Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0037G053 Amborella trichopoda HOM05D004959 ORTHO05D005961 0.0e+00 2365.1 1187 100.0
MBI07_g42017_MAGBIO Magnolia biondii HOM05D004959 ORTHO05D005961 8.4e-267 924.5 1272 44.4
GSVIVG01032944001 Vitis vinifera HOM05D004959 ORTHO05D005961 2.1e-217 760.4 1213 39.3
Aqoxy5G03195 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 1.3e-214 751.1 1208 38.8
Aqoxy3G03508 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 5.3e-213 745.7 1208 38.7
Dinv04263 Davidia involucrata HOM05D004959 ORTHO05D005961 1.0e-211 741.5 1213 39.9
Nn3g21093 Nelumbo nucifera HOM05D004959 ORTHO05D005961 1.3e-211 741.1 1223 40.1
Dinv06304 Davidia involucrata HOM05D004959 ORTHO05D005961 1.5e-210 737.6 1216 39.9
SEGI_31831 Sequoiadendron giganteum HOM05D004959 ORTHO05D005961 1.4e-208 731.1 1249 37.6
Cfa000659 Carpinus fangiana HOM05D004959 ORTHO05D005961 3.1e-205 719.9 1214 38.1
Cpa.g.sc30.122 Carica papaya HOM05D004959 ORTHO05D005961 2.3e-203 713.8 1202 37.7
Potri.018G118800 Populus trichocarpa HOM05D004959 ORTHO05D005961 2.0e-199 700.7 1223 37.0
PSO017G0156 Papaver somniferum HOM05D004959 ORTHO05D005961 2.8e-198 696.8 1221 37.9
Sabra18G0102400 Salix brachista HOM05D004959 ORTHO05D005961 1.8e-197 694.1 1217 36.6
QL04p014830 Quercus lobata HOM05D004959 ORTHO05D005961 2.7e-196 690.3 1219 37.7
Thecc.02G004800 Theobroma cacao HOM05D004959 ORTHO05D005961 2.3e-195 687.2 1206 36.4
TWI63G1138 Tripterygium wilfordii HOM05D004959 ORTHO05D005961 2.3e-195 687.2 1224 38.3
QL04p014466 Quercus lobata HOM05D004959 ORTHO05D005961 2.9e-195 686.8 1219 37.4
PSO478G1937 Papaver somniferum HOM05D004959 ORTHO05D005961 4.3e-194 682.9 1217 37.0
TAR622G1187 Trochodendron aralioides HOM05D004959 ORTHO05D005961 6.1e-193 679.1 1059 40.7
Manes.16G050600 Manihot esculenta HOM05D004959 ORTHO05D005961 2.4e-189 667.2 1217 35.8
Prupe.3G104300 Prunus persica HOM05D004959 ORTHO05D005961 1.3e-187 661.4 1218 36.9
FvH4_4g05080 Fragaria vesca HOM05D004959 ORTHO05D005961 2.3e-187 660.6 1211 36.3
Rhsim02G0134800 Rhododendron simsii HOM05D004959 ORTHO05D005961 6.6e-187 659.1 1211 37.4
FAN12G3376 Fragaria x ananassa HOM05D004959 ORTHO05D005961 1.8e-184 651.0 1220 36.0
Hma1.2p1_0137F.1_g062550 Hydrangea macrophylla HOM05D004959 ORTHO05D005961 4.0e-184 649.8 1208 35.9
Gohir.D12G047700 Gossypium hirsutum HOM05D004959 ORTHO05D005961 5.4e-181 639.4 1219 35.5
Rhsim01G0101500 Rhododendron simsii HOM05D004959 ORTHO05D005961 9.2e-181 638.6 1229 36.6
vmacro15931 Vaccinium macrocarpon HOM05D004959 ORTHO05D005961 2.3e-179 634.0 1236 35.8
Gorai.008G050400 Gossypium raimondii HOM05D004959 ORTHO05D005961 6.6e-179 632.5 1252 35.0
Gohir.A12G049000 Gossypium hirsutum HOM05D004959 ORTHO05D005961 2.1e-177 627.5 1244 35.2
RcHm_v2.0_Chr4g0396011 Rosa chinensis HOM05D004959 ORTHO05D005961 2.8e-177 627.1 1202 35.9
FAN22G0965 Fragaria x ananassa HOM05D004959 ORTHO05D005961 3.1e-176 623.6 1206 35.5
HPP92_024644 Vanilla planifolia HOM05D004959 ORTHO05D005961 5.2e-176 622.9 1211 34.8
MD13G1224700 Malus domestica HOM05D004959 ORTHO05D005961 6.8e-176 622.5 1198 35.0
