Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0043G038 Amborella trichopoda HOM05D001145 ORTHO05D001415 3.3e-35 151.0 67 100.0
ATR0043G010 Amborella trichopoda HOM05D001145 ORTHO05D001415 5.1e-28 127.1 62 90.3
Potri.004G217200 Populus trichocarpa HOM05D001145 ORTHO05D001415 3.3e-27 124.4 63 84.1
CANSAT64G1016 Cannabis sativa HOM05D001145 ORTHO05D001415 4.3e-27 124.0 62 87.1
CDE07G1511 Ceratophyllum demersum HOM05D001145 ORTHO05D001415 4.3e-27 124.0 63 85.7
Cc01_g10220 Coffea canephora HOM05D001145 ORTHO05D001415 4.3e-27 124.0 61 88.5
Manes.04G012500 Manihot esculenta HOM05D001145 ORTHO05D001415 7.3e-27 123.2 61 88.5
Aqoxy2G01627 Aquilegia oxysepala HOM05D001145 ORTHO05D001415 9.6e-27 122.9 62 87.1
Ciclev10028147m.g Citrus clementina HOM05D001145 ORTHO05D001415 9.6e-27 122.9 62 85.5
Hma1.2p1_0772F.1_g215990 Hydrangea macrophylla HOM05D001145 ORTHO05D001415 9.6e-27 122.9 62 83.9
Hma1.2p1_0772F.1_g216000 Hydrangea macrophylla HOM05D001145 ORTHO05D001415 9.6e-27 122.9 62 83.9
Prupe.6G113600 Prunus persica HOM05D001145 ORTHO05D001415 1.3e-26 122.5 61 86.9
Rhsim13G0101100 Rhododendron simsii HOM05D001145 ORTHO05D001415 1.3e-26 122.5 61 86.9
TWI75G1305 Tripterygium wilfordii HOM05D001145 ORTHO05D001415 1.3e-26 122.5 61 86.9
Haze_23528 Corylus avellana HOM05D001145 ORTHO05D001415 1.6e-26 122.1 62 83.9
FvH4_3g30560 Fragaria vesca HOM05D001145 ORTHO05D001415 1.6e-26 122.1 61 85.2
FAN11G1509 Fragaria x ananassa HOM05D001145 ORTHO05D001415 1.6e-26 122.1 61 85.2
FAN21G3468 Fragaria x ananassa HOM05D001145 ORTHO05D001415 1.6e-26 122.1 61 85.2
Lj2A1005T32 Lonicera japonica HOM05D001145 ORTHO05D001415 1.6e-26 122.1 62 82.3
TAR633G2303 Trochodendron aralioides HOM05D001145 ORTHO05D001415 1.6e-26 122.1 62 85.5
GSVIVG01031457001 Vitis vinifera HOM05D001145 ORTHO05D001415 1.6e-26 122.1 61 86.9
Cpa.g.sc47.4 Carica papaya HOM05D001145 ORTHO05D001415 2.1e-26 121.7 62 85.5
CiPaw.13G144900 Carya illinoinensis HOM05D001145 ORTHO05D001415 2.1e-26 121.7 62 83.9
ECA248G1672 Erigeron canadensis HOM05D001145 ORTHO05D001415 2.1e-26 121.7 62 83.9
Lj1C213G3 Lonicera japonica HOM05D001145 ORTHO05D001415 2.1e-26 121.7 62 83.9
PGR102G3025 Punica granatum HOM05D001145 ORTHO05D001415 2.1e-26 121.7 61 85.2
RcHm_v2.0_Chr5g0056561 Rosa chinensis HOM05D001145 ORTHO05D001415 2.1e-26 121.7 61 85.2
DCAR_022680 Daucus carota HOM05D001145 ORTHO05D001415 3.6e-26 120.9 62 83.9
SalBow6G5394 Salvia bowleyana HOM05D001145 ORTHO05D001415 3.6e-26 120.9 61 85.2
