Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0037G046 Amborella trichopoda HOM05D004036 ORTHO05D004576 1.7e-114 416.0 206 100.0
TAR624G0048 Trochodendron aralioides HOM05D004036 ORTHO05D004576 7.5e-14 81.6 218 33.9
TAR626G0352 Trochodendron aralioides HOM05D004036 ORTHO05D004576 4.9e-13 79.0 206 32.0
Lsat_1_v5_gn_3_108141 Lactuca sativa HOM05D004036 ORTHO05D004576 2.4e-12 76.6 172 35.5
MBI01_g10034_MAGBIO Magnolia biondii HOM05D004036 ORTHO05D004576 3.5e-11 72.8 207 30.0
Phvul.001G055700 Phaseolus vulgaris HOM05D004036 ORTHO05D004576 3.5e-11 72.8 207 30.9
QL02p086217 Quercus lobata HOM05D004036 ORTHO05D004576 4.6e-11 72.4 197 30.5
VMungo0647G1622 Vigna mungo HOM05D004036 ORTHO05D004576 1.7e-10 70.5 207 30.9
Oeu045176.1 Olea europaea HOM05D004036 ORTHO05D004576 2.3e-10 70.1 207 31.9
Psat6g031000 Pisum sativum HOM05D004036 ORTHO05D004576 3.0e-10 69.7 199 29.6
Manes.16G068200 Manihot esculenta HOM05D004036 ORTHO05D004576 3.9e-10 69.3 206 31.1
Duzib187G1985 Durio zibethinus HOM05D004036 ORTHO05D004576 5.0e-10 68.9 206 33.0
Nn2g11835 Nelumbo nucifera HOM05D004036 ORTHO05D004576 5.0e-10 68.9 157 31.8
Nn8g39276 Nelumbo nucifera HOM05D004036 ORTHO05D004576 5.0e-10 68.9 152 30.9
Medtr1g011280 Medicago truncatula HOM05D004036 ORTHO05D004576 6.6e-10 68.6 201 28.9
Eucgr.C01818 Eucalyptus grandis HOM05D004036 ORTHO05D004576 1.5e-09 67.4 199 29.1
Atru.chr7.2325 Acer truncatum HOM05D004036 ORTHO05D004576 1.9e-09 67.0 212 27.4
ClCG05G017210 Citrullus lanatus HOM05D004036 ORTHO05D004576 1.9e-09 67.0 209 33.5
Cfa013210 Carpinus fangiana HOM05D004036 ORTHO05D004576 4.3e-09 65.9 202 30.7
FvH4_2g30160 Fragaria vesca HOM05D004036 ORTHO05D004576 4.3e-09 65.9 201 31.8
FAN24G0425 Fragaria x ananassa HOM05D004036 ORTHO05D004576 4.3e-09 65.9 201 31.8
Glyma.17G203900 Glycine max HOM05D004036 ORTHO05D004576 4.3e-09 65.9 214 30.4
TPR.G20095 Trifolium pratense HOM05D004036 ORTHO05D004576 5.6e-09 65.5 200 31.0
Glyma.14G129200 Glycine max HOM05D004036 ORTHO05D004576 9.5e-09 64.7 206 29.6
Thecc.09G144100 Theobroma cacao HOM05D004036 ORTHO05D004576 9.5e-09 64.7 211 27.5
COL.COLO4_24066 Corchorus olitorius HOM05D004036 ORTHO05D004576 1.2e-08 64.3 200 30.5
FAN27G0504 Fragaria x ananassa HOM05D004036 ORTHO05D004576 1.6e-08 63.9 201 31.3
Ciclev10009480m.g Citrus clementina HOM05D004036 ORTHO05D004576 2.8e-08 63.2 200 33.0
Potri.006G246600 Populus trichocarpa HOM05D004036 ORTHO05D004576 2.8e-08 63.2 201 31.3
FAN20G2367 Fragaria x ananassa HOM05D004036 ORTHO05D004576 3.6e-08 62.8 201 31.3
ECA240G1837 Erigeron canadensis HOM05D004036 ORTHO05D004576 6.2e-08 62.0 179 33.5
Hma1.2p1_0175F.1_g077210 Hydrangea macrophylla HOM05D004036 ORTHO05D004576 6.2e-08 62.0 197 28.9
A04p20320 Brassica napus HOM05D000001 ORTHO05D004044 8.1e-08 61.6 165 30.3
Haze_21623 Corylus avellana HOM05D004036 ORTHO05D004576 8.1e-08 61.6 158 32.9
Lj5g0012132 Lotus japonicus HOM05D004036 ORTHO05D004576 1.1e-07 61.2 207 27.5
THA.LOC104815044 Tarenaya hassleriana HOM05D004036 ORTHO05D004576 1.1e-07 61.2 199 27.6
Aa31LG11G4630 Aethionema arabicum HOM05D004036 ORTHO05D004576 1.4e-07 60.8 187 29.4
FAN15G1681 Fragaria x ananassa HOM05D004036 ORTHO05D004576 1.4e-07 60.8 201 31.3
Thhalv10004997m.g Eutrema salsugineum HOM05D004036 ORTHO05D004576 1.8e-07 60.5 203 28.6
