Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0048G009 Amborella trichopoda HOM05D004355 ORTHO05D005228 2.3e-246 855.1 445 100.0
TAR636G0816 Trochodendron aralioides HOM05D004355 ORTHO05D005228 2.3e-52 210.7 482 31.5
TAR633G2000 Trochodendron aralioides HOM05D004355 ORTHO05D005228 6.8e-52 209.1 474 32.7
Nn2g13729 Nelumbo nucifera HOM05D004355 ORTHO05D005228 8.8e-52 208.8 484 32.6
Thecc.05G062900 Theobroma cacao HOM05D004355 ORTHO05D005228 1.2e-51 208.4 450 34.0
Duzib128G1889 Durio zibethinus HOM05D004355 ORTHO05D005228 2.0e-51 207.6 462 33.3
CANSAT80G0576 Cannabis sativa HOM05D004355 ORTHO05D005228 3.4e-51 206.8 478 34.9
COL.COLO4_26990 Corchorus olitorius HOM05D004355 ORTHO05D005228 4.4e-51 206.5 450 34.2
Duzib093G1016 Durio zibethinus HOM05D004355 ORTHO05D005228 6.3e-50 202.6 454 33.3
Lj1g0007988 Lotus japonicus HOM05D004355 ORTHO05D005228 7.0e-49 199.1 463 33.9
Gohir.D04G112100 Gossypium hirsutum HOM05D004355 ORTHO05D005228 1.2e-48 198.4 458 32.8
Sabra06G0099700 Salix brachista HOM05D004355 ORTHO05D005228 3.5e-48 196.8 467 32.5
Aqoxy1G01202 Aquilegia oxysepala HOM05D004355 ORTHO05D005228 5.9e-48 196.1 454 31.5
Duzib106G0643 Durio zibethinus HOM05D004355 ORTHO05D005228 7.7e-48 195.7 456 32.5
Potri.006G126600 Populus trichocarpa HOM05D004355 ORTHO05D005228 7.7e-48 195.7 470 33.2
Sc02g0001740 Simmondsia chinensis HOM05D004355 ORTHO05D005228 1.0e-47 195.3 471 34.8
CiPaw.10G132700 Carya illinoinensis HOM05D004355 ORTHO05D005228 1.3e-47 194.9 466 32.2
Gorai.009G416200 Gossypium raimondii HOM05D004355 ORTHO05D005228 1.3e-47 194.9 458 32.5
Gorai.006G165700 Gossypium raimondii HOM05D004355 ORTHO05D005228 1.7e-47 194.5 456 32.7
Atru.chr8.1850 Acer truncatum HOM05D004355 ORTHO05D005228 2.9e-47 193.7 473 30.2
Hma1.2p1_1099F.1_g256870 Hydrangea macrophylla HOM05D004355 ORTHO05D005228 2.9e-47 193.7 475 32.2
Gohir.A04G073200 Gossypium hirsutum HOM05D004355 ORTHO05D005228 3.8e-47 193.4 450 31.3
Medtr7g101730 Medicago truncatula HOM05D004355 ORTHO05D005228 3.8e-47 193.4 491 31.2
Gohir.A09G148600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 5.0e-47 193.0 446 32.5
Gohir.D09G144400 Gossypium hirsutum HOM05D004355 ORTHO05D005228 5.0e-47 193.0 456 32.5
TAR369G0267 Trochodendron aralioides HOM05D004355 ORTHO05D005228 6.5e-47 192.6 463 30.2
Cpa.g.sc92.114 Carica papaya HOM05D004355 ORTHO05D005228 8.5e-47 192.2 480 31.2
PSO339G4715 Papaver somniferum HOM05D004355 ORTHO05D005228 2.5e-46 190.7 473 30.0
VMungo1383G3555 Vigna mungo HOM05D004355 ORTHO05D005228 9.4e-46 188.7 473 32.6
Cfa017577 Carpinus fangiana HOM05D004355 ORTHO05D005228 1.6e-45 188.0 473 31.7
Psat3g043400 Pisum sativum HOM05D004355 ORTHO05D005228 1.6e-45 188.0 480 30.8
CsaV3_6G039740 Cucumis sativus L. HOM05D004355 ORTHO05D005228 2.7e-45 187.2 476 32.1
Manes.08G008600 Manihot esculenta HOM05D004355 ORTHO05D005228 2.7e-45 187.2 475 31.2
Dinv35767 Davidia involucrata HOM05D004355 ORTHO05D003235 6.1e-45 186.0 462 30.5
Sed0019590 Sechium edule HOM05D004355 ORTHO05D005228 6.1e-45 186.0 471 31.4