CSS0024763 Camellia sinensis var. sinensis HOM05D001145 ORTHO05D001415 4.8e-26 120.6 61 85.2
CSS0032816 Camellia sinensis var. sinensis HOM05D001145 ORTHO05D001415 4.8e-26 120.6 61 85.2
Dinv16229 Davidia involucrata HOM05D001145 ORTHO05D001415 4.8e-26 120.6 62 83.9
Lsat_1_v5_gn_1_64901 Lactuca sativa HOM05D001145 ORTHO05D001415 4.8e-26 120.6 62 82.3
Actinidia24152 Actinidia chinensis HOM05D001145 ORTHO05D001415 6.2e-26 120.2 60 85.0
MSTRG.21084 Avicennia marina HOM05D001145 ORTHO05D001415 6.2e-26 120.2 61 83.6
COL.COLO4_19206 Corchorus olitorius HOM05D001145 ORTHO05D001415 8.1e-26 119.8 62 83.9
CiPaw.14G107000 Carya illinoinensis HOM05D001145 ORTHO05D001415 1.1e-25 119.4 61 83.6
QL01p014896 Quercus lobata HOM05D001145 ORTHO05D001415 1.1e-25 119.4 62 83.9
SGA_v2.0_scaffold27G11573 Striga asiatica HOM05D001145 ORTHO05D001415 1.1e-25 119.4 63 81.0
Cfa010142 Carpinus fangiana HOM05D001145 ORTHO05D001415 1.4e-25 119.0 62 82.3
Eucgr.B03924 Eucalyptus grandis HOM05D001145 ORTHO05D001415 1.8e-25 118.6 62 82.3
unitig_0.g1496 Utricularia gibba HOM05D001145 ORTHO05D001415 1.8e-25 118.6 61 82.0
HPP92_008396 Vanilla planifolia HOM05D001145 ORTHO05D001415 1.8e-25 118.6 61 85.2
Migut.D02297 Erythranthe guttata HOM05D001145 ORTHO05D001415 2.4e-25 118.2 61 83.6
Sc21g0000340 Simmondsia chinensis HOM05D001145 ORTHO05D001415 2.4e-25 118.2 61 83.6
THA.LOC104810883 Tarenaya hassleriana HOM05D001145 ORTHO05D001415 2.4e-25 118.2 62 80.6
HanXRQChr11g0346011 Helianthus annuus HOM05D001145 ORTHO05D001415 3.1e-25 117.9 59 86.4
Atru.chr3.3503 Acer truncatum HOM05D001145 ORTHO05D001415 4.0e-25 117.5 61 82.0
AagrBONN_evm.TU.Sc2ySwM_228.4808 Anthoceros agrestis HOM05D001145 ORTHO05D001415 4.0e-25 117.5 61 85.2
vmacro03252 Vaccinium macrocarpon HOM05D001145 ORTHO05D001415 4.0e-25 117.5 63 82.5
Cfa010140 Carpinus fangiana HOM05D001145 ORTHO05D001415 5.3e-25 117.1 62 80.6
SEGI_32230 Sequoiadendron giganteum HOM05D001145 ORTHO05D001415 5.3e-25 117.1 61 80.3
unitig_747.g21970 Utricularia gibba HOM05D001145 ORTHO05D001415 5.3e-25 117.1 61 82.0
AL5G23340 Arabidopsis lyrata HOM05D001145 ORTHO05D001415 6.9e-25 116.7 62 80.6
BcaB05g23052 Brassica carinata HOM05D001145 ORTHO05D001415 6.9e-25 116.7 62 80.6
BcaC09g49659 Brassica carinata HOM05D001145 ORTHO05D001415 6.9e-25 116.7 62 80.6
A01p26740 Brassica napus HOM05D001145 ORTHO05D001415 6.9e-25 116.7 62 80.6
C01p34130 Brassica napus HOM05D001145 ORTHO05D001415 6.9e-25 116.7 62 80.6