Lj3A850G96 Lonicera japonica HOM05D004959 ORTHO05D005961 4.9e-174 616.3 1236 36.2
Sed0018634 Sechium edule HOM05D004959 ORTHO05D005961 3.2e-173 613.6 1230 35.1
Actinidia07601 Actinidia chinensis HOM05D004959 ORTHO05D005961 9.2e-173 612.1 1209 35.5
Sc10g0002790 Simmondsia chinensis HOM05D004959 ORTHO05D005961 2.3e-171 607.4 1209 35.1
FAN17G1136 Fragaria x ananassa HOM05D004959 ORTHO05D005961 1.9e-170 604.4 1204 34.6
Duzib248G0683 Durio zibethinus HOM05D004959 ORTHO05D005961 3.3e-170 603.6 1139 35.9
ClCG09G011850 Citrullus lanatus HOM05D004959 ORTHO05D005961 4.0e-168 596.7 1221 35.8
Glyma.19G032700 Glycine max HOM05D004959 ORTHO05D005961 1.2e-167 595.1 1200 34.6
PGR142G3977 Punica granatum HOM05D004959 ORTHO05D005961 3.4e-167 593.6 1218 34.2
COL.COLO4_18025 Corchorus olitorius HOM05D004959 ORTHO05D005961 4.9e-166 589.7 1208 34.0
CsaV3_5G015760 Cucumis sativus L. HOM05D004959 ORTHO05D005961 1.4e-165 588.2 1227 35.0
PGSC0003DMG400003329 Solanum tuberosum HOM05D004959 ORTHO05D005961 7.8e-164 582.4 1221 33.0
MELO3C026444.2 Cucumis melo HOM05D004959 ORTHO05D005961 1.3e-163 581.6 1232 35.3
Sopen02g014720 Solanum pennellii HOM05D004959 ORTHO05D005961 3.6e-161 573.5 1223 33.2
CANSAT25G2352 Cannabis sativa HOM05D004959 ORTHO05D005961 4.7e-161 573.2 1217 34.1
Cc04_g10880 Coffea canephora HOM05D004959 ORTHO05D005961 1.1e-160 572.0 1229 33.5
Nitab4.5_0000036g0080 Nicotiana tabacum HOM05D004959 ORTHO05D005961 3.4e-159 567.0 1236 33.0
Solyc02g064590.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 5.8e-159 566.2 1223 32.8
Solyc02g064620.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 5.8e-159 566.2 1223 32.8
Phvul.004G026300 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 2.9e-158 563.9 1211 34.8
Nitab4.5_0010326g0010 Nicotiana tabacum HOM05D004959 ORTHO05D005961 4.9e-158 563.1 1206 33.3
VMungo0464G0163 Vigna mungo HOM05D004959 ORTHO05D005961 6.4e-158 562.8 1209 34.7
EL10Ac2g04300 Beta vulgaris HOM05D004959 ORTHO05D005961 8.4e-158 562.4 1208 33.4
Eucgr.I01567 Eucalyptus grandis HOM05D004959 ORTHO05D005961 1.1e-157 562.0 1214 33.8
Aqoxy7G01840 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 1.6e-156 558.1 1022 36.6
CiPaw.10G061900 Carya illinoinensis HOM05D004959 ORTHO05D005961 6.6e-155 552.7 1030 37.7
CARHR226870 Cardamine hirsuta HOM05D004959 ORTHO05D005961 2.6e-151 540.8 1210 32.8
Haze_06165 Corylus avellana HOM05D004959 ORTHO05D005961 5.8e-151 539.7 1164 33.9
Migut.E00705 Erythranthe guttata HOM05D004959 ORTHO05D005961 5.8e-151 539.7 1215 33.0
AT4G20060 Arabidopsis thaliana HOM05D004959 ORTHO05D005961 9.9e-151 538.9 1207 32.5
AL7G33790 Arabidopsis lyrata HOM05D004959 ORTHO05D005961 1.3e-150 538.5 1204 32.2
ECA233G2209 Erigeron canadensis HOM05D004959 ORTHO05D005961 3.8e-150 537.0 1198 33.0
HanXRQChr12g0366411 Helianthus annuus HOM05D004959 ORTHO05D005961 1.4e-149 535.0 1209 31.8
AUR62022971 Chenopodium quinoa HOM05D004959 ORTHO05D005961 1.9e-149 534.6 1209 31.8
BolC1t01373H Brassica oleracea HOM05D004959 ORTHO05D005961 5.4e-149 533.1 1214 32.7
AUR62012329 Chenopodium quinoa HOM05D004959 ORTHO05D005961 1.6e-148 531.6 1207 32.1