Gorai.010G053700 Gossypium raimondii HOM05D004036 ORTHO05D004576 1.8e-07 60.5 174 27.6
Prupe.1G466700 Prunus persica HOM05D004036 ORTHO05D004576 2.3e-07 60.1 200 31.0
BcaC02g08289 Brassica carinata HOM05D000001 ORTHO05D004044 3.1e-07 59.7 165 29.7
C04p56020 Brassica napus HOM05D000001 ORTHO05D004044 3.1e-07 59.7 165 29.7
BolC4t27135H Brassica oleracea HOM05D000001 ORTHO05D004044 3.1e-07 59.7 165 29.7
BraA04t17611Z Brassica rapa HOM05D000001 ORTHO05D004044 3.1e-07 59.7 165 29.7
CsaV3_3G046690 Cucumis sativus L. HOM05D004036 ORTHO05D004576 3.1e-07 59.7 208 31.7
Lsat_1_v5_gn_8_70460 Lactuca sativa HOM05D000001 ORTHO05D004044 4.0e-07 59.3 207 28.5
THA.LOC104799217 Tarenaya hassleriana HOM05D004036 ORTHO05D004576 4.0e-07 59.3 205 25.4
AT5G25540 Arabidopsis thaliana HOM05D004036 ORTHO05D004576 5.2e-07 58.9 205 25.9
TWI34G1922 Tripterygium wilfordii HOM05D004036 ORTHO05D004576 5.2e-07 58.9 176 30.7
CiPaw.08G015700 Carya illinoinensis HOM05D004036 ORTHO05D004576 6.8e-07 58.5 196 30.1
Gohir.A06G047900 Gossypium hirsutum HOM05D004036 ORTHO05D004576 6.8e-07 58.5 202 26.7
Sabra06G0192900 Salix brachista HOM05D004036 ORTHO05D004576 6.8e-07 58.5 200 31.5
DCAR_003061 Daucus carota HOM05D004036 ORTHO05D004576 8.9e-07 58.2 208 31.2
Cpa.g.sc91.6 Carica papaya HOM05D004036 ORTHO05D004576 1.2e-06 57.8 152 30.3
MELO3C003669.2 Cucumis melo HOM05D004036 ORTHO05D004576 1.2e-06 57.8 154 32.5
Duzib150G0431 Durio zibethinus HOM05D004036 ORTHO05D004576 1.5e-06 57.4 207 28.0
Gohir.D06G047900 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.5e-06 57.4 202 26.7
HanXRQChr13g0409481 Helianthus annuus HOM05D004036 ORTHO05D004576 1.5e-06 57.4 172 30.2
Gorai.009G011700 Gossypium raimondii HOM05D004036 ORTHO05D004576 2.0e-06 57.0 200 27.5
RcHm_v2.0_Chr6g0312751 Rosa chinensis HOM05D004036 ORTHO05D004576 2.0e-06 57.0 201 31.3
EL10Ac2g02537 Beta vulgaris HOM05D004036 ORTHO05D004576 2.6e-06 56.6 193 29.0
HanXRQChr03g0067161 Helianthus annuus HOM05D000001 ORTHO05D004044 2.6e-06 56.6 212 27.8
Nitab4.5_0006579g0060 Nicotiana tabacum HOM05D004036 ORTHO05D004576 3.4e-06 56.2 205 30.2
Gohir.D09G022200 Gossypium hirsutum HOM05D004036 ORTHO05D004576 4.4e-06 55.8 203 27.1
Manes.03G064800 Manihot esculenta HOM05D004036 ORTHO05D004576 4.4e-06 55.8 208 28.8
QL12p031289 Quercus lobata HOM05D004036 ORTHO05D004576 4.4e-06 55.8 200 27.5
Dinv35883 Davidia involucrata HOM05D004036 ORTHO05D004576 5.8e-06 55.5 115 36.5
Gohir.D05G011350 Gossypium hirsutum HOM05D004036 ORTHO05D004576 5.8e-06 55.5 203 27.1
Lalb_Chr23g0269031 Lupinus albus HOM05D004036 ORTHO05D004576 5.8e-06 55.5 195 28.7
BcaB06g28092 Brassica carinata HOM05D000001 ORTHO05D004044 7.5e-06 55.1 178 30.3
CAN.G117.2 Capsicum annuum HOM05D000001 ORTHO05D004044 7.5e-06 55.1 55 49.1
CARHR201790 Cardamine hirsuta HOM05D004036 ORTHO05D004576 7.5e-06 55.1 89 36.0
CiPaw.03G235800 Carya illinoinensis HOM05D004036 ORTHO05D004576 7.5e-06 55.1 205 27.3
Gohir.A05G010600 Gossypium hirsutum HOM05D004036 ORTHO05D004576 7.5e-06 55.1 200 27.5
Aa31LG3G15750 Aethionema arabicum HOM05D004036 ORTHO05D004576 9.9e-06 54.7 201 28.9
Gorai.008G052900 Gossypium raimondii HOM05D004036 ORTHO05D004576 9.9e-06 54.7 200 28.0
Hma1.2p1_0003F.1_g003650 Hydrangea macrophylla HOM05D004036 ORTHO05D004576 9.9e-06 54.7 172 34.3


User provided reference genes

Program Settings