Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0041G009 Amborella trichopoda HOM05D000004 ORTHO05D000002 4.9e-31 137.1 67 100.0
Rhsim10G0189700 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.1e-09 66.2 65 49.2
CSS0013920 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-09 65.9 65 49.2
CSS0006424 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.3e-09 63.9 65 47.7
CSS0034382 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.3e-09 63.9 65 47.7
CSS0009193 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.9e-09 63.5 65 44.6
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 4.5e-08 60.8 65 44.6
QL04p041450 Quercus lobata HOM05D000004 ORTHO05D000002 4.5e-08 60.8 65 44.6
QL05p016549 Quercus lobata HOM05D000004 ORTHO05D000002 4.5e-08 60.8 65 44.6
QL05p055474 Quercus lobata HOM05D000004 ORTHO05D000002 4.5e-08 60.8 65 44.6
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 4.5e-08 60.8 65 44.6
Rhsim01G0086500 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.0e-07 59.7 65 47.7
Sopen04g020730 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-07 58.9 61 44.3
Sopen07g017950 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-07 58.9 61 44.3
Sopen10g005990 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-07 58.9 61 44.3
Sopen11g019750 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-07 58.9 61 44.3
Sopen11g021550 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-07 58.9 61 44.3
Sopen12g017890 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-07 58.9 61 44.3
Sopen04g026810 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-07 58.5 61 44.3
Sopen08g005590 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-07 58.5 61 44.3
Sopen02g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-07 58.2 61 44.3
Sopen03g033370 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-07 58.2 61 44.3
Sopen05g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-07 58.2 61 44.3
Sopen05g026540 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-07 58.2 61 44.3
Sopen07g017800 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-07 58.2 61 44.3
Sopen07g025250 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-07 58.2 61 44.3
Sopen11g013950 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-07 58.2 61 44.3
Sopen12g024530 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-07 58.2 61 44.3
CSS0010412 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.8e-07 57.8 65 44.6
Rhsim02G0166800 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.8e-07 57.8 60 46.7
Sopen09g009570 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-07 57.4 61 44.3
Sopen03g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 6.5e-07 57.0 61 44.3
CSS0037139 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.4e-07 56.6 65 44.6
Sopen02g010330 Solanum pennellii HOM05D000004 ORTHO05D000002 8.4e-07 56.6 61 42.6
Sopen07g011130 Solanum pennellii HOM05D000004 ORTHO05D000002 8.4e-07 56.6 61 42.6
Atru.chr8.282 Acer truncatum HOM05D000004 ORTHO05D000002 1.1e-06 56.2 65 43.1
CSS0004339 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-06 56.2 64 45.3
Sopen09g025530 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-06 56.2 61 42.6
Sopen01g010650 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-06 55.8 61 41.0
Sopen05g009900 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-06 55.8 61 41.0
Sopen05g021280 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-06 55.8 61 41.0
CSS0040213 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.5e-06 55.1 44 59.1
AUR62035181 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.5e-06 55.1 65 41.5
Sopen04g014160 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-06 55.1 61 41.0
Sopen04g024190 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-06 55.1 61 41.0
RhsimMtG0001900 Rhododendron simsii HOM05D004291 ORTHO05D005620 3.2e-06 54.7 44 59.1
Sopen06g005960 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-06 54.7 60 41.7
Sopen04g014770 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-06 54.3 61 41.0
RcHm_v2.0_Chr4g0401341 Rosa chinensis HOM05D000004 ORTHO05D000002 5.5e-06 53.9 44 56.8
RcHm_v2.0_Chr7g0200201 Rosa chinensis HOM05D000004 ORTHO05D000002 5.5e-06 53.9 44 56.8
Sopen09g023470 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-06 53.9 65 41.5
Sopen08g017070 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-06 53.5 61 42.6
FvH4_2g35961 Fragaria vesca HOM05D000004 ORTHO05D000002 9.3e-06 53.1 44 56.8
FvH4_4g13904 Fragaria vesca HOM05D000004 ORTHO05D000002 9.3e-06 53.1 44 56.8
FvH4_6g15221 Fragaria vesca HOM05D000004 ORTHO05D000002 9.3e-06 53.1 44 56.8


User provided reference genes

Program Settings