BcaNung06192 Brassica carinata HOM05D004959 ORTHO05D005961 4.3e-146 523.5 1207 32.3
C01p14060 Brassica napus HOM05D004959 ORTHO05D005961 5.6e-146 523.1 1213 32.4
DCAR_026905 Daucus carota HOM05D004959 ORTHO05D005961 3.7e-145 520.4 1211 33.0
Thhalv10024260m.g Eutrema salsugineum HOM05D004959 ORTHO05D005961 1.8e-144 518.1 1212 31.4
Oeu021359.1 Olea europaea HOM05D004959 ORTHO05D005961 9.0e-144 515.8 1225 32.7
BraA01t01128Z Brassica rapa HOM05D004959 ORTHO05D005961 2.0e-143 514.6 1205 32.0
Carub.0007s2107 Capsella rubella HOM05D004959 ORTHO05D005961 9.9e-143 512.3 1208 31.5
Migut.E00612 Erythranthe guttata HOM05D004959 ORTHO05D005961 4.9e-142 510.0 1214 31.9
Zm00001eb126950 Zea mays HOM05D004959 ORTHO05D005961 6.0e-140 503.1 1246 30.3
Sp7g18520 Schrenkiella parvula HOM05D004959 ORTHO05D005961 3.0e-139 500.7 1217 31.3
Aa31LG6G2470 Aethionema arabicum HOM05D004959 ORTHO05D005961 1.6e-137 495.0 1209 30.4
Atru.chr8.666 Acer truncatum HOM05D004959 ORTHO05D005961 1.1e-133 482.3 1001 33.9
A01p11860 Brassica napus HOM05D004959 ORTHO05D005961 7.9e-132 476.1 1205 31.0
SGA_v2.0_scaffold36G14263 Striga asiatica HOM05D004959 ORTHO05D005961 1.1e-130 472.2 1213 30.8
Lsat_1_v5_gn_8_33541 Lactuca sativa HOM05D004959 ORTHO05D005961 8.2e-129 466.1 1191 30.3
MD16G1229900 Malus domestica HOM05D004959 ORTHO05D005961 3.1e-128 464.2 1075 32.6
Ah.09g226960 Amaranthus hybridus HOM05D004959 ORTHO05D005961 1.7e-126 458.4 1216 30.2
HanXRQChr04g0121291 Helianthus annuus HOM05D004959 ORTHO05D005961 1.0e-123 449.1 1158 29.7
SGA_v2.0_scaffold99G29470 Striga asiatica HOM05D004959 ORTHO05D005961 2.6e-119 434.5 1196 30.4
Ciclev10014195m.g Citrus clementina HOM05D004959 ORTHO05D005961 2.7e-116 424.5 966 32.3
Pp3c21_2460 Physcomitrium patens HOM05D004959 ORTHO05D005961 4.4e-114 417.2 1278 28.3
Glyma.13G054500 Glycine max HOM05D004959 ORTHO05D005961 7.4e-106 389.8 1008 30.7
Mapoly0306s0002 Marchantia polymorpha HOM05D004959 ORTHO05D005961 5.3e-104 383.6 1285 27.8
CSS0032692 Camellia sinensis var. sinensis HOM05D004959 ORTHO05D005961 2.6e-98 364.8 940 31.1
AagrBONN_evm.TU.Sc2ySwM_228.5373 Anthoceros agrestis HOM05D004959 ORTHO05D005961 8.0e-92 343.2 1169 28.1
Hma1.2p1_0286F.1_g114200 Hydrangea macrophylla HOM05D004959 ORTHO05D005961 1.1e-88 332.8 658 33.6
Peaxi162Scf00449g00320 Petunia axillaris HOM05D004959 ORTHO05D005961 9.1e-88 329.7 950 28.8
PSO161G0046 Papaver somniferum HOM05D004959 ORTHO05D005961 2.0e-79 302.0 853 30.4
SHI28141 Sapria himalayana HOM05D004959 ORTHO05D005961 1.5e-77 295.8 948 29.0
Psat7g167160 Pisum sativum HOM05D004959 ORTHO05D005961 9.5e-77 293.1 299 52.5
LjContig00564g0005645 Lotus japonicus HOM05D004959 ORTHO05D005961 4.7e-76 290.8 299 51.8
Medtr4g078330 Medicago truncatula HOM05D004959 ORTHO05D005961 6.1e-76 290.4 299 52.2
CAN.G370.71 Capsicum annuum HOM05D004959 ORTHO05D005961 2.3e-75 288.5 389 42.4
LjContig00564g0002415 Lotus japonicus HOM05D004959 ORTHO05D005961 4.4e-74 284.3 299 51.2
Ca_18944_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 5.8e-74 283.9 300 51.0
Lalb_Chr19g0135221 Lupinus albus HOM05D004959 ORTHO05D005961 1.4e-72 279.3 302 49.0
