Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0037G072 Amborella trichopoda HOM05D004740 ORTHO05D066598 3.2e-44 181.4 94 100.0
TAR623G0659 Trochodendron aralioides HOM05D004740 ORTHO05D005991 5.5e-12 74.3 93 49.5
Nn2g13251 Nelumbo nucifera HOM05D004740 ORTHO05D005991 1.5e-09 66.2 92 45.7
FvH4_3g39690 Fragaria vesca HOM05D004740 ORTHO05D005991 2.5e-09 65.5 55 63.6
FAN11G1726 Fragaria x ananassa HOM05D004740 ORTHO05D005991 2.5e-09 65.5 55 63.6
Nn2g10995 Nelumbo nucifera HOM05D004740 ORTHO05D005991 3.3e-09 65.1 92 43.5
FAN16G0900 Fragaria x ananassa HOM05D004740 ORTHO05D005991 4.3e-09 64.7 55 61.8
Dinv28694 Davidia involucrata HOM05D004740 ORTHO05D005991 5.7e-09 64.3 94 42.6
FAN21G3316 Fragaria x ananassa HOM05D004740 ORTHO05D005991 5.7e-09 64.3 72 54.2
FAN21G3649 Fragaria x ananassa HOM05D004740 ORTHO05D005991 5.7e-09 64.3 72 54.2
RcHm_v2.0_Chr5g0071571 Rosa chinensis HOM05D004740 ORTHO05D005991 1.3e-08 63.2 55 60.0
PSO339G6109 Papaver somniferum HOM05D004740 ORTHO05D005991 2.2e-08 62.4 92 42.4
EL10Ac7g15913 Beta vulgaris HOM05D004740 ORTHO05D005991 2.8e-08 62.0 78 43.6
FAN25G0671 Fragaria x ananassa HOM05D004740 ORTHO05D005991 6.3e-08 60.8 55 60.0
PSO801G0690 Papaver somniferum HOM05D004740 ORTHO05D005991 1.1e-07 60.1 104 40.4
CANSAT54G2578 Cannabis sativa HOM05D004740 ORTHO05D005991 1.8e-07 59.3 88 43.2
Cfa011772 Carpinus fangiana HOM05D004740 ORTHO05D005991 2.4e-07 58.9 37 70.3
Haze_24407 Corylus avellana HOM05D004740 ORTHO05D005991 2.4e-07 58.9 37 70.3
HanXRQChr01g0012161 Helianthus annuus HOM05D004740 ORTHO05D005991 2.4e-07 58.9 90 41.1
Sp4g12790 Schrenkiella parvula HOM05D004740 ORTHO05D005991 3.1e-07 58.5 91 40.7
ClCG03G000380 Citrullus lanatus HOM05D004740 ORTHO05D005991 4.1e-07 58.2 52 55.8
CsaV3_1G036540 Cucumis sativus L. HOM05D004740 ORTHO05D005991 5.3e-07 57.8 60 51.7
TWI75G0989 Tripterygium wilfordii HOM05D004740 ORTHO05D005991 5.3e-07 57.8 95 40.0
AUR62009675 Chenopodium quinoa HOM05D004740 ORTHO05D005991 6.9e-07 57.4 62 45.2
Thhalv10016751m.g Eutrema salsugineum HOM05D004740 ORTHO05D005991 9.1e-07 57.0 37 70.3
HanXRQChr01g0012131 Helianthus annuus HOM05D004740 ORTHO05D005991 9.1e-07 57.0 89 39.3
CSS0045632 Camellia sinensis var. sinensis HOM05D004740 ORTHO05D005991 1.2e-06 56.6 58 50.0
COL.COLO4_11143 Corchorus olitorius HOM05D004740 ORTHO05D005991 1.2e-06 56.6 36 72.2
MELO3C020514.2 Cucumis melo HOM05D004740 ORTHO05D005991 1.5e-06 56.2 60 48.3
Gohir.A03G025700 Gossypium hirsutum HOM05D004740 ORTHO05D005991 1.5e-06 56.2 36 72.2
Gorai.003G150000 Gossypium raimondii HOM05D004740 ORTHO05D005991 1.5e-06 56.2 36 72.2
Lsat_1_v5_gn_5_174621 Lactuca sativa HOM05D004740 ORTHO05D005991 1.5e-06 56.2 84 41.7
MBI05_g35601_MAGBIO Magnolia biondii HOM05D004740 ORTHO05D005991 2.0e-06 55.8 75 44.0
MD11G1056800 Malus domestica HOM05D004740 ORTHO05D005991 2.6e-06 55.5 76 42.1
Sed0001589 Sechium edule HOM05D004740 ORTHO05D005991 3.4e-06 55.1 53 52.8
vmacro02923 Vaccinium macrocarpon HOM05D004740 ORTHO05D005991 3.4e-06 55.1 93 41.9
Ah.15g096090 Amaranthus hybridus HOM05D004740 ORTHO05D005991 4.5e-06 54.7 72 38.9
BolC4t23568H Brassica oleracea HOM05D004740 ORTHO05D005991 5.9e-06 54.3 38 60.5
AUR62001878 Chenopodium quinoa HOM05D004740 ORTHO05D005991 5.9e-06 54.3 62 41.9
Gohir.D03G142800 Gossypium hirsutum HOM05D004740 ORTHO05D005991 5.9e-06 54.3 36 69.4
Thecc.09G357100 Theobroma cacao HOM05D004740 ORTHO05D005991 5.9e-06 54.3 36 69.4


User provided reference genes

Program Settings