Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 5.6e-81 304.3 162 100.0
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 3.6e-72 275.0 160 89.4
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 6.9e-71 270.8 161 87.0
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 2.6e-70 268.9 163 88.3
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 4.5e-70 268.1 162 85.8
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 5.8e-70 267.7 162 86.4
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 5.8e-70 267.7 159 88.7
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 7.6e-70 267.3 162 87.0
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 7.6e-70 267.3 162 87.0
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 7.6e-70 267.3 159 88.7
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 1.3e-69 266.5 161 87.0
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 1.7e-69 266.2 161 87.6
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 6.4e-69 264.2 159 87.4
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 6.4e-69 264.2 159 86.8
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 8.4e-69 263.8 161 86.3
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 1.1e-68 263.5 159 86.2
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 1.9e-68 262.7 162 84.0
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 1.9e-68 262.7 162 85.8
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 2.4e-68 262.3 159 84.9
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 2.4e-68 262.3 162 85.2
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 2.4e-68 262.3 160 86.2
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 3.2e-68 261.9 161 84.5
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 4.2e-68 261.5 161 85.1
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 5.5e-68 261.2 160 85.6
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 7.1e-68 260.8 161 83.9
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 7.1e-68 260.8 160 86.2
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 7.1e-68 260.8 160 86.2
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 9.3e-68 260.4 161 83.2
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 1.2e-67 260.0 162 81.5
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 1.6e-67 259.6 160 86.2
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 1.6e-67 259.6 159 85.5
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 2.1e-67 259.2 162 84.6
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 2.1e-67 259.2 161 83.9
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 3.5e-67 258.5 160 86.2
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 3.5e-67 258.5 161 83.2
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 4.6e-67 258.1 162 85.2
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 6.0e-67 257.7 159 82.4
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 7.9e-67 257.3 159 84.9
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 1.0e-66 256.9 160 85.6
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 1.3e-66 256.5 160 83.1
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 1.8e-66 256.1 162 82.1
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 1.8e-66 256.1 161 82.0
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 2.3e-66 255.8 160 83.8
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 2.3e-66 255.8 148 91.2
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 2.3e-66 255.8 159 83.6
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 3.0e-66 255.4 160 81.9
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 3.0e-66 255.4 159 83.6
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 3.9e-66 255.0 159 81.8
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 3.9e-66 255.0 160 82.5
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 5.1e-66 254.6 159 82.4
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 5.1e-66 254.6 160 83.1
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 5.1e-66 254.6 178 77.0
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 6.7e-66 254.2 162 81.5
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 1.1e-65 253.4 159 82.4
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 1.1e-65 253.4 159 82.4
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 1.1e-65 253.4 159 82.4
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 1.1e-65 253.4 159 82.4
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 1.5e-65 253.1 161 83.2
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 1.5e-65 253.1 159 81.8
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 1.5e-65 253.1 159 81.8
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 1.9e-65 252.7 162 80.2
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 4.3e-65 251.5 162 79.0
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 4.3e-65 251.5 159 79.9
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 5.6e-65 251.1 161 78.9
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 5.6e-65 251.1 159 81.8
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 5.6e-65 251.1 159 81.8
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 5.6e-65 251.1 161 82.6
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 5.6e-65 251.1 162 79.0
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 5.6e-65 251.1 162 79.0
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 1.3e-64 250.0 159 80.5
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 1.3e-64 250.0 162 79.0
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 1.3e-64 250.0 160 78.1
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 1.6e-64 249.6 159 78.6
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 1.6e-64 249.6 162 81.5
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 2.1e-64 249.2 162 80.9
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 2.1e-64 249.2 159 79.9
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 1.1e-63 246.9 159 79.2
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 1.4e-63 246.5 153 83.7
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 1.4e-63 246.5 154 81.8
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 1.8e-63 246.1 159 80.5
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 4.0e-63 245.0 159 76.7
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 9.0e-63 243.8 161 80.7
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 1.5e-62 243.0 160 80.6
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.5e-62 243.0 160 80.6
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.5e-62 243.0 160 80.6
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.5e-62 243.0 160 80.6
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 1.5e-62 243.0 159 79.2
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 2.0e-62 242.7 161 80.7
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 2.6e-62 242.3 160 78.8
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 2.6e-62 242.3 160 76.2
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 3.4e-62 241.9 160 80.0
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 4.5e-62 241.5 161 80.7
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 5.8e-62 241.1 160 79.4
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 2.9e-61 238.8 161 78.9
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 1.4e-60 236.5 160 76.9
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 5.1e-58 228.0 137 88.3
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 6.7e-58 227.6 156 76.3
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 1.9e-57 226.1 161 69.6
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 1.3e-48 196.8 161 60.2
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 4.8e-48 194.9 161 57.8
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 3.2e-44 182.2 157 57.3
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 3.0e-42 175.6 105 86.7
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 5.7e-41 171.4 156 55.8
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 5.7e-41 171.4 156 55.8
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 7.4e-41 171.0 156 55.8
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 7.4e-41 171.0 156 55.8
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 9.1e-39 164.1 103 84.5
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 1.2e-38 163.7 159 52.8
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 2.6e-38 162.5 102 81.4
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 5.9e-38 161.4 94 89.4
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 2.7e-35 152.5 103 80.6
Thhalv10023194m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 5.1e-34 148.3 102 76.5
Actinidia24149 Actinidia chinensis HOM05D006252 ORTHO05D007909 3.5e-30 135.6 140 59.3
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 2.2e-29 132.9 90 80.0
SEGI_37172 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 2.1e-27 126.3 88 70.5
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 1.4e-23 113.6 71 83.1
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 7.7e-22 107.8 149 40.3
MCO03G269 Micromonas commoda HOM05D006252 ORTHO05D007909 8.5e-21 104.4 155 36.1
arahy.Tifrunner.gnm1.ann1.KIT0HG Arachis hypogaea HOM05D006252 ORTHO05D007909 4.0e-18 95.5 88 61.4
PRCOL_00001763 Prasinoderma coloniale HOM05D006252 ORTHO05D007909 5.2e-18 95.1 162 34.0
SEGI_26717 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 3.4e-17 92.4 72 63.9
Oeu007731.1 Olea europaea HOM05D006252 ORTHO05D007909 4.8e-16 88.6 58 75.9
Haze_24362 Corylus avellana HOM05D006252 ORTHO05D007909 1.6e-14 83.6 57 75.4
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 6.1e-11 71.6 156 32.1
arahy.Tifrunner.gnm1.ann1.TR51Z4 Arachis hypogaea HOM05D006252 ORTHO05D007909 1.4e-10 70.5 44 75.0
MELO3C029084.2 Cucumis melo HOM05D006252 ORTHO05D007909 4.0e-10 68.9 59 61.0
arahy.Tifrunner.gnm1.ann1.LGS4T1 Arachis hypogaea HOM05D006252 ORTHO05D007909 5.4e-07 58.5 103 42.7


User provided reference genes

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