478 ORTHO05D008071 7.9e-23 110.9 116 50.9
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 1.4e-22 110.2 103 56.3
Sopen11g002780 Solanum pennellii HOM05D006478 ORTHO05D008071 1.8e-22 109.8 120 47.5
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 2.3e-22 109.4 103 56.3
MELO3C006818.2 Cucumis melo HOM05D006478 ORTHO05D008071 2.3e-22 109.4 112 53.6
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 2.3e-22 109.4 112 54.5
Atru.chr1.683 Acer truncatum HOM05D006478 ORTHO05D008071 3.0e-22 109.0 115 53.0
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 3.9e-22 108.6 127 49.6
Atru.chr12.858 Acer truncatum HOM05D006478 ORTHO05D008071 5.1e-22 108.2 115 53.0
Thhalv10014843m.g Eutrema salsugineum HOM05D006478 ORTHO05D008071 5.1e-22 108.2 112 51.8
MD07G1255100 Malus domestica HOM05D006478 ORTHO05D008071 5.1e-22 108.2 112 54.5
vmacro09898 Vaccinium macrocarpon HOM05D006478 ORTHO05D008071 5.1e-22 108.2 123 49.6
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 6.7e-22 107.8 110 53.6
Sp6g13670 Schrenkiella parvula HOM05D006478 ORTHO05D008071 6.7e-22 107.8 112 51.8
HPP92_021027 Vanilla planifolia HOM05D006478 ORTHO05D008071 6.7e-22 107.8 121 49.6
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 8.8e-22 107.5 112 52.7
Nn6g34073 Nelumbo nucifera HOM05D006478 ORTHO05D008071 1.1e-21 107.1 117 48.7
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 1.1e-21 107.1 110 52.7
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 1.5e-21 106.7 122 47.5
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.5e-21 106.7 112 55.4
AL64U10030 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 2.0e-21 106.3 112 51.8
AL8G25810 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 2.0e-21 106.3 112 51.8
AT5G51510 Arabidopsis thaliana HOM05D006478 ORTHO05D008071 2.0e-21 106.3 112 50.0
CDE11G0941 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 2.0e-21 106.3 115 48.7
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 2.6e-21 105.9 120 49.2
Sed0002492 Sechium edule HOM05D006478 ORTHO05D008071 3.3e-21 105.5 110 51.8
DCAR_028724 Daucus carota HOM05D006478 ORTHO05D008071 5.7e-21 104.8 124 48.4
Peaxi162Scf00241g00526 Petunia axillaris HOM05D006478 ORTHO05D008071 7.4e-21 104.4 121 47.1
Psat3g066720 Pisum sativum HOM05D006478 ORTHO05D008071 7.4e-21 104.4 128 47.7
FAN07G1397 Fragaria x ananassa HOM05D006478 ORTHO05D008071 9.7e-21 104.0 112 53.6
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 9.7e-21 104.0 112 53.6
arahy.Tifrunner.gnm1.ann1.LW4644 Arachis hypogaea HOM05D006478 ORTHO05D008071 1.3e-20 103.6 123 49.6
PSO782G1599 Papaver somniferum HOM05D006478 ORTHO05D008071 1.3e-20 103.6 113 49.6
arahy.Tifrunner.gnm1.ann1.R2ZWGQ Arachis hypogaea HOM05D006478 ORTHO05D008071 1.7e-20 103.2 123 48.8
EL10Ac3g05828 Beta vulgaris HOM05D006478 ORTHO05D008071 1.7e-20 103.2 121 47.9
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 1.7e-20 103.2 113 48.7
SalBow5G3546 Salvia bowleyana HOM05D006478 ORTHO05D008071 2.2e-20 102.8 116 48.3
SalBow5G4313 Salvia bowleyana HOM05D006478 ORTHO05D008071 2.2e-20 102.8 116 48.3
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 2.8e-20 102.4 112 53.6
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 3.7e-20 102.1 102 53.9
PSO170G1682 Papaver somniferum HOM05D006478 ORTHO05D008071 3.7e-20 102.1 113 48.7
Psat2g100400 Pisum sativum HOM05D006478 ORTHO05D008071 3.7e-20 102.1 132 45.5
Medtr3g075310 Medicago truncatula HOM05D006478 ORTHO05D008071 4.8e-20 101.7 128 46.1
AUR62002188 Chenopodium quinoa HOM05D006478 ORTHO05D008071 6.3e-20 101.3 121 46.3
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 6.3e-20 101.3 112 50.0
CARHR264290 Cardamine hirsuta HOM05D006478 ORTHO05D008071 1.1e-19 100.5 112 49.1
AUR62015523 Chenopodium quinoa HOM05D006478 ORTHO05D008071 1.4e-19 100.1 120 45.0
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 1.4e-19 100.1 112 50.0
