Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 0.0e+00 1238.8 646 100.0
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 2.6e-214 749.2 578 63.7
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 3.4e-214 748.8 577 64.3
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 4.2e-212 741.9 581 63.0
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 7.9e-211 737.6 574 64.1
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 1.8e-210 736.5 585 62.1
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 1.8e-210 736.5 571 64.4
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 1.8e-210 736.5 575 63.1
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 2.3e-210 736.1 574 63.1
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 5.1e-210 734.9 573 63.0
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 2.5e-209 732.6 577 64.1
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 1.3e-208 730.3 576 62.5
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 1.3e-208 730.3 571 63.4
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 3.7e-208 728.8 570 61.9
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 4.8e-208 728.4 573 62.1
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 1.4e-207 726.9 575 61.7
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 2.4e-207 726.1 567 62.1
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 3.1e-207 725.7 567 62.8
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 1.2e-206 723.8 579 62.0
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 1.2e-206 723.8 575 60.9
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 1.5e-206 723.4 572 62.9
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 1.5e-206 723.4 572 62.9
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 3.4e-206 722.2 572 62.6
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 5.9e-206 721.5 584 61.5
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 7.7e-206 721.1 575 60.7
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 1.7e-205 719.9 572 63.3
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 6.5e-205 718.0 582 61.5
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 8.5e-205 717.6 569 62.6
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 2.5e-204 716.1 580 59.7
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 5.5e-204 714.9 569 61.3
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 7.2e-204 714.5 572 62.1
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 1.2e-203 713.8 584 61.0
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 1.2e-203 713.8 569 61.3
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 1.6e-203 713.4 569 60.8
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 2.7e-203 712.6 581 61.6
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 6.1e-203 711.4 584 61.0
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 6.1e-203 711.4 576 60.9
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 7.9e-203 711.1 572 61.0
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 1.0e-202 710.7 588 60.9
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 1.4e-202 710.3 587 58.8
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 1.4e-202 710.3 567 61.6
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 1.8e-202 709.9 578 60.6
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 2.3e-202 709.5 577 61.0
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 3.0e-202 709.1 577 60.7
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 6.7e-202 708.0 576 61.1
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 8.8e-202 707.6 580 59.1
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 8.8e-202 707.6 580 60.9
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 8.8e-202 707.6 568 60.9
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 1.1e-201 707.2 569 61.9
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 3.3e-201 705.7 576 60.1
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 3.3e-201 705.7 571 61.8
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 3.3e-201 705.7 569 61.0
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 4.4e-201 705.3 580 58.8
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 4.4e-201 705.3 570 60.9
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 5.7e-201 704.9 571 60.8
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 5.7e-201 704.9 575 60.5
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 9.7e-201 704.1 571 61.3
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 1.3e-200 703.7 580 58.6
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 3.7e-200 702.2 570 61.8
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 3.7e-200 702.2 574 59.9
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 7.0e-199 698.0 571 59.5
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 4.5e-198 695.3 576 61.3
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 5.9e-198 694.9 599 57.8
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 7.7e-198 694.5 572 60.1
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 1.3e-197 693.7 566 60.4
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.3e-197 693.7 566 60.4
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 1.3e-197 693.7 569 59.9
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 1.7e-197 693.3 572 60.3
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 5.0e-197 691.8 566 60.4
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.9e-196 689.9 566 60.2
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 2.5e-196 689.5 577 61.0
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 2.7e-195 686.0 575 60.2
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 2.7e-195 686.0 575 61.2
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 4.7e-195 685.3 610 56.6
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.0e-194 682.6 566 59.9
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 8.8e-194 681.0 577 59.4
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 8.8e-194 681.0 573 59.5
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 8.8e-194 681.0 577 58.9
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 4.4e-193 678.7 579 59.8
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 3.7e-192 675.6 657 53.0
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 6.3e-192 674.9 578 59.0
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 6.3e-192 674.9 578 59.0
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 4.1e-191 672.2 575 59.7
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 7.0e-191 671.4 572 59.8
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 7.0e-191 671.4 529 62.0
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 8.5e-189 664.5 568 59.3
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 2.5e-188 662.9 572 59.6
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 2.5e-188 662.9 547 59.2
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 6.8e-186 654.8 528 61.7
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 9.1e-183 644.4 527 60.3
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 4.4e-177 625.5 582 57.6
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 1.7e-173 613.6 571 55.2
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 1.7e-173 613.6 545 57.8
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 1.1e-172 610.9 572 55.8
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 2.6e-169 599.7 577 54.8
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 2.7e-166 589.7 585 53.7
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 1.2e-163 580.9 589 52.6
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 7.5e-161 571.6 597 50.8
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 8.9e-154 548.1 576 50.7
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 1.9e-143 513.8 468 57.3
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 6.6e-125 452.2 374 57.8
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 7.2e-103 379.0 255 68.6
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 6.9e-98 362.5 516 42.1
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 3.8e-80 303.5 210 66.7
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 2.3e-61 241.1 182 67.0
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 4.4e-44 183.7 172 55.8
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 2.9e-43 181.0 112 72.3
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 1.2e-41 175.6 195 46.2
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 2.5e-23 114.8 98 56.1
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 9.6e-23 112.8 78 66.7
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 4.7e-22 110.5 134 42.5
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 1.4e-21 109.0 80 65.0
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 4.4e-20 104.0 64 70.3
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 1.8e-13 82.0 62 62.9
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 3.4e-12 77.8 36 91.7
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 9.3e-10 69.7 43 72.1
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 1.5e-07 62.4 48 60.4
Zm00001eb027230 Zea mays HOM05D006696 ORTHO05D008683 8.1e-06 56.6 61 52.5


User provided reference genes

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