BolC1t03382H Brassica oleracea HOM05D001145 ORTHO05D001415 6.9e-25 116.7 62 80.6
BraA01t02603Z Brassica rapa HOM05D001145 ORTHO05D001415 6.9e-25 116.7 62 80.6
ClCG01G013870 Citrullus lanatus HOM05D001145 ORTHO05D001415 6.9e-25 116.7 59 84.7
MELO3C004867.2 Cucumis melo HOM05D001145 ORTHO05D001415 6.9e-25 116.7 59 84.7
CsaV3_1G014120 Cucumis sativus L. HOM05D001145 ORTHO05D001415 6.9e-25 116.7 59 84.7
Thhalv10002475m.g Eutrema salsugineum HOM05D001145 ORTHO05D001415 6.9e-25 116.7 62 80.6
Phvul.011G086700 Phaseolus vulgaris HOM05D001145 ORTHO05D001415 6.9e-25 116.7 61 82.0
Sp5g16340 Schrenkiella parvula HOM05D001145 ORTHO05D001415 6.9e-25 116.7 62 80.6
Aa31LG4G14210 Aethionema arabicum HOM05D001145 ORTHO05D001415 9.0e-25 116.3 62 79.0
Ah.01g014130 Amaranthus hybridus HOM05D001145 ORTHO05D001415 9.0e-25 116.3 61 83.6
Duzib150G0254 Durio zibethinus HOM05D001145 ORTHO05D001415 9.0e-25 116.3 62 79.0
Ca_19325_v3 Cicer arietinum L. HOM05D001145 ORTHO05D001415 1.2e-24 115.9 61 80.3
Nn2g13867 Nelumbo nucifera HOM05D001145 ORTHO05D001415 1.2e-24 115.9 61 82.0
Sed0024158 Sechium edule HOM05D001145 ORTHO05D001415 1.2e-24 115.9 59 84.7
Solyc11g066440.2 Solanum lycopersicum HOM05D001145 ORTHO05D001415 1.2e-24 115.9 61 82.0
Sopen11g026190 Solanum pennellii HOM05D001145 ORTHO05D001415 1.2e-24 115.9 61 82.0
PGSC0003DMG400000457 Solanum tuberosum HOM05D001145 ORTHO05D001415 1.2e-24 115.9 61 82.0
AT3G44880 Arabidopsis thaliana HOM05D001145 ORTHO05D001415 1.5e-24 115.5 62 79.0
arahy.Tifrunner.gnm1.ann1.4585DL Arachis hypogaea HOM05D001145 ORTHO05D001415 1.5e-24 115.5 61 80.3
arahy.Tifrunner.gnm1.ann1.H5NNU3 Arachis hypogaea HOM05D001145 ORTHO05D001415 1.5e-24 115.5 61 80.3
Carub.0005s1062 Capsella rubella HOM05D001145 ORTHO05D001415 1.5e-24 115.5 62 79.0
CAN.G546.53 Capsicum annuum HOM05D001145 ORTHO05D001415 1.5e-24 115.5 61 82.0
CARHR151160 Cardamine hirsuta HOM05D001145 ORTHO05D001415 1.5e-24 115.5 62 79.0
Duzib150G0831 Durio zibethinus HOM05D001145 ORTHO05D001415 1.5e-24 115.5 62 79.0
Glyma.11G192300 Glycine max HOM05D001145 ORTHO05D001415 1.5e-24 115.5 61 80.3
Glyma.12G082100 Glycine max HOM05D001145 ORTHO05D001415 1.5e-24 115.5 61 80.3
MD11G1149200 Malus domestica HOM05D001145 ORTHO05D001415 1.5e-24 115.5 61 82.0
VMungo1127G2205 Vigna mungo HOM05D001145 ORTHO05D001415 1.5e-24 115.5 61 80.3
EL10Ac9g22627 Beta vulgaris HOM05D001145 ORTHO05D001415 2.0e-24 115.2 60 83.3
AUR62014978 Chenopodium quinoa HOM05D001145 ORTHO05D001415 2.0e-24 115.2 61 82.0