Gohir.A01G139600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 1.0e-44 185.3 464 32.1
Glyma.03G182000 Glycine max HOM05D004355 ORTHO05D005228 1.4e-44 184.9 474 31.4
Prupe.6G235000 Prunus persica HOM05D004355 ORTHO05D005228 1.4e-44 184.9 457 31.9
Haze_20575 Corylus avellana HOM05D004355 ORTHO05D005228 1.8e-44 184.5 470 31.5
AUR62039881 Chenopodium quinoa HOM05D004355 ORTHO05D005228 2.3e-44 184.1 447 33.1
Glyma.19G182500 Glycine max HOM05D004355 ORTHO05D005228 3.0e-44 183.7 472 31.4
Aa31LG5G22300 Aethionema arabicum HOM05D004355 ORTHO05D005228 4.0e-44 183.3 471 31.4
MELO3C009345.2 Cucumis melo HOM05D004355 ORTHO05D005228 5.2e-44 183.0 470 31.7
MELO3C014220.2 Cucumis melo HOM05D004355 ORTHO05D005228 6.8e-44 182.6 476 31.1
ECA248G2910 Erigeron canadensis HOM05D004355 ORTHO05D005228 6.8e-44 182.6 434 31.8
Manes.09G063900 Manihot esculenta HOM05D004355 ORTHO05D005228 6.8e-44 182.6 473 30.7
Ciclev10011674m.g Citrus clementina HOM05D004355 ORTHO05D005228 8.8e-44 182.2 468 32.1
Phvul.001G178100 Phaseolus vulgaris HOM05D004355 ORTHO05D005228 1.5e-43 181.4 475 32.0
Lalb_Chr25g0289061 Lupinus albus HOM05D004355 ORTHO05D005228 2.0e-43 181.0 472 32.2
QL07p044062 Quercus lobata HOM05D004355 ORTHO05D005228 2.0e-43 181.0 495 29.5
THA.LOC104806491 Tarenaya hassleriana HOM05D004355 ORTHO05D005228 2.0e-43 181.0 470 31.7
CSS0033330 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 2.6e-43 180.6 484 31.4
Lalb_Chr01g0018741 Lupinus albus HOM05D004355 ORTHO05D005228 2.6e-43 180.6 478 30.3
CSS0012498 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 4.4e-43 179.9 461 30.4
CSS0041806 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 4.4e-43 179.9 482 31.1
CsaV3_3G035850 Cucumis sativus L. HOM05D004355 ORTHO05D005228 4.4e-43 179.9 470 31.3
Gohir.D01G128600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 4.4e-43 179.9 462 31.6
THA.LOC104823460 Tarenaya hassleriana HOM05D004355 ORTHO05D005228 5.7e-43 179.5 468 30.1
FAN05G2251 Fragaria x ananassa HOM05D004355 ORTHO05D005228 1.3e-42 178.3 443 31.8
MD04G1095900 Malus domestica HOM05D004355 ORTHO05D005228 1.3e-42 178.3 462 31.6
TPR.G9373 Trifolium pratense HOM05D004355 ORTHO05D005228 1.3e-42 178.3 495 29.9
TWI77G0715 Tripterygium wilfordii HOM05D004355 ORTHO05D005228 1.3e-42 178.3 488 29.9
Ca_08851_v3 Cicer arietinum L. HOM05D004355 ORTHO05D005228 1.7e-42 177.9 488 29.3
ClCG04G009160 Citrullus lanatus HOM05D004355 ORTHO05D005228 1.7e-42 177.9 466 31.1
AL4G33360 Arabidopsis lyrata HOM05D004355 ORTHO05D005228 3.7e-42 176.8 465 31.4
HanXRQChr11g0350251 Helianthus annuus HOM05D004355 ORTHO05D005228 3.7e-42 176.8 449 31.0
AUR62040465 Chenopodium quinoa HOM05D004355 ORTHO05D005228 8.3e-42 175.6 268 38.1
Nitab4.5_0002963g0100 Nicotiana tabacum HOM05D004355 ORTHO05D005228 1.4e-41 174.9 461 31.2
TWI74G0762 Tripterygium wilfordii HOM05D004355 ORTHO05D005228 1.4e-41 174.9 482 29.9
DCAR_009301 Daucus carota HOM05D004355 ORTHO05D005228 4.1e-41 173.3 469 30.3
Ah.08g211740 Amaranthus hybridus HOM05D004355 ORTHO05D005228 9.1e-41 172.2 428 31.8