THA.LOC104811518 Tarenaya hassleriana HOM05D006478 ORTHO05D008071 1.8e-19 99.8 110 50.0
Lsat_1_v5_gn_8_8920 Lactuca sativa HOM05D006478 ORTHO05D008071 2.4e-19 99.4 115 51.3
ECA247G1821 Erigeron canadensis HOM05D006478 ORTHO05D008071 4.1e-19 98.6 116 49.1
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 4.1e-19 98.6 111 50.5
Lalb_Chr19g0140371 Lupinus albus HOM05D006478 ORTHO05D008071 6.9e-19 97.8 109 50.5
BcaC04g20665 Brassica carinata HOM05D006478 ORTHO05D008071 9.1e-19 97.4 111 46.8
C09p40820 Brassica napus HOM05D006478 ORTHO05D008071 9.1e-19 97.4 111 46.8
BolC9t56962H Brassica oleracea HOM05D006478 ORTHO05D008071 9.1e-19 97.4 111 46.8
BcaB08g35507 Brassica carinata HOM05D006478 ORTHO05D008071 1.5e-18 96.7 111 45.9
Os10g0508600 Oryza sativa ssp. japonica HOM05D006478 ORTHO05D008071 1.5e-18 96.7 120 44.2
Phvul.011G177900 Phaseolus vulgaris HOM05D006478 ORTHO05D008071 2.6e-18 95.9 135 42.2
Lj6g0019546 Lotus japonicus HOM05D006478 ORTHO05D008071 3.4e-18 95.5 139 42.4
TPR.G3657 Trifolium pratense HOM05D006478 ORTHO05D008071 3.4e-18 95.5 127 44.1
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 4.5e-18 95.1 112 47.3
A10p09440 Brassica napus HOM05D006478 ORTHO05D008071 4.5e-18 95.1 115 46.1
BraA10t43020Z Brassica rapa HOM05D006478 ORTHO05D008071 4.5e-18 95.1 115 46.1
ECA233G2919 Erigeron canadensis HOM05D006478 ORTHO05D008071 5.9e-18 94.7 116 47.4
Glyma.18G235100 Glycine max HOM05D006478 ORTHO05D008071 5.9e-18 94.7 142 42.3
HanXRQChr13g0420601 Helianthus annuus HOM05D006478 ORTHO05D008071 5.9e-18 94.7 121 43.8
Glyma.09G257500 Glycine max HOM05D006478 ORTHO05D008071 1.3e-17 93.6 142 41.5
SGA_v2.0_scaffold10G05491 Striga asiatica HOM05D006478 ORTHO05D008071 2.2e-17 92.8 119 43.7
Zm00001eb043910 Zea mays HOM05D006478 ORTHO05D008071 8.5e-17 90.9 118 44.1
Thecc.07G184100 Theobroma cacao HOM05D006478 ORTHO05D008071 2.5e-16 89.4 106 49.1
Gohir.A01G099000 Gossypium hirsutum HOM05D006478 ORTHO05D008071 5.5e-16 88.2 111 49.5
Duzib213G0671 Durio zibethinus HOM05D006478 ORTHO05D008071 1.2e-15 87.0 107 50.5
Gohir.D01G083500 Gossypium hirsutum HOM05D006478 ORTHO05D008071 3.6e-15 85.5 111 48.6
Gorai.002G109200 Gossypium raimondii HOM05D006478 ORTHO05D008071 3.6e-15 85.5 111 48.6
Ca_03612_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 6.1e-15 84.7 128 39.1
Aa31LG3G7930 Aethionema arabicum HOM05D006478 ORTHO05D008071 7.9e-15 84.3 142 40.8
Hma1.2p1_0654F.1_g196670 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 5.2e-14 81.6 128 39.1
Aqoxy3G03162 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 6.7e-14 81.3 98 45.9
PGSC0003DMG400023983 Solanum tuberosum HOM05D006478 ORTHO05D008071 8.8e-14 80.9 121 41.3
Rhsim09G0192300 Rhododendron simsii HOM05D006478 ORTHO05D008071 1.5e-13 80.1 103 47.6
Haze_13851 Corylus avellana HOM05D006478 ORTHO05D008071 8.2e-12 74.3 121 39.7
Pp3c3_28350 Physcomitrium patens HOM05D006478 ORTHO05D008071 3.5e-10 68.9 129 34.1
Mapoly0022s0103 Marchantia polymorpha HOM05D006478 ORTHO05D008071 1.0e-09 67.4 116 35.3
Manes.03G110816 Manihot esculenta HOM05D006478 ORTHO05D008071 2.2e-09 66.2 49 67.3
Prupe.2G279400 Prunus persica HOM05D006478 ORTHO05D008071 1.6e-07 60.1 71 49.3
Ca_10075_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 6.1e-07 58.2 46 63.0
HPP92_020994 Vanilla planifolia HOM05D006478 ORTHO05D008071 1.0e-06 57.4 66 45.5
RcHm_v2.0_Chr4g0409771 Rosa chinensis HOM05D006478 ORTHO05D008071 1.8e-06 56.6 94 39.4
TAR125G0001 Trochodendron aralioides HOM05D006478 ORTHO05D008071 1.8e-06 56.6 109 35.8
CBR_g39926 Chara braunii HOM05D006478 ORTHO05D008071 3.0e-06 55.8 124 35.5
CAN.G1338.3 Capsicum annuum HOM05D006478 ORTHO05D008071 5.2e-06 55.1 75 36.0
unitig_8.g3700 Utricularia gibba HOM05D006478 ORTHO05D008071 5.2e-06 55.1 112 34.8


User provided reference genes

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