AUR62029149 Chenopodium quinoa HOM05D001145 ORTHO05D001415 2.0e-24 115.2 61 82.0
Gohir.A07G105000 Gossypium hirsutum HOM05D001145 ORTHO05D001415 2.6e-24 114.8 62 80.6
Gohir.D07G109100 Gossypium hirsutum HOM05D001145 ORTHO05D001415 2.6e-24 114.8 62 80.6
Gorai.001G117200 Gossypium raimondii HOM05D001145 ORTHO05D001415 2.6e-24 114.8 62 80.6
Psat7g223720 Pisum sativum HOM05D001145 ORTHO05D001415 2.6e-24 114.8 61 78.7
Nitab4.5_0000173g0160 Nicotiana tabacum HOM05D001145 ORTHO05D001415 3.4e-24 114.4 61 80.3
Nitab4.5_0009628g0010 Nicotiana tabacum HOM05D001145 ORTHO05D001415 3.4e-24 114.4 61 80.3
Peaxi162Scf00983g00004 Petunia axillaris HOM05D001145 ORTHO05D001415 3.4e-24 114.4 61 80.3
Lalb_Chr01g0004621 Lupinus albus HOM05D001145 ORTHO05D001415 7.6e-24 113.2 59 81.4
Lj3g0004371 Lotus japonicus HOM05D001145 ORTHO05D001415 9.9e-24 112.8 61 78.7
Os03g0146400 Oryza sativa ssp. japonica HOM05D001145 ORTHO05D001415 9.9e-24 112.8 61 82.0
Thecc.09G298000 Theobroma cacao HOM05D001145 ORTHO05D001415 1.3e-23 112.5 62 79.0
TPR.G36804 Trifolium pratense HOM05D001145 ORTHO05D001415 1.3e-23 112.5 61 77.0
Medtr4g057200 Medicago truncatula HOM05D001145 ORTHO05D001415 1.7e-23 112.1 61 77.0
Zm00001eb003760 Zea mays HOM05D001145 ORTHO05D001415 6.4e-23 110.2 59 81.4
PSO339G1579 Papaver somniferum HOM05D001145 ORTHO05D001415 8.4e-23 109.8 61 78.7
PSO801G0093 Papaver somniferum HOM05D001145 ORTHO05D001415 8.4e-23 109.8 61 78.7
Pp3c1_40790 Physcomitrium patens HOM05D001145 ORTHO05D001415 1.1e-22 109.4 59 81.4
Mapoly0046s0012 Marchantia polymorpha HOM05D001145 ORTHO05D001415 1.4e-22 109.0 59 78.0
Pp3c3_19130 Physcomitrium patens HOM05D001145 ORTHO05D001415 3.2e-22 107.8 59 79.7
SMO139G0147 Selaginella moellendorffii HOM05D001145 ORTHO05D001415 3.2e-22 107.8 69 72.5
Lsat_1_v5_gn_1_64861 Lactuca sativa HOM05D001145 ORTHO05D001415 2.5e-19 98.2 62 71.0
Sabra04G0147900 Salix brachista HOM05D001145 ORTHO05D001415 8.1e-18 93.2 121 43.0
CsaV3_1G014100 Cucumis sativus L. HOM05D001145 ORTHO05D001415 3.4e-16 87.8 54 70.4
Potri.009G004100 Populus trichocarpa HOM05D001145 ORTHO05D001415 2.2e-15 85.1 57 70.2
Oeu034670.1 Olea europaea HOM05D001145 ORTHO05D001415 2.0e-08 62.0 29 86.2
AUR62029155 Chenopodium quinoa HOM05D001145 ORTHO05D001415 4.5e-08 60.8 33 78.8
Haze_23533 Corylus avellana HOM05D001145 ORTHO05D001415 1.0e-07 59.7 35 71.4


User provided reference genes

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