Potri.016G091400 Populus trichocarpa HOM05D004355 ORTHO05D005228 5.9e-40 169.5 490 30.0
FvH4_6g16100 Fragaria vesca HOM05D004355 ORTHO05D005228 1.3e-39 168.3 448 31.5
FAN02G3539 Fragaria x ananassa HOM05D004355 ORTHO05D005228 1.3e-39 168.3 446 30.7
ClCG10G020240 Citrullus lanatus HOM05D004355 ORTHO05D005228 1.7e-39 167.9 456 30.7
ECA233G2716 Erigeron canadensis HOM05D004355 ORTHO05D005228 1.7e-39 167.9 438 31.3
HanXRQChr13g0399881 Helianthus annuus HOM05D004355 ORTHO05D005228 1.7e-39 167.9 474 29.7
Rhsim05G0179400 Rhododendron simsii HOM05D004355 ORTHO05D005228 1.7e-39 167.9 463 30.5
PGR004G0459 Punica granatum HOM05D004355 ORTHO05D005228 2.9e-39 167.2 453 32.0
A05p08800 Brassica napus HOM05D004355 ORTHO05D005228 6.6e-39 166.0 465 30.5
BraA05t19847Z Brassica rapa HOM05D004355 ORTHO05D005228 6.6e-39 166.0 465 30.8
EL10Ac7g16576 Beta vulgaris HOM05D004355 ORTHO05D005228 1.5e-38 164.9 430 31.6
Sabra16G0096600 Salix brachista HOM05D004355 ORTHO05D005228 2.5e-38 164.1 267 35.6
Migut.L01688 Erythranthe guttata HOM05D004355 ORTHO05D005228 3.3e-38 163.7 465 28.8
vmacro08776 Vaccinium macrocarpon HOM05D004355 ORTHO05D005228 1.6e-37 161.4 520 28.7
Dinv37299 Davidia involucrata HOM05D004355 ORTHO05D005228 4.7e-37 159.8 257 36.6
Eucgr.A01137 Eucalyptus grandis HOM05D004355 ORTHO05D005228 4.7e-37 159.8 262 36.6
Gorai.002G162400 Gossypium raimondii HOM05D004355 ORTHO05D005228 4.7e-37 159.8 397 33.2
Rhsim04G0145100 Rhododendron simsii HOM05D004355 ORTHO05D005228 4.7e-37 159.8 278 34.9
RcHm_v2.0_Chr3g0469941 Rosa chinensis HOM05D004355 ORTHO05D005228 1.0e-36 158.7 246 36.6
PGSC0003DMG400035240 Solanum tuberosum HOM05D004355 ORTHO05D005228 1.0e-36 158.7 471 28.5
Cc06_g04030 Coffea canephora HOM05D004355 ORTHO05D005228 1.4e-36 158.3 475 28.4
BolC4t22685H Brassica oleracea HOM05D004355 ORTHO05D005228 1.8e-36 157.9 469 28.8
BcaC02g11829 Brassica carinata HOM05D004355 ORTHO05D005228 3.0e-36 157.1 469 28.6
C04p10920 Brassica napus HOM05D004355 ORTHO05D005228 6.8e-36 156.0 469 28.6
FAN14G0897 Fragaria x ananassa HOM05D004355 ORTHO05D005228 1.2e-35 155.2 246 35.4
FAN14G5907 Fragaria x ananassa HOM05D004355 ORTHO05D005228 1.2e-35 155.2 246 35.4
Actinidia19660 Actinidia chinensis HOM05D004355 ORTHO05D005228 2.0e-35 154.5 445 28.5
vmacro20020 Vaccinium macrocarpon HOM05D004355 ORTHO05D005228 2.6e-35 154.1 481 28.7
Sopen09g002770 Solanum pennellii HOM05D004355 ORTHO05D005228 3.4e-35 153.7 438 28.5
Solyc09g007950.3 Solanum lycopersicum HOM05D004355 ORTHO05D005228 7.5e-35 152.5 438 28.5
Nitab4.5_0000101g0300 Nicotiana tabacum HOM05D004355 ORTHO05D005228 4.9e-34 149.8 427 30.0
GSVIVG01025706001 Vitis vinifera HOM05D004355 ORTHO05D005228 4.9e-34 149.8 252 35.3
SGA_v2.0_scaffold75G24855 Striga asiatica HOM05D004355 ORTHO05D005228 1.4e-33 148.3 459 27.0
Lsat_1_v5_gn_1_53141 Lactuca sativa HOM05D004355 ORTHO05D005228 3.2e-33 147.1 372 31.5
AT2G37035 Arabidopsis thaliana HOM05D004355 ORTHO05D005228 7.0e-33 146.0 470 28.1
PGR004G2422 Punica granatum HOM05D004355 ORTHO05D005228 3.5e-32 143.7 448 29.0