CDE04G1301 Ceratophyllum demersum HOM05D004959 ORTHO05D005961 7.5e-66 256.9 421 37.8
Lj3g0004583 Lotus japonicus HOM05D004959 ORTHO05D005961 4.1e-64 251.1 299 47.2
CDE04G0396 Ceratophyllum demersum HOM05D004959 ORTHO05D005961 5.4e-64 250.8 235 54.5
Peaxi162Scf00449g00321 Petunia axillaris HOM05D004959 ORTHO05D005961 5.1e-62 244.2 274 48.5
Oeu021362.1 Olea europaea HOM05D004959 ORTHO05D005961 2.9e-57 228.4 431 34.1
CSS0018526 Camellia sinensis var. sinensis HOM05D004959 ORTHO05D005961 1.9e-56 225.7 235 50.6
arahy.Tifrunner.gnm1.ann1.WXF40H Arachis hypogaea HOM05D004959 ORTHO05D005961 1.1e-51 209.9 305 39.0
arahy.Tifrunner.gnm1.ann1.C6XSUD Arachis hypogaea HOM05D004959 ORTHO05D005961 6.8e-51 207.2 305 38.7
PSO478G4754 Papaver somniferum HOM05D004959 ORTHO05D005961 2.0e-50 205.7 183 56.3
SMO111G0127 Selaginella moellendorffii HOM05D004959 ORTHO05D005961 4.2e-48 198.0 396 33.6
BcaB03g11657 Brassica carinata HOM05D004959 ORTHO05D005961 4.3e-45 188.0 364 36.0
CBR_g16049 Chara braunii HOM05D004959 ORTHO05D005961 5.6e-45 187.6 415 31.6
unitig_46.g18488 Utricularia gibba HOM05D004959 ORTHO05D005961 1.6e-44 186.0 406 32.8
LjContig00564g0005363 Lotus japonicus HOM05D004959 ORTHO05D005961 4.8e-44 184.5 175 55.4
Phvul.005G124450 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 5.8e-42 177.6 174 54.6
Atru.chr8.667 Acer truncatum HOM05D004959 ORTHO05D005961 1.3e-41 176.4 175 53.7
TPR.G23000 Trifolium pratense HOM05D004959 ORTHO05D005961 1.9e-40 172.6 167 54.5
SHI28139 Sapria himalayana HOM05D004959 ORTHO05D005961 2.1e-39 169.1 175 50.9
Aqoxy5G03191 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 6.0e-39 167.5 521 28.8
BcaNung06193 Brassica carinata HOM05D004959 ORTHO05D005961 5.4e-32 144.4 187 43.3
Os01g0188200 Oryza sativa ssp. japonica HOM05D004959 ORTHO05D005961 2.5e-29 135.6 233 35.6
Psat2g088000 Pisum sativum HOM05D004959 ORTHO05D005961 1.6e-28 132.9 127 54.3
CDE04G2317 Ceratophyllum demersum HOM05D004959 ORTHO05D005961 7.9e-23 114.0 478 26.8
Atru.chr10.384 Acer truncatum HOM05D004959 ORTHO05D005961 4.8e-20 104.8 224 33.9
Aqoxy5G03189 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 8.2e-20 104.0 223 31.4
Ca_14573_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 5.8e-18 97.8 124 46.0
Phvul.005G124551 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 1.0e-17 97.1 286 30.1
Ca_14572_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 1.1e-16 93.6 125 45.6
TPR.G940 Trifolium pratense HOM05D004959 ORTHO05D005961 1.9e-16 92.8 108 45.4
Ca_14567_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 3.3e-13 82.0 88 52.3
BolC3t20557H Brassica oleracea HOM05D000005 ORTHO05D000449 1.2e-10 73.6 103 40.8
C03p82750 Brassica napus HOM05D000005 ORTHO05D000449 1.5e-10 73.2 79 43.0
BcaC01g00655 Brassica carinata HOM05D004959 ORTHO05D005961 4.5e-10 71.6 129 37.2
SHI28140 Sapria himalayana HOM05D004959 ORTHO05D005961 7.2e-08 64.3 63 52.4
Os01g0103700 Oryza sativa ssp. japonica HOM05D004959 ORTHO05D005961 1.8e-06 59.7 132 29.5
Phvul.005G124501 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 6.7e-06 57.8 353 24.9


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