SalBow5G3882 Salvia bowleyana HOM05D004355 ORTHO05D005228 5.9e-32 142.9 459 26.1
SalBow5G3919 Salvia bowleyana HOM05D004355 ORTHO05D005228 5.9e-32 142.9 459 26.1
Sp4g19340 Schrenkiella parvula HOM05D004355 ORTHO05D005228 5.9e-32 142.9 453 29.1
Sed0012541 Sechium edule HOM05D004355 ORTHO05D005228 7.8e-32 142.5 444 30.4
MSTRG.26701 Avicennia marina HOM05D004355 ORTHO05D005228 2.3e-31 141.0 463 27.4
Lsat_1_v5_gn_6_31260 Lactuca sativa HOM05D004355 ORTHO05D005228 2.3e-31 141.0 447 28.0
Carub.0004s1891 Capsella rubella HOM05D004355 ORTHO05D005228 8.6e-31 139.0 474 27.4
Lj2P114T36 Lonicera japonica HOM05D004355 ORTHO05D005228 1.1e-30 138.7 262 31.7
CARHR131530 Cardamine hirsuta HOM05D004355 ORTHO05D005228 1.5e-30 138.3 468 28.8
Migut.J00528 Erythranthe guttata HOM05D004355 ORTHO05D005228 1.6e-29 134.8 460 25.9
unitig_746.g26764 Utricularia gibba HOM05D004355 ORTHO05D005228 2.8e-29 134.0 387 28.7
unitig_899.g15220 Utricularia gibba HOM05D002910 ORTHO05D003235 4.7e-29 133.3 459 26.6
Lsat_1_v5_gn_6_31300 Lactuca sativa HOM05D004355 ORTHO05D005228 6.2e-29 132.9 440 27.3
Peaxi162Scf00123g01123 Petunia axillaris HOM05D004355 ORTHO05D005228 3.4e-27 127.1 267 32.2
SEGI_02022 Sequoiadendron giganteum HOM05D004355 ORTHO05D005228 1.3e-26 125.2 181 37.0
Zm00001eb221710 Zea mays HOM05D004355 ORTHO05D005228 1.1e-25 122.1 261 31.8
Zm00001eb045770 Zea mays HOM05D004355 ORTHO05D005228 1.9e-25 121.3 257 31.1
Os10g0478400 Oryza sativa ssp. japonica HOM05D004355 ORTHO05D005228 4.1e-25 120.2 446 28.0
MD12G1115900 Malus domestica HOM05D004355 ORTHO05D005228 8.6e-23 112.5 439 28.5
ECA233G2931 Erigeron canadensis HOM05D004355 ORTHO05D005228 4.7e-21 106.7 218 31.2
SEGI_31737 Sequoiadendron giganteum HOM05D004355 ORTHO05D005228 1.1e-20 105.5 269 29.0
CiPaw.09G174200 Carya illinoinensis HOM05D004355 ORTHO05D005228 6.8e-20 102.8 443 26.2
Lsat_1_v5_gn_6_31200 Lactuca sativa HOM05D004355 ORTHO05D005228 1.3e-18 98.6 430 23.0
Lsat_1_v5_gn_6_70860 Lactuca sativa HOM05D004355 ORTHO05D005228 3.7e-18 97.1 390 24.6
ECA233G2161 Erigeron canadensis HOM05D004355 ORTHO05D005228 6.4e-18 96.3 256 28.5
Actinidia31337 Actinidia chinensis HOM05D004355 ORTHO05D005228 1.7e-15 88.2 142 33.8
FAN09G2012 Fragaria x ananassa HOM05D004355 ORTHO05D005228 2.3e-15 87.8 353 27.8
CDE04G2254 Ceratophyllum demersum HOM05D004355 ORTHO05D005228 3.0e-15 87.4 301 27.9
CDE06G0791 Ceratophyllum demersum HOM05D004355 ORTHO05D005228 2.1e-13 81.3 309 28.8
ECA233G3839 Erigeron canadensis HOM05D004355 ORTHO05D005228 3.1e-12 77.4 293 23.9
FAN09G2758 Fragaria x ananassa HOM05D004355 ORTHO05D005228 3.1e-12 77.4 101 35.6
Pp3c13_8770 Physcomitrium patens HOM05D004355 ORTHO05D005228 3.2e-09 67.4 247 25.5
HPP92_015190 Vanilla planifolia HOM05D004355 ORTHO05D005228 7.1e-09 66.2 92 35.9
Sc02g0001720 Simmondsia chinensis HOM05D004355 ORTHO05D005228 9.2e-09 65.9 79 39.2
VMungo0540G2091 Vigna mungo HOM05D004355 ORTHO05D005228 3.3e-06 57.4 114 31.6


User provided reference genes

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